Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,178,923 T→G 12.7% S35R (AGT→AGG)  yegT → nucleoside transporter, low affinity

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,178,9230TG12.7% 276.7 / 2.0 120S35R (AGT→AGG) yegTnucleoside transporter, low affinity
Reads supporting (aligned to +/- strand):  ref base T (63/35);  new base G (5/17);  total (68/52)
Fisher's exact test for biased strand distribution p-value = 6.12e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 120 total aligned reads displayed.

CGATTCATCAGAAAAAATGTTAGCGCGGTCAAGTTTTCACCGCAAAGGTATTTAAAAGGTATTATTAAGTGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTACTCGCTAACCTATATGCCGACCATTGCGC  >  NC_000913/2178700‑2179149
                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                          
cGATTCTTGAAAAAAAATGTTTGCGCGATAAGGTTTTCACCCCAAAGGTATTTAAAAGGTATTATTAAGGGGTATTGTCACCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATTATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGGGCCGGAGAAA‑TTGGc                                                                                                                                                                                                                            <  2:618904/239‑1 (MQ=255)
cGATTCATCAGAAAAAATGTTAGCGCGGTCAAGTTTTCACCGCAAAGGTATTTAAAAGGTATTATTAAGTGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGc                                                                                                                                                                                                                            <  1:450825/239‑1 (MQ=255)
cGATTCATCAAAAAAAATGTTAGCGCGGTCAAGTTTTCACCGCAAAGGTATTTAAAAGGTATTATTAAGTGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGc                                                                                                                                                                                                                            <  1:155073/239‑1 (MQ=255)
cGATTCATAAAAAAAAATGTTAGCGGGGTCAAGTTTTCACCGCAAAGGTATTTAAAAGGTATTATTAAGTGGGAGTGTCATCAGGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGc                                                                                                                                                                                                                            <  2:1085287/239‑1 (MQ=255)
      atcaGAAAAAATGTTAGCGCGGTCAAGTTTTCACCGCAAAGGTATTTAAAAGGTATTATTAAGTGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCg                                                                                                                                                                                                                     <  1:921031/239‑1 (MQ=255)
      atcaAAAAAAATTTTAGCCGGTTAAATTTTTCCCCGCAAAGGTATTTAAAAGGTATTATAAAGGGGTATTGGCAACGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCg                                                                                                                                                                                                                     <  2:819098/239‑1 (MQ=255)
                     aGCGCGGTCAAGTTTTCACCGCAAAGGTATTTAAAAGGTATTATTAAGTGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGGGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGGGAAA‑TTGGCT‑GGTGGTATGCCTGAACCg                                                                                                                                                                                                        >  2:1104444/1‑237 (MQ=255)
                                        cGCAAAGGTATTTAAAAGGTATTATTAAGTGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTATGGCCGGGGAAA‑TTGGAT‑GGTCGTTTTCCCTTCCCGCCCTTGCGCGCATCCTGTCg                                                                                                                                                                                    >  2:340414/1‑238 (MQ=255)
                                            agggTATTTAAAAGGTATTATTAAGGGGAATTGTCATCGCGTACCTTAAATTACCTGTCATGAAGGAATTAAAAGAGGAAAAC‑CCAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTTTTG‑AATGGTTTATCTGGGGCGCTTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAACCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAAtt                                                                                                                                                                              <  1:757900/237‑1 (MQ=255)
                                                  tttAAAAGGTATTATTAAGTGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGGGAAA‑TTGGCT‑GGTCGTATGCCTTTACCGCCTTTCCGGCGATCCGGTCGCCAATTCTGGt                                                                                                                                                                         >  2:798182/1‑239 (MQ=255)
                                                     taaaGTTTTTATTAAGGGGTTTTGTCATCGCGTACTTTACTTTCCCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTgg                                                                                                                                                                      <  2:1054776/238‑1 (MQ=255)
                                                     aaaaGGTATTATTAAGTGGTATGGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATTTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTgg                                                                                                                                                                      <  1:129512/239‑1 (MQ=255)
                                                         ggTATTATTAAGTGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTcc                                                                                                                                                                  >  1:588935/1‑239 (MQ=255)
                                                          gTATTATTAAGTGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTTTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTcc                                                                                                                                                                  >  1:142205/1‑238 (MQ=255)
                                                                    gTGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGAcc                                                                                                                                                      >  1:714608/1‑238 (MQ=255)
                                                                     tGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTACGTAAAAGCGGTTTTAGTGCCGGGGAAA‑TTGGCT‑GGACGTATGCTTGTACCGACATTGCGGCGATCCTGAGGCCAATTCTGGTTGGATCCATCCA‑CTGAc                                                                                                                                                       >  1:1033394/1‑237 (MQ=255)
                                                                     tGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTACGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGGCGTATGCCTGTAACGCCATTGCGGCAGACCTGGCGCCAATTTGGTTTGGCTCCAtaccagacc                                                                                                                                                        >  2:28153/1‑229 (MQ=255)
                                                                     tGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCg                                                                                                                                                                                                                                        <  1:696617/159‑1 (MQ=255)
                                                                     tGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCg                                                                                                                                                                                                                                        >  2:696617/1‑159 (MQ=255)
                                                                     tGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CC‑CTGAcc                                                                                                                                                      >  1:1212939/1‑237 (MQ=255)
                                                                     tGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGAcc                                                                                                                                                      >  1:913456/1‑237 (MQ=255)
                                                                     tGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGAcc                                                                                                                                                      >  1:118229/1‑237 (MQ=255)
                                                                     tGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGAGGCGACCCTGTCGCCAATTCTGGTTGGCTCCAT‑AA‑CTGAcc                                                                                                                                                      >  1:985266/1‑237 (MQ=255)
                                                                     tGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGGCGTATGCCTGTACCGCCATTGCTGCGATCCTGTCGCCAATTCTGGTTGGCTCCAA‑CC‑CTGACCGc                                                                                                                                                    >  2:166533/1‑239 (MQ=255)
                                                                     tGGTATTGTCATCGCGTACCTTACAGTACCTGGCATGAAGGAATTAAAAGATTAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCg                                                                                                                                                                                                                     <  2:874514/176‑1 (MQ=255)
                                                                      ggTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCt                                                                                                                                                   >  1:988579/1‑239 (MQ=255)
                                                                       gTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCtt                                                                                                                                                  >  1:447638/1‑239 (MQ=255)
                                                                          ttGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGTGGCGCTCCTGGGGCCAATTCTGGTTTGCTCCGT‑CC‑CTGACCCCtttt                                                                                                                                                >  2:946158/1‑238 (MQ=255)
                                                                          ttGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCtttt                                                                                                                                                >  1:1247483/1‑238 (MQ=255)
                                                                            gtctgcgcgTCCCTTACTTTACCTTTGAAGAAAGAATTAAAAGGTGAAAACAACAGAAAA‑GGT‑TTCGTTC‑ATGATTTTTTGTG‑AAGGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGTTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCGGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTtct                                                                                                                                             <  2:23278/234‑1 (MQ=255)
                                                                               aTCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGGTGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTGGGCTCCAT‑CA‑CTGACCCCTTTTTCTCgg                                                                                                                                          >  2:533622/1‑239 (MQ=255)
                                                                               aTCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCg                                                                                                                                           >  1:956641/1‑238 (MQ=255)
                                                                                 cgcgTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGgc                                                                                                                                         >  1:781724/1‑238 (MQ=255)
                                                                                  gcgTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGgcg‑c                                                                                                                                      >  1:70400/1‑239 (MQ=255)
                                                                                       ccTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTTGGCG‑Caaaaa                                                                                                                                 >  1:674629/1‑239 (MQ=255)
                                                                                                aCCGGTCAGGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCg                                                                                                                        <  1:1104444/239‑1 (MQ=255)
                                                                                                  cTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGGGCCGGGGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTTTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAAGGCTGgggga                                                                                                                      >  2:867050/1‑238 (MQ=255)
                                                                                                   tgtataaaaGTAATTAAAAGA‑GAAAACCAAAGGAAATGTT‑GTCGTTG‑ATTATTTTTTTGT‑AATGGTTTAGCGGGGGTGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTAAGTGCCGAAGAAA‑TTGGTT‑GGTGGTATGCTTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTa                                                                                                                     <  2:142205/232‑1 (MQ=255)
                                                                                                    gTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑Ca                                                                                                                                                             >  1:614847/1‑200 (MQ=255)
                                                                                                    gTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTAGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCCCTTTTTTTCGTCG‑CAAAAAGGGCTGggggggt                                                                                                                    >  2:699530/1‑236 (MQ=255)
                                                                                                     tCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGGGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCCCCAT‑CC‑CTGACCGCTTTTTCTCGGCG‑CCAAAAGGGCTGGGGGGAtt                                                                                                                   >  2:304341/1‑239 (MQ=255)
                                                                                                     tCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CCAAAAGTGCTGGCGGGAtt                                                                                                                   >  1:259180/1‑239 (MQ=255)
                                                                                                          aaGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGGGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTTCGGCGATCCTGTCGCCAATTTTGGTTGGCTCCAT‑AC‑CCGACCGCTTTTT‑TCAGCGCCAAAAAGGGCTGGGGGTGTTGATGt                                                                                                              >  2:1281534/1‑239 (MQ=255)
                                                                                                           aGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGGGCTGGCGGGCATGATGtt                                                                                                             >  2:504599/1‑239 (MQ=255)
                                                                                                               aTTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCCTTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTTACCCCTTTTTCTCGGCG‑CAAAAAgctccgcgggtattggatgtcgcc                                                                                                         >  2:1227187/1‑216 (MQ=255)
                                                                                                               aTTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGAATTGATGTTCGCa                                                                                                         >  1:709786/1‑239 (MQ=255)
                                                                                                               aTTAAAAGATGAAAACAACAGCAAA‑GAT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGGAAAAGCGGTTTTAGGGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTGTGGTTGGCTCCAT‑CC‑CTGACCGCTTTTTCTCGCCA‑GAAAAAGAGGTGGCGGTagtttggtgcgaa                                                                                                         >  2:1219507/1‑227 (MQ=255)
                                                                                                                   aaaGATGAAAACAACATAAAG‑GTG‑GTCGTTC‑ATTTTGTTTGTTG‑AATGGTTTAGCGGGGGCGGGTGGTTTGGGCCATGGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGgcg                                                                                                     <  2:259180/239‑1 (MQ=255)
                                                                                                                     ataTGAAAACAACAGAAAT‑GTT‑GTTTTTG‑TTTGTTTTTTGTG‑AGTGTTTTTTTTGGGGGGCGTGTTTGGGTCGTTTGTGGTT‑GGGGTTAAGTAAAAGGGGTTTTGAGGCGGGAGAAT‑TTGGTT‑GGTCGGATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGgcgcg                                                                                                   <  2:588935/237‑1 (MQ=255)
                                                                                                                     agtgaaaaaaaGCAGCAAG‑GCT‑GTCTTTC‑ATG‑TGTTTTTTGAAATGGTTTCTCTGGGGCGGGTGGTTTGGGCCATTGGGTTT‑GTGGTTAAGTAAAAGCGTTTTTAGGGCCGGAGAAA‑TTGCTT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGgcgcg                                                                                                   <  2:985266/234‑1 (MQ=255)
                                                                                                                        tGAAAACAAAAGCAAA‑GCT‑TGCGTCT‑ATGATGTTTGTTG‑AATGGTTTATCCGGGGCGCGTGGTTTGGCCCATTGTGGTT‑GTGTTTAAGTAAAGGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCTTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGgcgcgc                                                                                                  <  1:869765/237‑1 (MQ=255)
                                                                                                                          taaaaaaaagggaaggtt‑GTCTTTC‑TTTATTTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCAGTGTGGTT‑GGGGTTAAGTAAAGGCGGTTTTAGTGCCGGAGAAA‑TGGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCgctg                                                                                                <  2:279456/221‑1 (MQ=255)
                                                                                                                          gtccgcacccgaaa‑GCTCGTCGTTCTATG‑TGTTTTGTG‑AAGGGGTTACGTGGGGGGGGGTGTTTGGGCCATGGTGGTT‑GGGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGCCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCgctg                                                                                                <  2:302441/227‑1 (MQ=255)
                                                                                                                                 caGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCAGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCC‑T‑CACCTGACCGCTTTTTTTCGGCG‑CAAAAAGTGCTGGCGGTATTTATgctgcaccttatcaacctctccca                                                                                        >  1:141300/1‑215 (MQ=255)
                                                                                                                                    cAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGGATTGATGTTTGCAGGCGCGCGGCTG‑AGGT‑Agttt                                                                                  >  2:961215/1‑238 (MQ=255)
                                                                                                                                       a‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTTCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTGGGCG‑CAAAAAGTGCTGGCGGGTTTTATGTTCTCAGGCGGCCTGGTG‑GTGG‑ATTTCGc                                                                                >  1:405800/1‑238 (MQ=255)
                                                                                                                                          cT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CACAAAGTGCTGGCGGAATTGTTGTTTGCAGGCGCGCTGCTT‑TTGC‑Atttttgttt                                                                             >  1:302441/1‑233 (MQ=255)
                                                                                                                                           t‑GTCGTTC‑ATGGTTTTTGTTG‑AATGGTTTAGCTGGGGCGCGTGGTTTGGGCCTTTGTGGTG‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTgcg                                                                            <  1:504599/239‑1 (MQ=255)
                                                                                                                                               aggttcttttttttttttG‑ATTGTTTTATCTGGGGCGGTTGGTTTGGCCCTTTGTGGTT‑GTGGTTAATTAAAAGGGGTTTAGGGGCCGGAGAAA‑TTGGCT‑‑GTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCaa                                                                         <  2:1204347/227‑1 (MQ=255)
                                                                                                                                                      tgatgTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGCATTGAGGTTCCCAGGCGCACTGCTGTATGT‑Atttgctggtcccacaacc                                                                    >  2:107128/1‑224 (MQ=255)
                                                                                                                                                             tgttg‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGTTTGGCTCCAT‑CC‑CTGACCGCTTTTTCTCGGCG‑CAAAAATTGCTGGCGGGATTTTTGTTCTCCGGCGCGCGTCTG‑GTGG‑Attttcgtgggcaacgacacacctttg                                                            >  2:89521/1‑216 (MQ=255)
                                                                                                                                                             tgttg‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGGGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAAACCC‑Ctttt                                                            >  1:440372/1‑238 (MQ=255)
                                                                                                                                                             tgttg‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATCGTAGTTTGCAAGCGCGTCGCTG‑ATTG‑ATTTTCCCGCGCCACAGCACA‑Ccttt                                                            >  1:1090143/1‑238 (MQ=255)
                                                                                                                                                             tgttg‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑‑GTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑CTTTCGCTGCGCAACAGACCC‑Ctttttt                                                          >  1:1204347/1‑237 (MQ=255)
                                                                                                                                                             tgttg‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTACCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGGATTGATGGTCGGCGGCGGCGTGCTG‑CTTG‑TTTTTTCTGCGCCAAAAACCA‑Ctttt                                                            >  2:510394/1‑238 (MQ=255)
                                                                                                                                                             tgttg‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGGGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCCCCGGCGCGCTGCTG‑TTTG‑TTTTCGCTGCGGAACAGACCA‑Ctttt                                                            >  1:188305/1‑238 (MQ=255)
                                                                                                                                                                  gcaTGCTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTCAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCCATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGTG‑CAAACAGTGCTGGCGGGTTTGCTGTTTGCCGGGGGCCTGCGG‑ATGT‑ATTTGCCTgcgcgaacaaccccgttttccgg                                                        >  2:389939/3‑220 (MQ=255)
                                                                                                                                                                     tgttttttgtGGGGCGGTTGGTTTGTGCCTTTGGGTTT‑GTGGCTAAGAAAAAGGGGTTTTGTTGCCGGATAAG‑TTTGTT‑GTCCGTAGTCCTGCACCGCCCTGGCGGCGATCCTGTCGCCAATTCTGCTTGGCTCCAT‑CA‑CTGACCTCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGtt                                                    <  2:1374882/230‑1 (MQ=255)
                                                                                                                                                                     tGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGGGCCGGAGAAA‑TGGGCT‑GGTCGTATGCGTGTACCGCCATTGCGGCGAACCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGtt                                                    <  1:274305/239‑1 (MQ=255)
                                                                                                                                                                     gtgTTTGTGTGGGGGGGGGGGTTTGGGGCTTGGGGGTT‑GGGTTTAATGAAAAGGGGTTGTAGGGCCGGAGAAA‑TGGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGtt                                                    <  2:1092099/237‑1 (MQ=255)
                                                                                                                                                                        tttttttGGGGTGTGTTGTTTGTGCC‑TTGGGGTTCGGTGTTAATTAAAAGGTGTTTTTGTGCCGGGGAAT‑TTGGTT‑GTTCGTAGGCCTTTCCCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGttctt                                                 <  2:1134585/233‑1 (MQ=255)
                                                                                                                                                                          tATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGG‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGttcttc                                                >  1:974720/1‑238 (MQ=255)
                                                                                                                                                                            cggggggCG‑GTGGTTTGTGCCGTTGTGGTT‑GGGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGt                                            <  1:736086/236‑1 (MQ=255)
                                                                                                                                                                                 ggCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGc                                                                                                                                                                                                                            <  2:640824/66‑1 (MQ=255)
                                                                                                                                                                                 ggCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGc                                                                                                                                                                                                                            >  1:640824/1‑66 (MQ=255)
                                                                                                                                                                                 ggCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCCCAGGCCCGCTGCTG‑ATGT‑ATTTCGCTGGGCAACAGACAC‑CTTTTTCCCGGGTTTTCCCGTTAc                                         >  1:1255239/1‑238 (MQ=255)
                                                                                                                                                                                     cgTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGCCCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGGATTTGTGTTGCCAGGGGGGC‑GCGT‑CGGTCATTTGGCTGCCGACCAAACCA‑CTTTTGCGGGGGTTTTCCCGTGAttgctg                                    >  2:919362/1‑239 (MQ=255)
                                                                                                                                                                                     cgTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑GTGG‑ATTTCCCTTCCCAACAGACCC‑ATTTTGCCGGGGTCTTCCCGTTActgctg                                    >  1:1076243/1‑239 (MQ=255)
                                                                                                                                                                                      gTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAACAGGGCTGGCGGTAGTTATTTTAGCCGGCGCCCTGCTG‑AGAT‑ATTTTTCTGCCGCACCGACCACCTTTTCCCGGGTTTTcccctaatctgtg                                     >  2:1280191/1‑229 (MQ=255)
                                                                                                                                                                                        ataaggacgagttgtggtt‑gggtTTAGGTAAAAGGGGTTTTAGGGCGGGAGAAA‑TTGGGT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGcc                                 <  1:852059/228‑1 (MQ=255)
                                                                                                                                                                                          tttttgcctgtttggtt‑ggggtgAAGTAAAACGGGTTTTAGGGCCGGAAAAA‑TGGGCT‑GGTTGTTGGCCTGCACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CC‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTa                               <  2:956641/227‑1 (MQ=255)
                                                                                                                                                                                          tttGGGCCATTGTGGTT‑GTGGTTAAGTAAAAGGGGTTTTAGGGCCGGAGAAA‑TTGGCT‑GGGCGTATGCCTTTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCt                                <  1:867050/238‑1 (MQ=255)
                                                                                                                                                                                             tgtgcctttgttttgtttgttAAGTAAAGGGGTTTTTAGTGCGGGAGAAA‑TTGGCT‑GGTCGTGTGTCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTACt                             <  2:70400/221‑1 (MQ=255)
                                                                                                                                                                                               cacATTGTGGTT‑GGGGTTAAGTAAAAGGGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTACTCg                           <  1:909295/236‑1 (MQ=255)
                                                                                                                                                                                                cctttttggtt‑ttggttAGGAAAATGGGTTTTTTGGGCCGG‑GAAA‑TTGGGTGGGTGGTTTGCCTGTACCGCCATGGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCGTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTACTCGCt                         <  2:1212939/233‑1 (MQ=255)
                                                                                                                                                                                                 cttttttgtttttgtttagttAAAGGCGGTTTTGGTGCGGGAGAAA‑GTGGGT‑GGTCGTATGCTTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTACTCGCt                         <  2:447638/219‑1 (MQ=255)
                                                                                                                                                                                                 ctttgtggtt‑gtggTTAAGTAAAAGGGGTTTTAGGGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTACTCGCt                         <  1:190530/236‑1 (MQ=255)
                                                                                                                                                                                                 cgtttgtgttttggtttAAGAAAAAGGGTTTTTAGTGCCGGAGAAA‑TTGGTT‑GGCCGTTGGCTTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTACTCGCt                         <  2:1247483/224‑1 (MQ=255)
                                                                                                                                                                                                 ccttgtgtgtttgggttAAGTAAAGGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTAGGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTACTCGCt                         <  1:1059999/226‑1 (MQ=255)
                                                                                                                                                                                                 catgttggtt‑gtggttAAGTAAAAGGGGTTTTAGTGCCGGAGAAA‑TTGGTT‑GGTCGTATGCCTGTTCCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTACTCGCt                         <  1:398234/233‑1 (MQ=255)
                                                                                                                                                                                                 cATTGTGGTT‑GGGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTCCCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTACTCGCt                         <  1:28153/238‑1 (MQ=255)
                                                                                                                                                                                                  aTTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCCGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTCCTGCTGGCCTATTCGCTa                        >  1:680612/1‑238 (MQ=255)
                                                                                                                                                                                                    tgtggtt‑gtggtTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTTCCTTCGCACAAGACCC‑CTTTTGCCGGGTTTTTCCCCTTCTTGCTGGCCTACCCGCGaaac                     >  2:318746/1‑237 (MQ=255)
                                                                                                                                                                                                    tggggtt‑gtggttAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTACTCGCTAAcc                     <  1:949393/236‑1 (MQ=255)
                                                                                                                                                                                                      ttgtttttgttttgttaatggtggTTTTGGGACCGGAGAAATTTGGAT‑GGT‑GGATGACTATACCGTCATTGCGGCGATCCTGTAGCCAATTCTGGATGGCGCCAT‑CA‑CTGGGCGTTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGTAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGCCCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTACTCGCTAACCt                    <  2:405800/217‑1 (MQ=255)
                                                                                                                                                                                                            gtggttAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTTGCAGGCGCGCTGCTG‑ATGG‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGGTCTTCCCGTTACTGCTGGCCTACTCGCTAACCTATATg               >  1:1125096/1‑238 (MQ=255)
                                                                                                                                                                                                               gttAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTGCCTTGGCAACAGACCC‑CTTTTTCCGGGTTCTTCCCGTTACTGCTGGCCCACTCGCTAAccatttttccg            >  1:711764/1‑229 (MQ=255)
                                                                                                                                                                                                                  aaGTAAAGGCGGTTTTAGGGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTACTCGCTAACCTATATGCCGACCa        <  1:1081765/239‑1 (MQ=255)
                                                                                                                                                                                                                      aaagGCGGTTTTAGGGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTACTCGCTAACCTATATGCCGACCATTg     <  1:318746/238‑1 (MQ=255)
                                                                                                                                                                                                                         aGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCCCAGGCGCGCTGCTG‑CTGG‑ATTTTCCTGGCCAACAAGCCA‑CCTTTGCCGGGTTCTTCCCGTTTCAGCTGTGCTACTCCCCAACCCATATTCCCACCAtttccc  >  2:1149071/1‑234 (MQ=255)
                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                          
CGATTCATCAGAAAAAATGTTAGCGCGGTCAAGTTTTCACCGCAAAGGTATTTAAAAGGTATTATTAAGTGGTATTGTCATCGCGTACCTTACATTACCTGTCATGAAGGAATTAAAAGATGAAAACAACAGCAAA‑GCT‑GTCGTTC‑ATGATGTTTGTTG‑AATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTT‑GTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAA‑TTGGCT‑GGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCAT‑CA‑CTGACCGCTTTTTCTCGGCG‑CAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTG‑ATGT‑ATTTCGCTGCGCAACAGACCA‑CTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTACTCGCTAACCTATATGCCGACCATTGCGC  >  NC_000913/2178700‑2179149

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑