Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,277,559 A→T 13.1% Y31F (TAT→TTT)  soxR → redox‑sensitive transcriptional activator of soxS, autorepressor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,277,5590AT13.1% 258.2 / 2.4 95Y31F (TAT→TTT) soxRredox‑sensitive transcriptional activator of soxS, autorepressor
Reads supporting (aligned to +/- strand):  ref base A (20/61);  new base T (12/2);  total (32/63)
Fisher's exact test for biased strand distribution p-value = 2.27e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

CTGGTCAATATGCTCGTCAATCCATGCGATAAGATCCTGAATAATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTC  >  NC_000913/4277323‑4277786
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                    
cTGGTCAATATGCTCGTCAATCCATGCGATAAGATCCTGAATAATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTTTg                                                                                                                                                                                                                                    >  1:915313/1‑239 (MQ=255)
 ttgTCAATAGTCTCGTCAATCCATGCGATAAGATCCTGAATAATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGa                                                                                                                                                                                                                                  <  1:1038881/237‑1 (MQ=255)
 tGGTCAATTTTCTCTTCAATCCATGCGATAAGATCCTGAATAATTTTCGGAGGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATg                                                                                                                                                                                                                                    <  2:1076470/238‑1 (MQ=255)
  ggTCAATATGCTCGTCAATCCATGCGATAAGATCCTGAATAATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACCCAGCGGTGGGGCGGCATGGGCGCTGCATTTCCTTGaa                                                                                                                                                                                                                                 >  2:1038881/1‑239 (MQ=255)
        tatGCTCGTCAATCCATGCGATAAGATCCTGAATAATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTGTCGGGCCTGGCCTTTTTTGAAAGTaaa                                                                                                                                                                                                                           >  1:156730/1‑239 (MQ=255)
           ggtctgtaagccattgtaTAAGGTCTTTAATAATTTTCAGATGGGACTTAAATCTGCCTTTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTAGGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAggg                                                                                                                                                                                                                        <  2:314321/222‑1 (MQ=255)
           gccctgacaTCCATGCGATGAGATCCTGAATAATTTTCTGAAGGTACATAAATCTGCCTCTTTTCAGTGTGCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCTAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAggg                                                                                                                                                                                                                        <  1:98914/231‑1 (MQ=255)
           gcccGTTAATCCTTGAGATAAGGTCCTGAATAATTTTCTTATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAAGTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAggg                                                                                                                                                                                                                        <  2:733348/236‑1 (MQ=255)
           gCTCGTCAATCCATGCGATAAGATCCTGAATAATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAggg                                                                                                                                                                                                                        <  1:1159545/239‑1 (MQ=255)
             tCGTCAATCCATGCGATAAGATCCTGAATAATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGGATCGGGGCTGAGTTTCTTTGAAAGTAAAGGGtt                                                                                                                                                                                                                      >  1:1204249/1‑239 (MQ=255)
              cGTCAATCCATGCGATAAGATCCTGAATAATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGGACCGGCGCTGCATTTCTTTTGAAGTAAAGGGTTg                                                                                                                                                                                                                     >  1:980821/1‑239 (MQ=255)
              cGTCAATCCATGCGATAAGATCCTGAATAATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGCTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGACAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTCTGGCGGAGTCCGGGCCGCCTTTTCATGAAAGAATAGGGtcg                                                                                                                                                                                                                     >  1:1045735/1‑237 (MQ=255)
               gttcaTCCTTGCTATAAGTTCCTGAATAATTTTCTGGTGGGGCATAAATGTGCCTCTTTCCAGTGTTCAGTTCGTTAATTCATCTTGTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAAGTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGa                                                                                                                                                                                                                    <  2:1020802/235‑1 (MQ=255)
               gTCAATCCATGCGATAAGATCCTGAATAATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGa                                                                                                                                                                                                                    <  1:423885/239‑1 (MQ=255)
                tCAATCCTTGCGATAAGATCCTGAATAATTTTTTGATGGGACATAAATCTGCCTTTTTGCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGAt                                                                                                                                                                                                                   <  2:1111805/239‑1 (MQ=255)
                  aaTCCATGCGATAAGATCCTGAATAATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCCGCCTTTCTTTGAAAAGAAAAggggggata                                                                                                                                                                                                                  >  2:470933/1‑233 (MQ=255)
                    tCCATGCGATAAGATCCTGAATAATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATATGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGCTTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCAAGTCTTAGACAAAAAAGGGGTGATTagc                                                                                                                                                                                                               >  2:1151629/1‑237 (MQ=255)
                     ccATGGGATAAGATCCTGAATAATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCa                                                                                                                                                                                                              <  1:1160004/239‑1 (MQ=255)
                     ccATGCGTTAAGATCCTGAATAATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTTTGCAGTTCTTTAATTCATCTGTTTGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCTATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCa                                                                                                                                                                                                              <  1:505623/239‑1 (MQ=255)
                     acttgcttttagtccctatataatTTTCTGTGGGGACTTAAATCTCCCTCTTTCCAGTGTTGCGTGCGTTACGTCATCTGTGGGGGAGAAAAAGTCCACACAGAAAATTGAGGCAAAGCGATTTAAGGAAAAGAAAGTACCGCTTATTAAAGCGCTGCTAACCCCCGTTGAAGTGGCGAAACGCAGCAGTGTGGCGGTAACGGCGCTGCATTTCTATGAAAGTAAAGGGTAGAGTACCa                                                                                                                                                                                                              <  2:783872/220‑1 (MQ=255)
                       ctggtaTAAGTTCCTGATTAATTTTCTGATGGGACATAAATTTTCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGt                                                                                                                                                                                                            <  2:686351/234‑1 (MQ=255)
                             tAAGATCCTGAATTATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGt                                                                                                                                                                                                      <  1:1361697/239‑1 (MQ=255)
                                     tGAATAATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCCGTTCTATGTACATAAAAGGGTGGTGACAAGAATCCGTAACaaagg                                                                                                                                                                                              >  2:1361697/1‑235 (MQ=255)
                                     tGAATAATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGCGTGGCGGGATCGGCCCGGCAGTTCTTTGGAACAAAAGGGTTGGTTACCAGATTCCggtacaaccg                                                                                                                                                                                              >  2:837920/1‑230 (MQ=255)
                                       aataatTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGGATCGGCGCTGCCATTTTATGCAAGACAAGGGGTGGTTAACAGCAACCGaaaaaagggga                                                                                                                                                                                            >  2:251599/1‑231 (MQ=255)
                                            ttttCCGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGGTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAg                                                                                                                                                                                       <  1:27016/239‑1 (MQ=255)
                                              ttCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTTTGAAAGTAAAGGGTTGATTACCCGTATCCGTAAAAGCGGCaacaaacg                                                                                                                                                                                     >  1:145789/1‑233 (MQ=255)
                                               ttttaTGGGACATAAATCTGCCTTTTTTAAGTGTTCAGTTCGTTAATTCATTTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAgcgg                                                                                                                                                                                    <  2:145789/235‑1 (MQ=255)
                                               tttGATGGGCAATAAATTGGCCTCTTTTCAGTGTTCAGTTCGTTAATTTCTCTGTTGGGGAGTATAATTCCCCAATTTAACTTGAGGTAAAGCGATTTAGGGAAAAGAAATTACACCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAAAAGCGGCAATCAgcgg                                                                                                                                                                                    <  2:1045735/237‑1 (MQ=255)
                                               gcTGATTGGACAGAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAgcgg                                                                                                                                                                                    <  1:1146325/238‑1 (MQ=255)
                                               agagacaggACATAAATTTGCCTTTTTTCAGTTTTCAGTTCGTTAATTCATGTGTTGGGGATTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAgcgg                                                                                                                                                                                    <  2:1085514/232‑1 (MQ=255)
                                                 tGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTGTCGGCGCTGCCTTTCTTTTAAAGGAAAAGGGGGAGTACCAGTATCCCAAAAACCGGCAAACacggggg                                                                                                                                                                                  >  2:445528/1‑233 (MQ=255)
                                                 tGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCCGCATTTCTTTGAAAATAAAGGGGTGATTACCCGTAACCGGAACAACGGCAATCAgcggcg                                                                                                                                                                                  >  2:1008014/1‑239 (MQ=255)
                                                     gggACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGatat                                                                                                                                                                              <  2:364262/239‑1 (MQ=255)
                                                      ggACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCCTTTCTATGAAAGTAAAAGGGTGGTTACCAGAATTCCTAAAAACGGGaaaaaacggggaacaa                                                                                                                                                                             >  2:267084/1‑225 (MQ=255)
                                                      ggACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATCAAAATAAAAGGTTGGTTACCAGGAACCGTaaaccggggaaaaaacggggaaaaa                                                                                                                                                                             >  2:922803/1‑216 (MQ=255)
                                                        aCATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATaa                                                                                                                                                                            <  1:1115655/238‑1 (MQ=255)
                                                            aaaTCTGCCTTTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTg                                                                                                                                                                       <  1:428860/239‑1 (MQ=255)
                                                               ttcgCCTTTTTTCAGTTTTTAGTTCGTTAATTTACTTGTTGGGGAGTATAATTCCTCAAGTAAACTTGAGGTAAAGGGATTTAGGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGAtg                                                                                                                                                                    <  2:156730/236‑1 (MQ=255)
                                                                  gCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGCAAGTAAAGGGTTGATTACCAGAATCCGTAAAAACGGCAAACAGCGGCGGTATaaaagccggctct                                                                                                                                                                 >  1:1085514/1‑229 (MQ=255)
                                                                   ccTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGGTGATTACCAGTATCCGTAACAGCGGGAATCAGCGGCGGTTTATACGTGATgtgtg                                                                                                                                                                >  1:888961/1‑238 (MQ=255)
                                                                   ccTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAACGGTGTGGCGGTATCGGCGCGTCATTTCTTTTGAAGTAAAGGGGTGATTTCCAAGATCCCTTACAGCGGCAATCAACAGCGAAATaaaaagggggggtt                                                                                                                                                                >  2:983642/1‑228 (MQ=255)
                                                                    ctttttctcgtgtTCAGTTCGGTAAGTCATGGGGTTGGGTGTAAAAGCCCCAAAGTTAACTGTAGGTAAAGCGATTTACGGAAAAGAAAATACCCCGCATTAAAGCGCTGCTAACCCCCGGCTAAGTGGCGAAACGGAGCGGGGTGGCGGTAGCGGCGCTGCATGTCTATGAAAGTAAAGGGTTGATTACCGGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTg                                                                                                                                                               <  2:974262/230‑1 (MQ=255)
                                                                      tttttCAGTGTTCAGTTCGTTAATTCATCTTTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAAGTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCg                                                                                                                                                             <  1:298825/238‑1 (MQ=255)
                                                                      ctTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGGATCGGCGCTGCCTTTCTATGAAAGGAAAGGGGTGATTACCAGAATCCGTAACACAGGCAATCAACGGGGGATTAAACGGGAGGCGTTGCg                                                                                                                                                             >  1:906297/1‑239 (MQ=255)
                                                                           cAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATg                                                                                                                                                        <  1:445528/239‑1 (MQ=255)
                                                                                ttCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAgcgg                                                                                                                                                                                    <  1:111801/206‑1 (MQ=255)
                                                                                ttCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGGATAGGCGCTGCCTTTCTATGAAAGGTAAGGGGTGGTTACCAGTATCCGTAACAACGGCAATCACCGGCGAGATAAAAGTGATTGGTTGCGGTATGTTGcg                                                                                                                                                   >  1:1157070/1‑238 (MQ=255)
                                                                                     ttCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAGCGTGATGTGTTGCg                                                                                                                                                             <  1:734953/224‑1 (MQ=255)
                                                                                          tAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCaaaa                                                                                                                                         <  1:228175/239‑1 (MQ=255)
                                                                                          tAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCCGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGGTATAAAAGTGATGTGTTGGGATATTTTTCAATTATCaaaa                                                                                                                                         >  1:655296/1‑239 (MQ=255)
                                                                                               tctttgtgGGGGAATTAAATTCCTGAATGTTACTTGAGGTAAAGGGAATTAAGGAAAAAAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCt                                                                                                                                    <  2:1204249/235‑1 (MQ=255)
                                                                                               tatcttgtGGGGAATATAATTCCTCAAGTTAACTTGAGGGAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCGGGGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCt                                                                                                                                    <  2:655296/232‑1 (MQ=255)
                                                                                               cATCTTGTGGGGAGTATAATTCCCAAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCt                                                                                                                                    <  1:1256675/239‑1 (MQ=255)
                                                                                               cATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCt                                                                                                                                    <  1:1128614/239‑1 (MQ=255)
                                                                                               cATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCt                                                                                                                                    <  1:1151629/239‑1 (MQ=255)
                                                                                                aTCTGTTGGGGAGTATAATTCCGCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTc                                                                                                                                   <  1:817725/239‑1 (MQ=255)
                                                                                                 tCTGTTGGGGAATATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCa                                                                                                                                  <  1:279401/239‑1 (MQ=255)
                                                                                                  cTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAg                                                                                                                                 <  1:267084/239‑1 (MQ=255)
                                                                                                               taATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTTTCCGCCCCGCCTTTTTATGAAAAGAAAAGGTTTGTTAACCGGACCCGTAAAACCGGCAATAAGCGCCCATATAAAACTGCTTTTTTTGGATTTTTTGCAATATTCAAAATTGCTTAACCGATTGTCAtt                                                                                                                     >  2:937909/1‑238 (MQ=255)
                                                                                                                     cTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCCGCCTTTCTATGAAAGACAAAGGGTGATTTCCCGTATCCGCACCAGCGGCCAATAGCGGCGAGATAAAACCGGTTGGTTTCGATATGTTTCAAATAACAAAAATGCACAACGAAtttgattttccccgg                                                                                                              >  2:74497/1‑226 (MQ=255)
                                                                                                                       cAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGAtata                                                                                                                                                                             <  2:1069802/174‑1 (MQ=255)
                                                                                                                       cAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCg                                                                                                            <  1:470933/239‑1 (MQ=255)
                                                                                                                       cAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAAGGGTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGAtata                                                                                                                                                                             >  1:1069802/1‑174 (MQ=255)
                                                                                                                         aGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCCGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTTCGATATGTTGCAATTATCAAAATTTGTCAGCGTATTGGCATTCCGCCGGGGa                                                                                                           >  1:1102514/1‑238 (MQ=255)
                                                                                                                          gTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGGAAGTaaa                                                                                                                                                                                                                           >  1:313845/1‑125 (MQ=255)
                                                                                                                          gTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTaaa                                                                                                                                                                                                                           <  2:313845/125‑1 (MQ=255)
                                                                                                                          gTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTAt                                                                                                                                              <  1:871832/202‑1 (MQ=255)
                                                                                                                           ttAACTTGAGGTAAATCGATTTATGGAAAAGGAATTACCCGGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCa                                                                                                        <  1:729589/239‑1 (MQ=255)
                                                                                                                                ttGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGt                                                                                                   <  1:251599/239‑1 (MQ=255)
                                                                                                                                 tGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTg                                                                                                  <  1:1276159/239‑1 (MQ=255)
                                                                                                                                            caTTGATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGGGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTg                                                                                         <  1:531018/236‑1 (MQ=255)
                                                                                                                                                tttGGAAAAGAAATTCCCCCGCATTAAAGCCCGGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTAACGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGGTTCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCgtgt                                                                                   <  2:353550/237‑1 (MQ=255)
                                                                                                                                                tATGGAAAAGAATTTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCgtgt                                                                                   <  1:1037/239‑1 (MQ=255)
                                                                                                                                                tATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGCTATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCCCTGGCGGCCATTGGTGAAGCGTTTggggggt                                                                                   >  1:407667/1‑234 (MQ=255)
                                                                                                                                                      aaaGAAATTACCCCGCTTTAAAGCGCTGCTAACCCCCGGGGAAGGGGCGAAACGGGGCGGTGTGGCGGTTTCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCg                                                                             <  2:269433/239‑1 (MQ=255)
                                                                                                                                                           aaTTACCCCGCATTAAAGCGCTGCCAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAggg                                                                        <  1:922803/239‑1 (MQ=255)
                                                                                                                                                                   cGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGtt                                                                <  1:289964/239‑1 (MQ=255)
                                                                                                                                                                   cGCATTAAAGCCCTGCAAACCCCCGGCGAAGTGGGGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGtt                                                                <  2:407667/239‑1 (MQ=255)
                                                                                                                                                                      cgtAAAGCGCTGCTAACCCCCGGGGAAGTGGAGAAACGCGGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAggg                                                                        <  2:928085/226‑1 (MQ=255)
                                                                                                                                                                          aaGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGGTATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAAGGCATACGTTAAGTGCg                                                         >  1:1057713/1‑239 (MQ=255)
                                                                                                                                                                           aGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTAGCCGTAACAGTGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGa                                                                                                 <  1:1217817/198‑1 (MQ=255)
                                                                                                                                                                                tgctAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTTGCATTCCGCTGGCGGCCCTTTGTGAAACGTTTGGCGGGTTGCCCGCAGGGCAAACGTTAAgctgtcttttt                                                   >  1:928085/1‑229 (MQ=255)
                                                                                                                                                                                              gAAGTGGCGAAACCGAGCGGTGGGGCGGTATCGGCGCTGCAGTTCTATGAAAGTAAAGGGTTGATTACCAGTAGCCGTAACAGCGGCAATCATCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCttt                                      <  1:740623/238‑1 (MQ=255)
                                                                                                                                                                                                             cggggTGTTGGGGTTTGGGCGGTGCATTTTTATTAAAGTAAAGGGTTGATTACCATTATGCGTAACAGCGGCAATCAGCGGCGATATAAACGGTATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCgag                       <  2:535030/235‑1 (MQ=255)
                                                                                                                                                                                                             aGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCgag                       <  1:1008014/238‑1 (MQ=255)
                                                                                                                                                                                                                           ttCGGCGTTTCATTTCTTTGAAAGTAAAGGGTTGATTTCCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGgc        <  2:980821/238‑1 (MQ=255)
                                                                                                                                                                                                                           aTCGGCGCTTCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGgc        <  1:353038/239‑1 (MQ=255)
                                                                                                                                                                                                                           aTCGGCGCTGCTTTTTTATGAAAGTAAAGGGTTTGTTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGgc        <  2:906297/239‑1 (MQ=255)
                                                                                                                                                                                                                            tctgcgtttctttttTATAAAAGTAAAGGGTTGATTTCCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATGTTCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGgcg       <  2:1157070/228‑1 (MQ=255)
                                                                                                                                                                                                                            tCGGCGCTGCATTTCTATGAAAGAAAAGGGTTGGTTTCCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGGTATGTTGCAATTATCAAAATTTCTCAGCGTATTGGGATTCCGCTGGCGACCATTTGGTAAGGGTTTGGCGGGTTGGCCGAACGGCATACGTTAAATGGGGAAGGGGGGGAACAGCATTTGTCCCAAAgggggagagaggtgggaagggg       >  2:321494/1‑219 (MQ=255)
                                                                                                                                                                                                                                 gttgtaTTTCTTTGAAAGTAAATTGTTTGTTTCCGGTGTCCGTAACAGGGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTc  <  2:120167/234‑1 (MQ=255)
                                                                                                                                                                                                                                 gcTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCAtt   <  1:983642/238‑1 (MQ=255)
                                                                                                                                                                                                                                    gCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCa                               <  2:440028/207‑1 (MQ=255)
                                                                                                                                                                                                                                    gCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCa                               >  1:440028/1‑207 (MQ=255)
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                    
CTGGTCAATATGCTCGTCAATCCATGCGATAAGATCCTGAATAATTTTCTGATGGGACATAAATCTGCCTCTTTTCAGTGTTCAGTTCGTTAATTCATCTGTTGGGGAGTATAATTCCTCAAGTTAACTTGAGGTAAAGCGATTTATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTC  >  NC_000913/4277323‑4277786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: