| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,638,227 | A→G | 18.2% | E196G (GAG→GGG) | pitA → | phosphate transporter, low‑affinity, tellurite importer |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,638,227 | 0 | A | G | 18.2% | 174.3 / 2.1 | 94 | E196G (GAG→GGG) | pitA | phosphate transporter, low‑affinity, tellurite importer |
| Reads supporting (aligned to +/- strand): ref base A (32/39); new base G (12/9); total (46/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATCCAGCTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCCACTGGCTA‑CGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTT > NC_000913/3637994‑3638461 | ttCCAGCTCTTCTTCGTTGATTGGCGCGATCTTCGGGGTTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTTTTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTg < 2:24779/238‑1 (MQ=255)agtcAGCTCTTATACGCTGATTGGTGGGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCTGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGt < 1:537599/235‑1 (MQ=255)aTCCAGCTCTCATTCGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGGCCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTAGCCACCTGACCCCAGCGGA‑GCGTg < 1:307671/239‑1 (MQ=255)aTCCAGCTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGGTTCCACCTGACCCCCACCGA‑GCgcg > 1:42214/1‑237 (MQ=255)aTCCAGCTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCCG‑CTTTTTTTGCTGCGTCGCTACTGGAGCGGGA‑CCAAGAAACGCGCCCGGTTCCACCTGCACCCAACGGG‑GCggg > 1:1037341/1‑237 (MQ=255) gCTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAATTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGGCTT‑ATTTTATTGCTTCGTCGCTTCTGGAGTGGCA‑CCAAGAAACGGCCCCGGATCCCCCTGCCCCCCGCGGAGGCGGGaaaa > 2:283105/1‑239 (MQ=255) ctcATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAaaagaaa < 1:232429/239‑1 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAGTATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGCCTG‑ATTTTTTTGCTGCGTTGCTCCTGGGGCGGCA‑CCACGAAACACGCCCGTGAGCCCCCGACCCCACCGGA‑CGGGGAAAAAAAAAACCGCAaa‑aa > 2:523403/1‑239 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTGTT‑ATTTTCTTTCTGCTTCGCTCCTTGGCGGGGA‑CCAAAAAACACGCCCGGAGCACCCTGTCCCCCGCCGC‑GCGGGGaaaaaaaaaaggaaaaaa > 2:1057747/1‑228 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑CTTTTCTTGCTGCGGCGCTACTGGAGCGGCA‑ACCAGAAAATCGCCCCTATCCACCTGCCCCCCACGGA‑CAGTGAAAAACAAACCGGCAaa‑aa > 1:570351/1‑239 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTTCTGCGTCGCTCCTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCCCCTGACCCCAGCGGG‑GCCTGAAAAGAAAGACggacaaaa > 1:1126601/1‑233 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCC‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAGGGACGGCAaa‑aa > 1:1269025/1‑239 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑AATTTCTTGCTGCGTCGCTACTGGAGCGGCC‑CCCAGAAACCCGCCCGTATCCACCCGACCCCCGCGGG‑GCGTGAAAAGAAAGACGGCAAgga > 1:301873/1‑237 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGGCTG‑ATTTTTTTGCTCGCTCGCTCCTGGGGCGGCC‑CCAAAAAACCCGCCCCGATCCCCCCGCCCCCACCGGG‑GCGTGAAAAGAAAAAcaggaaaaa > 2:763631/1‑231 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGGGTTTGCTGGCGGTCTG‑ATTTTTTTCCTTCGTCCCCACTGGGCGGGCACCCAAGAAACCCACCCATACCCCCCCACCCCCACCGGA‑GGGGGaaaaaaaaaaagaaaaaa > 2:670692/1‑229 (MQ=255) ggCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCC‑ACAAGAAACGCGCGCCTATCCACCTGACCCCCGGGGA‑GCGCGCAAAGAAAGACGGGCAG‑aaaaa > 1:1190896/1‑239 (MQ=255) gATCATGGGTATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTGCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCCCCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAgccg < 1:1369094/238‑1 (MQ=255) tcatcGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTT‑ATTTTCTTGCTTCTTCGCTACTGGTGCGGGC‑CCCAGAAACGCGCCCGTATCCCCCTCACCCCCCCGGG‑GGGTGGAAAGAAAAACGGCaaa‑aaaaaagcccgg > 2:1177018/1‑232 (MQ=255) tttGTTTTCACCAATGTGTTGGTGCCGGGGGTGTCAGGGGTGTGTGCCCTAAATATCCCGAAAGTTTTAAGTTTTTTCGGTTCTCTGATCGTTTCCCCTATTGGCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTCCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTACCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAGGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGAc < 2:1269025/238‑1 (MQ=255) tttttttaccaagtggttttatgaCCGGGGCGTCAGTGTTGGATGCCCTCAATACCCGGAAAGTATTAAGTTTTTCCGGTTCCCTGATCGTTCCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCCCCTGCCCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGAc < 2:118937/218‑1 (MQ=255) tttgTTTAACCAATTGGTTGATGACGGGGGCTTCAGGGGTGAATGCACTAAATACCCCGAAAGTTGTAAGTATTTGCGGGTCTCTGATCGTTTCCCCGATTGCCGGCCGGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCGGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTAGCCACCTGACCCCGGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGAc < 2:1037341/235‑1 (MQ=255) gTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGGATCCACCTGACCCCAGCGGA‑GCGGGAAAAGAAAAACGGCAAA‑AAAAAACCGC‑CGGTCTGGAcgc‑gg > 1:1273110/1‑238 (MQ=255) ttACCCAAGGGGTTGATGACCGGGTCGTCAGTGGTGGATGCAATCAATCTCCGGAAAGTATTAATTTTTTTCGGTTCTCTGATCTTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTa < 1:1233687/238‑1 (MQ=255) ttAACCATGGCGTTGATGACCGGGACGTAAGTGGTGGATGCACTCAATACCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTAGTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTGCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTAt < 1:51342/239‑1 (MQ=255) aCCAATGCGTTGATGACCGGAACGTCAGTGCCGAATGCACTCAATATCCCGCAAGGATTAAGTATTTTCGGTTGTCGGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGTTGGCGGCCTG‑ATTTTCTTACTGCGTCCTCACCGGAGCGGAG‑CCAAGAAACGCGCCCGTATCCCCCCGACCCCCAGGGG‑GCGCGGAAAGAAAACAGGAAAA‑GAAAAACCGC‑AGCACTGGAcggaggttga > 2:147144/1‑231 (MQ=255) tGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCC‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCCC‑CGTTCTGGACGC‑GGATTGCGCTGa > 1:499295/1‑239 (MQ=255) gTTGATGACCGGGACGTCAGTGGTGGATGCACTAAATACCCCGAAAGTTTTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCCCCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATc < 1:776952/238‑1 (MQ=255) ccGGGACGTCAGTGGTGGATGCCCTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGAc < 1:995172/214‑1 (MQ=255) cGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGG‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAACCGC‑CGTTCTGGCACC‑GTATTGCGCCGATCCTTTCCGCt > 1:1088849/1‑238 (MQ=255) tGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTTTTGCCTCGTCGCTACTTGAGCGGCA‑CCCAGAAACTGGCCCGTATCCCCCCTGCCCCCGCGGG‑GCGGGAAAAGAAAAACCGCCCGAAAAAACCCGC‑CG‑TCCGGAAGCGGTTTTGCCCGGACCCTTTCCCCTACCgcggggccgtttgt > 2:927905/1‑225 (MQ=255) tGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCCCTACTGGAGCGGCC‑CCAAGAAACGCGCCCGTATCCACCTGTCCCCCGCGGG‑GCGTGAAAAGAAAGACGGCCAA‑AAAAAGCCCCGCGTT‑TGAGCGC‑GTATTGCGCTCAGCCTTTCCGCAAACA‑GC‑GGGGCGTTTTT‑Gc > 2:222292/1‑239 (MQ=255) cACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGCCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAgccg < 1:74629/182‑1 (MQ=255) cccGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTTCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCCCCCGTATCCACCGGCCCCCAGCGGC‑GCGGGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGCAGC‑GGATTGCGGTGATCCTTTCCCCCATGC‑GC‑GGGGCGTTTTT‑CCACgggcggaaag > 2:1347580/1‑231 (MQ=255) cGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GGATTGCGCTGATCCTTTCCGCCATCG‑GC‑GTGGCGGTTTC‑TCCCGGGGCG‑GACGac > 1:997495/1‑238 (MQ=255) gAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑CTTTTTTTGCTGCGTCGCTACTTGAGCGTCA‑CCAAGAAACGCGCCCGTTTCCCCCTGACCCCCCCCGG‑GCGGGAAAAGAAAGACGGCAAA‑AAAAACCCCC‑CGTTCTTGACGC‑GTATTTCCCCTGTCCTTTTCCCTATCG‑CG‑GGGGGGGTTTT‑GCACgggccgccccaga > 2:461670/1‑228 (MQ=255) gAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTTCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGGCCCCAGCGGG‑GCGGGGAAAGAAAAACGGCAAG‑AAAAAGCCGC‑CGGTCTGGACGC‑CGATTGCGCTGCACCTTTCCGCTAACG‑GC‑GGGGCGGTTTT‑CCAACGCGCG‑aaaaaag > 2:129643/1‑234 (MQ=255) gAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTACTCCCCTGACCCCAGCGGA‑GCGGGAAAAGAAAGACGGCACG‑AAAAAACCGC‑CCCTCTGGACGC‑GTATTACCCTCAACCTTTCCGCCAAAGCGG‑GTGGCGTTTTccaccgccggcaacagg > 2:328564/1‑223 (MQ=255) atgtttttagttttTTTGGCTCTTTGTTTGTTTCCCCTATTGTGGGCCGGGTTTTTGCCGGGGGTCTG‑ATTTTCTTGCTGCGTCGCTATGGGAGCGGCA‑ACAAGAAACGCGCCCGTACCCCCCTGCCCCCAGGGGA‑GGGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGt < 2:1175414/231‑1 (MQ=25) aattttttttttttttTGGTTTTCTTTTCTGTTCCCCTTTTCGCGGCCTGGTGTTGGTGGGGGGTTTA‑TTTTTCTTGCTGCGGCGCTACGGGGGCGGCA‑CAAAGAAACGCGCCCGTATCCACCGGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGAAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGt < 2:1018801/227‑1 (MQ=25) attaatttttTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGa < 1:981429/239‑1 (MQ=255) ttttttggtttttttgtgcttttCCCCTTTTGTGGGCGTGGTTTTTGGGGGGGTTTTT‑ATTTTCTTGCTGGGCCGCTACTGGGGGGGCA‑CCAAGAAACGCCCCCTTACCCACCTGACCCCAGGGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCa < 2:1371166/219‑1 (MQ=25) tattTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCa < 1:297884/213‑1 (MQ=255) tttCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTTCTGCGTCGCTACTGGGGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGGAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CCGTCTGGCCGC‑GTATTGCGCTGGTCCTTTCCCCCATCG‑GC‑GGGGGGCTTTT‑GCCCCGCGCG‑AACgcagggccgaaaagaactg > 2:796112/1‑221 (MQ=255) ttCGGTTCTCTGATCGTTCCCCCTGTGGGCGGCCTGGTGTTGGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTAACCCCCTGCCCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTgg < 1:927905/239‑1 (MQ=38) tgcGGTTCTCTGATCGTTTCCCTTATGGCCGGCCTGGTTTTGGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTTCTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTgg < 1:746391/237‑1 (MQ=255) cgtgtctcGGATCGGTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTc < 1:276658/235‑1 (MQ=255) ttCTCTGATCGTTTCCCCTGTGGGCGGCTTGGTTTTTGCTGGCGGTCTG‑ATTTTCTTGCGGCTTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTAGCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTg < 1:298945/238‑1 (MQ=38) tctcTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGGCTCGCTACTGGAGCGGCA‑CCAAGAACCGCGCCCGTATCCACCTGCCCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGt < 1:722733/239‑1 (MQ=255) tctGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGG‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTT‑GCACGGCGCG‑GACGATGGTCAGAAAAGGATTTGGTTGGTTa > 1:1120320/1‑239 (MQ=255) cttaTCGTTTCCCCTTTTGGCGGCCTGGTTTTTGCTGGGGGTCTG‑ATTTTCTTGCTGCGGCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑t < 1:857329/236‑1 (MQ=255) tttcccccTTTTTGCGGCTGGGGGTTTGC‑GGCGGTTTGTTTTTTCTGGCGGCGTCGCTACTGGGGCGGCA‑CCAAGAAACGCGCCGCTATCCCCCGGCCCCCGGGGGA‑GCGTAAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGt < 2:266699/235‑1 (MQ=255) tttCCCCTTTTCTCGGCCTGGTTGTTGTTGCCGGTCTG‑TTTTTATTCCGGCGCCGTTACGGGAGCGGCA‑CCAAGAAACGCGCCCGTACCCACCTGCCCCCAGCGGG‑CCTTAAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTa < 2:1104379/239‑1 (MQ=37) ttCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTa > 2:161995/1‑152 (MQ=255) ttCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTa < 1:161995/152‑1 (MQ=255) tCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTa > 2:19596/1‑151 (MQ=255) tCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTa < 1:19596/151‑1 (MQ=255) cTATTGTCGGCCTGGTGTTTGGTGGCGGGCTG‑ATTTTCTTGCTGCGTCGCTACGGGAGCGGCA‑CAAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTattgatt < 1:763631/239‑1 (MQ=255) ggTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACCGCGCG‑AACCATGGTCAGGAAGGACTTGGTCTGGTTATTGTTGG‑ATTGATTgggggtgcccccg > 1:290984/1‑228 (MQ=255) tttttGCTGGCGGTCTG‑ATTTCCTTGCGGCGTCGCTACGGGGGGGGCC‑CCAAGAAACGCGCCCGTACCCACCTGCCCCCAGCGGG‑GCGTGAAAAGAAAGCCGGCAAA‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCcag‑c < 1:523403/236‑1 (MQ=38) tgtTTGCTGGCGGTTTT‑ATTTTCTTGCTGCGTCGCTACTGGGGCGGCA‑CCAAGAAACGCCCCCGTATCCCCCTGACCCCAGGGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCcag‑c < 1:925688/238‑1 (MQ=255) tgtTTGCTGGCGGTTTG‑ATTTTCTTCGTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCCCCCGTACCCACCTGACCCCAGCGGG‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCcag‑c < 1:1177018/238‑1 (MQ=255) gCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTTGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCCGCGGA‑GCGTGAAAAGAAAGAAGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GGATTGCGCTGATCCTTTCCGCCATCG‑GCGGGGGCGTTTTC‑‑CCCGGCGCG‑ACAAGTGGGTAGAAAAGCATTGGGCTGGTTT‑TGTGGGGATTGTGTGGGGTCGCGcccaacggggttggg > 2:1201189/1‑226 (MQ=255) gTCTG‑ATTTTCTTGCTTCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCCGCGGA‑GCGTGAAAAGAAAGACCGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTTCCCCATCG‑GC‑GCGGCGTTTTC‑GCCCCGCCCGAAACACTTGACACAAAGG‑ATTTGTCCGGTTT‑TGTTTGGTTTGATATGCGTCCCCGCAG‑CAGCCGT‑Cgtgggg > 2:1149563/1‑237 (MQ=255) tCTT‑ATTTTCTTGCGCCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCCCCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑Cgtggtg < 1:935483/238‑1 (MQ=255) gcGTCGCTACGGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCCCCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCCACt < 1:1122641/238‑1 (MQ=255) cGCTACTGGAGCGGCC‑CCAAAAAACCCCCCCGTTTCCGCCTGACCCCGGCGGA‑GCGGGAAAAAAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCCACTGGCt < 1:328564/238‑1 (MQ=38) gattcTGGAGCTGCA‑CCAAGAAACGCGCCCGTATCCGCCTGACCCCAGCGGG‑GGCTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCGTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCCACTGGCTa < 1:361488/234‑1 (MQ=255) ggAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGGTTTCAGCCGGCCGCG‑‑ACGCTGGTCGAAAAGGCATTGGTCGGGTGA‑TTTTGGTATTGATTGGGGGCCCCCCGG‑CAGCCTTGCGTGGGGaataaaagacccactgagacgaaaa > 2:1122025/1‑215 (MQ=255) gCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAACCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGGGTCGCGCCCG‑CAGGCTT‑CCTGGTGAAAATAAATGACAAAGGCTA‑cagaaaaac > 2:529612/1‑230 (MQ=255) gCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑CACCATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGGCGGGCCAG‑CAGGCTT‑CCGGGGGAACATGAAGGCCAACGGCGA‑CGAAAAAacccca > 2:910777/1‑237 (MQ=255) gCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTTGTCTGGGTA‑TGTTGGTATTGATTGGCGTCGCCCCAG‑CAGGCTT‑CGTGGTGGACATGAATGCCAATGGCTA‑CGCAATCacccg > 1:936720/1‑238 (MQ=255) gCA‑CAAAGAAACGCGCCCGTATCCACCTGACCCCAGGGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCCACTGGCTA‑CGAAATCacccg < 1:222292/238‑1 (MQ=255) aaGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGCCGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTAGCGTTTTC‑GCCAGGCGCG‑AACGCTGGGCCGAAAGGCATTGGGCTGGTTT‑TCTTGGTCATGGTTGGCGTCGCGCCCC‑CAGGCCC‑TGCGGGGGACATGAATCCCCCTGGCGA‑CGCAATAacccctacccg > 2:1242414/1‑239 (MQ=255) aGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAAGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGGCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCCACTGGGTA‑CGAAAGCaaccgcacccgt > 1:533444/1‑239 (MQ=255) gAAACGCCCCCTTTTCCCCGCGACCCCGGGGGA‑GGGTAAAAAGAAAGACGGCAAA‑AAAAGGCCGC‑CGTTTTGGACGC‑GTATGGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCCACTGGCTA‑CGAAATCACCCGTACCCGTg < 2:533444/239‑1 (MQ=37) agcgcgCCCGTCCCCACCTGACCCGAGCGGG‑CCGGTAAAACAAAGACGCAAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCCACTGGCTA‑CGAAATCACCCGTACCCGTg < 1:713921/235‑1 (MQ=37) accgccCCCGTACCCACCTGACCCCAGGGGA‑TCGTGAAAAGAAATACGGCAAG‑AAAAAGCCGT‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCCACTGGCTA‑CGAAATCACCCGTACCCGTg < 1:1228381/235‑1 (MQ=255) aaCGCGCCCCTACCCCCGGGCCCCCAGCGGG‑CCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCCACTGGCTA‑CGAAATCACCCGTACCCGTGAt < 1:1072044/239‑1 (MQ=255) aaCGCCCCCGTACCCACCGGACCCCAGCGGA‑GCGTGAAAAGAATGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCCACTGGCTA‑CGAAATCCCCCGTACCCGTGAt < 1:283105/239‑1 (MQ=255) cgcgCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCCCCGGGCG‑AACCATGGTCCAAAAGGCATTGGGCTGGGTA‑TTTTTGCATTGGTTGGGCTCGCGCCCGCCAGGCTT‑‑GTGGGGAACAATAATGCCACTGGCCA‑CCAAAACaccccatcccggggcg > 2:1142318/1‑226 (MQ=255) cgcgCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGGTT‑CGTGGTGAACATGAATGCCACTGGCTA‑CGAAATCACCCCGACCCCGGATGc > 1:431495/1‑239 (MQ=255) cgtttccgacgcaCCCGAGCGGG‑GGGTGAAAAGAAGCACGGCAAG‑AAACAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCCACTGGCTA‑CGAAATCACCCGTACCCGTGATGCCATcaa < 1:606743/227‑1 (MQ=255) tATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCCGAAAGGCATTTGGCTGGGTA‑TGTTGGGATTGATTGGCGTCGCGCCAG‑CAGGGTT‑CGTGGTGGAAATGAATTCCACTGGCTAGCCAAAACccccgaacccgtaggccccaaaaa > 2:1208962/1‑227 (MQ=37) cccccTGGCCCAGGCGGG‑GGGTGAAAAAAAAAGCGGAAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCGTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCCACTGGCTA‑CGAAATCACCCGTACCCGTGATGCCATCAACAACg < 1:461670/236‑1 (MQ=37) cTGACCCCGGCGGG‑GAGTAAAAAAAAAGACGGAAAG‑AAAAGGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCGG‑CAGGCTT‑CGTGGTGAACATGAATGCCACTGGCTA‑CGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGa < 1:386796/239‑1 (MQ=37) cTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCCACTGGTTA‑CGAAATAACCCGGAACCGTGTTGCCATACAAAACGCCGa > 1:1208387/1‑239 (MQ=38) aCCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GT‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCTTCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAAGGCCACTGGCTA‑CGAAATCACCCGTACCCCGGATGCCACCAAAAACGACGaaaa > 2:1363462/1‑237 (MQ=255) aCCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑CGTGGGGAACATGAATGCCACTGGCTA‑CGGAATCACCCGTACCCCTGATGCCCTCAACAACGTCGaa > 1:287205/1‑237 (MQ=255) cAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCGTTGGTCTGGTTA‑TGTTGGGATTGATTGGCGTCGGGCCAG‑CAGGCTT‑CGTGGGGAAAAGTGATGCCACTGGCGA‑CGAAAACACCCGGAGCCGTGGTGCCAACAAAAAAGGCGaaaggt > 2:386796/1‑233 (MQ=255) gggggA‑GGGTAAAAAAAAAGACGACAAA‑AAAACGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATCGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCCACTGGCTA‑CGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACt < 2:1088849/236‑1 (MQ=37) aGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCAt > 1:272144/1‑120 (MQ=255) aGCGGA‑GCGTAAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCAt < 2:272144/120‑1 (MQ=255) gCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCCGCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCAACTGGCTA‑CCAAAACACCCGAAACCGCGATGCCATCAAAAACGTCGAAGCTTACtt > 1:502728/1‑239 (MQ=38) ggA‑GCGTGAAAAGAAAGCGGGCAAG‑AAAAGCCCGC‑CGTTCCGGCCGC‑GTATTGCGCTGATCCTGTCCGCTAGCG‑GG‑GTGGCGTTTTG‑GCACGGCGCG‑AGCGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCCACTGGCTA‑CGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACt < 1:790711/236‑1 (MQ=255) | ATCCAGCTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTG‑ATTTTCTTGCTGCGTCGCTACTGGAGCGGCA‑CCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGA‑GCGTGAAAAGAAAGACGGCAAG‑AAAAAGCCGC‑CGTTCTGGACGC‑GTATTGCGCTGATCCTTTCCGCTATCG‑GC‑GTGGCGTTTTC‑GCACGGCGCG‑AACGATGGTCAGAAAGGCATTGGTCTGGTTA‑TGTTGGTATTGATTGGCGTCGCGCCAG‑CAGGCTT‑CGTGGTGAACATGAATGCCACTGGCTA‑CGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTT > NC_000913/3637994‑3638461 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |