| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,831,287 | T→C | 15.2% | E334G (GAG→GGG) | norR ← | anaerobic nitric oxide reductase DNA‑binding transcriptional activator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,831,287 | 0 | T | C | 15.2% | 182.4 / 2.2 | 81 | E334G (GAG→GGG) | norR | anaerobic nitric oxide reductase DNA‑binding transcriptional activator |
| Reads supporting (aligned to +/- strand): ref base T (37/28); new base C (9/6); total (47/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGAATAGCATGTTCCAGTTCGCGCACGTTTCCCGGAAAACTGTAGTGTTGCAGTAAATTTCGCGCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATCCAGAA‑ACAGCGTGCCGTTATCCGCCATTTCAAACTTCCCGCTGCGATTACTGATAGCGCCAGTAAACGCTCCTTTCACATGCCCG > NC_000913/2831053‑2831517 | tGAATAGCATGTTCCAGTTCGCGCACGTTTCCCGGAAAACTGTAGTGTTGCAGTAAATTTCGCGCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCACCCCGCTCACGCAGCGGCGGCACCGAAAGCGGAAACACGCTCAGCGGATGAAACAAATCGGCGCGGAATCGCCCTGCAAGCACCTCTTc > 1:973441/1‑239 (MQ=255) gCATGTTCCAGTTCGCGCACGTTTCCCGGAAAACTGTAGTGTTGCAGTAAATTTCGCGCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACccct > 1:444541/1‑231 (MQ=255) tGTTCCAGTTCGCGCACGTTTCCCGGAAAACTGTAGTGTTGCAGTAAATTTCGCGCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACCCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGCTGAAACAAACCGGCGCGGAATCGCCCGGCCCACAACCCTCCGCGCaaac > 2:184612/1‑237 (MQ=255) tcccgtgtcggccACTTTCCCGGGAAAACGGTAGTTTGCCAATAAATTGCGCGCCCCGGCCTTTAAACCCACGGGGGAGC‑CCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAAt < 1:184612/224‑1 (MQ=255) tCCAGTTCGCGCACGTTTCCCGGAAAACTGTAGTGTTGCAGTAAATTTCGCGCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCACCACCCCTTCGCGAAAATccc‑g > 1:892946/1‑239 (MQ=255) cAGTTCGCGCACGTTTCCCGGAAAACTGTAGTGTTGCAGTAAATTTCGCGCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCCATTGCCGTAAATCGC‑GGt > 1:283387/1‑239 (MQ=255) gTTCGCGCACGTTTCCCGGAAAACTGTAGTGTTGCAGTAAATTTCGCGCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCCC‑GGTTa > 1:958115/1‑239 (MQ=255) ttCGCGCACGTTTCCCGGAAAACTGTAGTGTTGCAGTAAATTTCGCGCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAACCAAAACGGCGCGGAATCCCCCTGCCCACACCCCCTCCCGTAAAACGC‑CGTTa > 2:1149849/1‑238 (MQ=255) cgcACGTTTCCCGGAAAACTGTAGTGTTGCAGTAAATTTCGCGCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGCACCAAATCGGCCCGGAATCCCCCTCCCCGCACCCCTTCCCGGAAAACGC‑GGGTAGgcgc > 2:772866/1‑239 (MQ=255) cgcACGTTTCCCGGAAAACTGTAGTGTTGCAGTAAATTTCGCGCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCCCGTAAATCGC‑GGTTAGTcg > 1:806272/1‑238 (MQ=255) ttGCAGTAAATTTCGCGCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCCCGTAAATCCC‑GGTTAGTCGCCGCCAGCACGCCGCCATCGACCCCCa > 1:1272619/1‑239 (MQ=255) gCAGTAAATTTCGCGCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCCCCGAAAGTGGAAACACGCTCAGGCGCTGAAACAAATCGGCCCGGAATCGCCCTGCCAGCCCCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCCGCACGCGCCCACCGACCCCCaaa > 2:849889/1‑239 (MQ=255) gCAGTAAATTTCGCGCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCCCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGcaca > 1:758524/1‑227 (MQ=255) cAGTAAATTTCGCGCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCCCCGAAAGTGGAAACACGCCCAGGCGCTGAAACAAATCGCCCCGGAATCGCCCTGCCAGCACCCCTTCCCGTAAATCCC‑GGTTATGCCCCGCCCCCACGCGCACACCACCCCGCaaaa > 2:1146973/1‑238 (MQ=255) cAGTAAATTTCGCGCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCGCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCACCCCGCCCCCAACGACCCGCaaaa > 2:1356771/1‑238 (MQ=255) cAGTAAATTTCGCGCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACAACCTCAGGCGATGCAACAAATCGGCCCGGCATCCCCCTGCCAGCACCTCTCCGGGTAAAACAC‑GGTTAGTCACCGCCCACACCCGCCCAACGCCCCGCAaac > 2:1256155/1‑239 (MQ=255) cgcgCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCAt > 1:425921/1‑238 (MQ=255) ccccGGCACTTACACCCGCGGGGGAGC‑GCCCGCGCCGAAACCAACACTCCACCCAGAACAACGCCGACAGAAGAATGACATCATCGCCCCGCTCACGCACGGGCGGCACCGAAAGTGGAAACCCGCTCAGGCGATGAAACAAATCGGCGGGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGTAAACAACGGTCATCGCCa < 2:973441/237‑1 (MQ=255) tCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCCCATCTACCCGCAAACAACGGTCATCGCCa > 1:838099/1‑238 (MQ=255) tctttAATCCCAGGC‑GGAGACGCCCCTGCCGCAACCGACCCGCCTCCAAGAAATCCCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAAcgcg < 1:509890/235‑1 (MQ=255) cctttaaaccccggcgGGAGG‑GCCCCTGCCCAAAACGACACTCCCCCGAAAAATCCCCCGCCAGCAGAATGACATCATCCCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAAcgcg < 1:370815/225‑1 (MQ=255) aaaTCCCACGCGGGAGA‑CCCCCGCCCGCAACCCACCCTGCCCGAAGAAATCCCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGaa < 1:710796/238‑1 (MQ=255) aaTACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCCCATCGACCCGCAAACAACGGCCATCGc > 1:972529/1‑226 (MQ=255) cccccgcggggAGC‑CCCCCGCCCGCAAACCCCCCTGCCCGCAAAAATACCCCGCCAGCAGAATGACCTCACCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAatat < 2:958115/231‑1 (MQ=255) cgcgGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCCCATCGACCCGCAAACACCGGTCATCGCCAAAGCGCTGACTATAGCCa > 1:1132689/1‑239 (MQ=255) cgcgGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCCCTTCGCGTAAATCGC‑GGTTAGCCGCCGCCAGCCCCCGCCAAACGACCCCAACACAACCGCCAACCCCAAccccgcgagaaccccaa > 2:1148597/1‑223 (MQ=255) cgcgGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACATCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCCACGCGCTGAATATTGCCa > 1:1081872/1‑239 (MQ=255) cgcgGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGAGGAAACACGCCCAGGCGATTAAACCAATCCGCGCGGCATCCCCCTGCCAGCCCCCCCTCGCCGCAATCCC‑GGTTAGTCCCCGCCCGCACGCGCCCATCGCCCCCCAAACAACGGTCAACCCCAACACGCCGacaaacccc > 2:353178/1‑230 (MQ=255) gcgGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACCCGCACATCGACCCGCAAACAACGGTAATCGCCAACGCGCCGAATAACGCCaa > 1:247412/1‑238 (MQ=255) aaagcacccgCCCCCGCCCAAAACGCCCCTGCCCGCAGAAATCCCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCa < 1:122633/230‑1 (MQ=255) gaga‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTcgc > 1:385554/1‑154 (MQ=255) gccccgggCCGCACACGACACCGCTCGCAAAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCa < 1:1256155/231‑1 (MQ=255) cgCCCCTGCCGCAAACGACCCGGCCCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCa < 1:1148597/237‑1 (MQ=255) aacgccccggccgcaaaaaaTCCCCCGCCAGCAGAATGACAACATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACAcc < 1:930870/213‑1 (MQ=255) aaCGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCACCACCCTcagca > 1:157310/1‑237 (MQ=255) cccccccccccccaaaaccccccccCAGCAAAAGGCCATCACCGCCCCGCCACCGCGGGGGGGGCACCGAAAGTGGAAACCCGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTg < 2:1355201/220‑1 (MQ=255) cacTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGAGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTCCAACACCCTCCGCAGCCTgg > 1:1095938/1‑238 (MQ=255) cccacaaaaaccccccccCAGCAGAATGCCTTCATCCCCCCGCCCAGCAAGGGGCGGCCCCCAAAGGGGAACCCCGCCCATGCGATGAAACAACCCGGCGTGGAACCCCCCTGCCAGCACCCCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCa < 2:283387/227‑1 (MQ=255) cTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACCTCGACCCGCAAACAACGGTCATCGCCAACGCGCCGAAAATCGCCATCCTGAAAAACCCTCAGCAGCTGGGCCTCCa > 1:659022/1‑239 (MQ=255) cTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCCCTGAATATCGCCATACTCCAACACCCTCAGCAGCTTGGCCTGCa > 1:994037/1‑239 (MQ=255) cTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAAAACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCGGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAATCGCCGCCAGCACGCGCCCATGGACCCGCAAACAACGGCAATCGCCAACGCGCGTAAACTCGCCAAACACCAACACCCTCAGAAGCttctgtctct > 2:930870/1‑231 (MQ=255) tCGCAAAAATCCCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCa < 1:849889/238‑1 (MQ=255) aaagatcccccccCAGCAAAATACCACCACCCCCCCGCGCACGCCGGGGCGGCCCAGAAAGTGGAACCACGCGACGGCGATGAAAAAAATCGGCGCGGAACCGCCCTGCCAGCACCTCTTCGCGTAAAGCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGcc < 2:425921/232‑1 (MQ=255) tACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCCCAGCAACTTGGCCTGCAATGCCAACGa > 1:920374/1‑239 (MQ=255) ccccccGCCAGCAGAATACCACCCTCGCCCCGCTCACGCAGCGGGGGCCCCGAAACTGGAAACACGCTCAGGCGATGAAAAAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAACCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGa < 2:243382/237‑1 (MQ=255) ccccGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACACCGCCCCGCAAACAACGGTCATGCCCACCGCGCCAAATAACGCCACACTGCAACCCCCCCAGCAACTTGGCCAGCAAAGCCAacaaca > 2:861209/1‑239 (MQ=255) cGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCCCATCGACCCGCAAACAACGGGCATCGCCCACCCCCTGAAAATCGCCCTACTCCAAAACCCCCAGCACCTTGGCCTGCacacccaccgaaaac > 2:1214217/1‑224 (MQ=255) ccAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGCCCCGCAAACAACGGTCATCGCCAACGCGCTCAAACTCCCCATACCGCCACACCCCCAACACCCTCGCACCCAATGCCAACgtacaccc > 2:412806/1‑231 (MQ=255) ccAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAAAACCCTCAGAAGCTTGGCCTGCAATGCCAACGACaaaca > 1:457115/1‑235 (MQ=255) agAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGa > 1:1127145/1‑145 (MQ=255) aaaacacctccctcGCCCCGCCCACGCGGCGGCGCACCCGAAAGGGGAAACCCGCCCAGGCGATAAAACAAATCGGCGCGAAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGCCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGAt < 2:1272619/227‑1 (MQ=255) aacgcccactcccccccccccACCCCGCGCCCGCCCCCAAAGTGGAAACCCCCTCGCTCGAGTAAACCATTCGGGGGCGAACCCCCCTGCCGACACCCCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGAtct < 2:1136033/226‑1 (MQ=255) aaTGACATCATCGCCCCGCTCACGCAGCGGCGGCCCCGAAAGTGGAAACCCGCTCAGGCGAGGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCCCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGAtct < 1:81385/239‑1 (MQ=255) tggaatcacgcccccGCTTCCGCAGCGGCGGCACCGAAAGTGGAAACAGGCTAAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGACTGCAATGCCAACGACAACTCGCCGATCTCa < 1:353178/228‑1 (MQ=255) tcatcGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGCCAACTCGCCGATCCCATCCAg > 1:1162570/1‑239 (MQ=255) tcGCCCCGCTCCCGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAACTCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCTC‑GGTTAGTCGCCGCCAGCACGCGCACATCCCCCCGCCAACAACGTCCATCCCCCCCGCGCTCAATATCGCCATACTTCGACCCCCTCACCATCTTGACCTCCACTCCCACCGCCaccccccccgatccccccctaa > 2:1273948/1‑217 (MQ=255) tcGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCCACGCGCTGAATATCGCCATACTGCAACCCCCTCAGCACCTGTGCCTGCAACGCCCACGACAACCCGCCGACCCCATCCAGaa‑a > 2:448655/1‑239 (MQ=255) gCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCACCAGCTTGGCCTGCAATGCCAACGAAAACTCGCCGATCTCATCCCGAA‑Ac > 1:1021785/1‑238 (MQ=255) cccccccacccggggcgtcCCCGAAAGTGGAAACCCGCTCGGGCGATAAACAAAATCGGCGCGGAATCCCCCGCCCAGCACCCCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATCCAGAA‑ACAGCg < 2:1021785/226‑1 (MQ=255) cGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGACTATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCCTCCAGAA‑ACAGCg > 1:1353718/1‑238 (MQ=255) gccACGCGGCGGCGGCACCCAAAGGGGAAACACGCCCAGGCAATTAACCAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATCCAGAA‑ACAGCGTGc < 1:499627/237‑1 (MQ=255) gcggcACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGaa < 2:174415/147‑1 (MQ=255) gcggcACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGaa > 1:174415/1‑147 (MQ=255) gAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACCCCCTCAGCAGCTTGGCCTGCAATGCCCACCACAACTCGCCGATCTCATCCCGAA‑ACAGCGTCCCGTTATCCGCCATTTaaaa > 1:567797/1‑239 (MQ=255) tGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGAACCCATCCAGAACACA‑CGGCCCGTTAAACGCCATTTCAAACTTc > 2:490032/1‑238 (MQ=255) gaaaccgctccAGGGGATGAAACAAATCGGTCCGGAATCGCCCTGCCAGCCCCTGTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACCCCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATCCAGAA‑ACAGCGTGCCGTTATCCGCCATTTCAAACTTccc < 1:913647/228‑1 (MQ=255) aaaccccccTCGGGCGAAGAAAAAAACCGGGCGGGAATCCCCCGGCCAGCCCCTTTTCCCGTAAACCGC‑GGTTAGGCGCCCCCAGCCCGGCCCCATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATACCGCCATACTGCAACCCCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATCCAGAA‑ACAGCGTGCCGTTATCCGCCATTTCAAACTTccc < 2:659022/230‑1 (MQ=255) caccgctccAGGCGAAGAAAACAACGGGCCGGGAACCCCCCTGCCAGCCCCTCTTCGCG‑AAAACGCGGGTTAGGCGCCGCCAGCACGCGCACATCGCCCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATCCAGAA‑ACAGCGTGCCGTTATCCGCCATTTCAAACTTCCCGc < 2:157310/230‑1 (MQ=255) ccccgggggATAAAACAAGCCGGCGCGGAACGCCCCTGCCAGCCCCTCTTCCCGTAAATCGC‑GGTTCGGCGCCGCCAGCCCCCCCCAACCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACCCCCTCAGCAGTTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATCCAGAA‑ACAGCGTGCCGTTATCCGCCATTTCAAACTTCCCGCTGCGAt < 2:1353718/231‑1 (MQ=255) aGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCCCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATCCAGAA‑ACACCGTCCCGTTATCCGCCATTTCAAACTTCCCCCTGCGATTAcc > 2:39284/1‑238 (MQ=255) gggcataaaaaaagacGGCGCGACATCGCCCTGCCAGCACCCCCTCGGGTAAACCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGC‑ATGCCAACGACAACTCGCCGATCTCATCCAGAA‑ACAGCGTGCCGTTATCCGCCATTTCAAACTTCCCGCTGCGATTACTGa < 2:247412/224‑1 (MQ=255) gCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATCCACAA‑AACGCGTGCCGTTATCCGCCATTTCAAACTTCCCGCTGCGATTACTGa > 1:753449/1‑239 (MQ=255) gATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGCCATCGCCAACGCGCTGGACATCGCCATACTGCACAACCCACAGCCGCTTGGCCTGCAATACCAACCCCACCTACCCGATCCACTCCCGAA‑ACAGCCCGCCCTTATCCCCCCTTTCAAACTTCCCCCTCCgctaaccagaa > 2:710246/1‑229 (MQ=255) tGAAACAAACCGGGGCGAAACCCCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATCCAGAA‑ACAGCGTGCCGTTATCCGCCATTTCAAACTTCCCGCTGCGATTACTGATAg < 1:1149849/238‑1 (MQ=255) accGGCGCGGAATCCCCCTGCCAGCCCCTTTTCGGGTAAACCCC‑GGTTAGTCGCCGCCAGCCCGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATCCAGAA‑ACAGCGTGCCGTTATCCGCCATTTCAAACTTCCCGCTGCGATTACTGATAGCGCCAGTaa < 1:1214217/237‑1 (MQ=255) cGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATc < 2:804474/172‑1 (MQ=255) cGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATc > 1:804474/1‑172 (MQ=255) ggCGGGGAACCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATCCAGAA‑ACAGCGTGCCGTTATCCGCCATTTCAAACTTCCCGCTGCGATTACTGATAGCGCCAGTAAACg < 1:872265/239‑1 (MQ=255) ggCGCGGAACGCCCCTGCCAGCCCCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATCCAGAA‑ACAGCGTGCCGTTATCCGCCATTTCAAACTTCCCGCTGCGATTACTGATAGCGCCAGTAAACg < 1:145630/239‑1 (MQ=255) cccccccccccgccccTCTTCGGGAAAAACCG‑GGTTAGCCCCCGCCAGCACGCCCACCTCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATCCAGAA‑ACAGCGTGCCGTTATCCGCCATTTCAAACTTCCCGCTGCGATTACTGATAGCGCCAGTAAACGCTCCTTTca < 2:1162570/225‑1 (MQ=255) cTGCCAGCACCCTTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATCCAGAA‑ACAGCGTGCCGTTATCCGCCATTTCAAACTTCCCGCTGCGATTACTGATAGCGCCAGTAAACGCTCCTTTCACATGc < 1:490032/239‑1 (MQ=255) ccAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATCCAGAA‑ACAGCGTGCCGTTATCCGCCATTTCAAACTTCCCGCTGCGATTACTGATAGCGCCAGTAAACGCTCCTTTCACATGCCCg > 1:923462/1‑239 (MQ=255) | TGAATAGCATGTTCCAGTTCGCGCACGTTTCCCGGAAAACTGTAGTGTTGCAGTAAATTTCGCGCTCCGGCACTTAATACCACGCGGGAGA‑GCCCCTGCCGCAAACGACACTGCTCGCAGAAATACCCCGCCAGCAGAATGACATCATCGCCCCGCTCACGCAGCGGCGGCACCGAAAGTGGAAACACGCTCAGGCGATGAAACAAATCGGCGCGGAATCGCCCTGCCAGCACCTCTTCGCGTAAATCGC‑GGTTAGTCGCCGCCAGCACGCGCACATCGACCCGCAAACAACGGTCATCGCCAACGCGCTGAATATCGCCATACTGCAACACCCTCAGCAGCTTGGCCTGCAATGCCAACGACAACTCGCCGATCTCATCCAGAA‑ACAGCGTGCCGTTATCCGCCATTTCAAACTTCCCGCTGCGATTACTGATAGCGCCAGTAAACGCTCCTTTCACATGCCCG > NC_000913/2831053‑2831517 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |