Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 540,600 A→T 10.1% L12F (TTA→TTT)  ybbY → putative uracil/xanthine transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913540,6000AT10.1% 345.0 / 2.3 124L12F (TTA→TTT) ybbYputative uracil/xanthine transporter
Reads supporting (aligned to +/- strand):  ref base A (33/76);  new base T (11/4);  total (44/80)
Fisher's exact test for biased strand distribution p-value = 2.59e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.97e-01

Only 100 of 124 total aligned reads displayed.

ATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCT  >  NC_000913/540363‑540824
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                    
aaccccACAAAGTCAGCCCGTATGTTGGCCTTTCCATTGGCGCGCGTATCCCGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCTCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTAt                                                                                                                                                                                                                                     <  1:1009880/235‑1 (MQ=255)
    ccACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTTT‑CC‑CGTTTAGGGGTGTTTATGTTCAATTTTTCGGGCAGCCGCGGAAACCCGTTTTCC‑gg                                                                                                                                                                                                                                >  1:372403/1‑239 (MQ=255)
    ccACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGGGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGCTATTTC‑CC‑GGTAAAGG‑GGGGTTATGTTCTATTTTGACGTCGGCCGGGAGAAACTGTTAttcga                                                                                                                                                                                                                                 >  1:429436/1‑235 (MQ=255)
          aGTCACCCCTTTTTTTGGCCGTACCCTTGGCGCGCGTATCACGAAAACCATCTTACGTGGGGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCa                                                                                                                                                                                                                          <  2:478623/239‑1 (MQ=255)
                          gggcGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTACAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑tt                                                                                                                                                                                                       <  1:1041511/236‑1 (MQ=255)
                          ggCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑CTTCT‑CC‑CGTTAAGGTGGGTTTATGTTCAATTTTTCAGTCAGCCCCGGAAACCCGTTATAA‑GGCTTTTAGT‑G‑GTGTTTCtttt‑tt                                                                                                                                                                                                       >  1:729088/1‑239 (MQ=255)
                              gTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTTTGTTCAATTTTTCAGTCAGCCGCGCAAACCCGGTATCA‑GGATTTTTGG‑T‑GGTTTTCtttt‑tttttt                                                                                                                                                                                                   >  1:997606/1‑239 (MQ=255)
                               tccctttgggcggcgTATCACGAAATCCCTCTTACGTGGTGAGGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAAGCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTg                                                                                                                                                                                                  <  2:75173/227‑1 (MQ=255)
                                tccATTGGGGCACGTATCACGAAAATCAACTTACGTGGTGATTGGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTg                                                                                                                                                                                                  <  1:518518/237‑1 (MQ=255)
                                    tttgcgcgcGTATTCCGAAAACCCTTTTGCGTGGTTGTGTGGATTACGACATTGAACAGGGGTTCCCTGGTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAACCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAaca                                                                                                                                                                                             <  2:394844/236‑1 (MQ=255)
                                    ttGGTGCGGGTTTCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAaca                                                                                                                                                                                             <  2:40282/239‑1 (MQ=255)
                                     tgggcggcgTTTCACGAAAACCATCTTACGTGGTGATGTGATTTACGCCATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAacac                                                                                                                                                                                            <  2:862854/233‑1 (MQ=255)
                                     tGGCGCCGGTTTCAAGAAAACCATTTTACGGGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAacac                                                                                                                                                                                            <  2:729088/239‑1 (MQ=255)
                                          cgcgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGGTCAGGGGTGTTTATGTTCCATTTTGCCGTCAGCCGCGAAAGCCTGTTATCG‑AGGTTTTTGT‑G‑GTTTTTCTTTA‑TTTTTTGCCACAAGGttt                                                                                                                                                                                       >  1:679891/1‑238 (MQ=255)
                                          cgcgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑AATCT‑CC‑CGGTAAGGGGGGGTTATGGTCAAATTTTCAGTCAGCCCCGAAAGCCTGTTTTTA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAAAACGGGtg                                                                                                                                                                                       >  1:950964/1‑239 (MQ=255)
                                            cgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGG‑ATTCT‑CC‑GGTTAGAGGGGGTTTATGTTTAATTTTGCAGTCACCCCCGCAAGCCTTTTTTTC‑GGGTTTCTGTGG‑GTTTTTTTTTT‑TTTTTTTCAACAGGGtgtg                                                                                                                                                                                      >  2:406543/1‑236 (MQ=255)
                                            cgTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTTAGGGGGGTTTATGTTCCATTTTTCCGTCAGCCGCGCAAGACCGTTATCA‑GGGTTTTAGT‑G‑GTTTTTCTTTT‑TTTTTTTCTACACCGGtgtg                                                                                                                                                                                     >  1:65955/1‑239 (MQ=255)
                                               aTCCCGAAAACCCTCTTGCGGGGGGATGTTATTTTCGGCATTTAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAAGCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGtt                                                                                                                                                                                  <  2:1272716/239‑1 (MQ=255)
                                                 cccGAACACCATCTTTCGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTTTTGCGCGGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTtcc                                                                                                                                                                                <  2:674317/237‑1 (MQ=255)
                                                        cccATTTTTCCTGGTGATGTGATTTACGACATTGAACGGGGCTTCCCTGGTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACg                                                                                                                                                                         <  2:657563/238‑1 (MQ=255)
                                                        aCCATTTTACGTGGTGATGTGATTTACGGCATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACg                                                                                                                                                                         <  1:220315/239‑1 (MQ=255)
                                                        aCCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACg                                                                                                                                                                         <  1:962702/239‑1 (MQ=255)
                                                           aTCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGCAAGACTGTTTTCC‑GGGTTTCCTT‑G‑GTTTTTCTTTA‑TTTTTTGTAAAACGGTTGTGGTTCCTCCCACGcc                                                                                                                                                                       >  1:1261000/1‑237 (MQ=255)
                                                              ttACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAGACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGGGTGTTTATGTTCAATTTTTCAGGCAGCCGCGAAAGCCTGTTATTT‑GGATTTCAGG‑G‑GGTTTTCTTTT‑TTTTTTTCAACAAGGTTTTGTGTCCTCCTACGGCACtt                                                                                                                                                                   >  2:531921/1‑239 (MQ=255)
                                                               tcctgggtgggttgttttACGACTTTGAACGGGGCTTCCCTGTTGCGCCCAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACttt                                                                                                                                                                  <  2:1252467/224‑1 (MQ=255)
                                                                 cGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGGGTGTTTATGTTCAATTTTGCAGGCAGCCCCGAAAGCCTGTTATCA‑GGGTTTTAAT‑G‑GGTTTTTTTTT‑TTTTTTTCAAAACGGTTTTGGTTCCTCCTCCGCTACttttt                                                                                                                                                                >  1:474000/1‑237 (MQ=255)
                                                                     gtgatgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGGTAAGGGGTGTTTTTGTTCAATTTTGCAGTCAGCCCCGAAAGCCCGTTATCA‑GGATTTACGT‑G‑GGTTTTCTTTA‑TTTTTTTCAACACGGGTTTGGGTCCTCCTCCCCGACTTTCTGCtt                                                                                                                                                            >  1:1080003/1‑239 (MQ=255)
                                                                      tgatgtgatTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGGTAAGGGGTGTTTATGTTCAATTTTGCAGTTCGCCCCGCAAGCCTGTTATCA‑GGATTTTAGT‑G‑GTTTTTCTTTA‑TTTTTTTCCACACGGTTGTGGTTCCTCCCACGCTACTTTTTGCttt                                                                                                                                                           >  1:1267629/1‑239 (MQ=255)
                                                                                tACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑CGTTAAGGTGGGTTTTTGTTCAATTTTTCAGTCAGCCCCGAAAGCCCTTTATCA‑GGGTTTTCGT‑G‑GGTTTTCTTTT‑TTTTTTTCAACACGGTTTGTGTTCCTCCTTACCTTCTTTCTTTTTTTCAGTTTcc                                                                                                                                                  >  1:414693/1‑238 (MQ=255)
                                                                                  ccgactttaaCCGGGCTTCCCTTTTGCGCCGAAAGGTCCATTTATCCTTAAACATCAGCAGTAATCGGGCCCCGGCAATGCCCGGCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCa                                                                                                                                               <  2:1317139/231‑1 (MQ=255)
                                                                                  cGACATTGAACAGGGCTTCCGTGTTGCGCCGAAAGGTCAATTTATCCGTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCa                                                                                                                                               <  1:292796/239‑1 (MQ=255)
                                                                                  cGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGG‑CATCT‑TC‑GGTTTAGGTGTGTTTATATTTTATTTTTGAATCAGCCCGGGAAGACCGGTATTC‑GGGTATGCGG‑G‑GTTTTTTTTTATTTTTTTGCAA‑ACGGGTGTTGTTTCTCCCACGCCCCTTTCTGGTTTTCAATTTGCGCa                                                                                                                                               >  2:1257318/1‑239 (MQ=255)
                                                                                  cGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGt                                                                                                                                                                                   <  1:1364628/203‑1 (MQ=255)
                                                                                     cATTGAACAGGGCTTCCATGTTTCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCa                                                                                                                                               <  1:1005280/236‑1 (MQ=255)
                                                                                         gAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCGTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGc                                                                                                                                        <  1:406543/239‑1 (MQ=255)
                                                                                         gAACAGGGCTTCCCGGTTGGGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTTCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGc                                                                                                                                        <  1:527335/239‑1 (MQ=255)
                                                                                               ggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCTCCC‑GGTTAAGG‑GTGGTTATTTTCCATTTTTCCGTCAGCCGCGAAAACCTGTTATCAGGGATTTC‑GT‑G‑GGTTTTTTTTT‑TTTTTTTCACACCGGTTGTGGTTTCCCCTACCCTCCTTTTTTCtttttcgtttgcccaaaagaccctgct                                                                                                                                   >  2:583211/1‑215 (MQ=255)
                                                                                               ggCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTTAGGGGGGTTTTTGTTCTATTTTGTAGTCAGCCGCGAAAAACCGTTATAC‑GGGATTCTGTGG‑GTTTTTTTTTT‑TTTTTTTCAA‑ACGGTTGTGGTTCCCCCTTCACGCCTTTCTGTTTTTTATTTGCCCGAAAgaaacgctccc                                                                                                                                  >  2:1005280/1‑229 (MQ=255)
                                                                                                tcTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCt                                                                                                                                   <  1:538914/236‑1 (MQ=255)
                                                                                                    cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑CTTTT‑CC‑GGGTTAGGGGGGTGTATTTTTCATTTTGCAGTCAGCCGCCGAAGCCTGGTTTCA‑GGATTTTATG‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGGTGGTGTGTCTCCCACGCTCCTTTCTTCTTTTCAGTTTCCGCCAAAGAGCCCCCTTACGc                                                                                                                              >  2:1197987/1‑238 (MQ=255)
                                                                                                    cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑CTTCT‑CC‑TGTTAAGGTGTGTTTATGTTCAATTTTGCCGTCAGCCGCGGAACCCTGTTATAA‑GGGTTTCTTG‑G‑GTTTTTTTTTT‑TTTTTTTCAACACGGTTGTGGGTCTCCCTCCGCTACTTTTTTCTTTTTTGTTTTCGCACAGGAGcactcttaccc                                                                                                                              >  2:495442/1‑228 (MQ=255)
                                                                                                    cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGGGGGGTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTTGTATCA‑GGATTTCCGT‑G‑GGTTTTCTTTT‑TTTTTTTCAACACGGTTTGGGTTCTCCCTAGCACACTTATTTCTTTTTAGTTTCCGCAAAGTAGcgcgtttaacc                                                                                                                              >  2:679232/1‑228 (MQ=255)
                                                                                                    cccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑CGTTAAGGTGTGTTTTTGTTCCATTTTGCCGTCAGCCGCGAAAGCCCGTTTTTC‑GGATTTTAGT‑G‑GTTTTTTTTTT‑TTTTTTGCTACACGGTTTTGGGTCCTCCCCCCCCACTTTTTGCTTTTTTGTTGCCCCCAAGACGCCCGCtttccc                                                                                                                              >  2:842352/1‑234 (MQ=255)
                                                                                                     ccTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATTCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTc                                                                                                                            <  1:305822/239‑1 (MQ=255)
                                                                                                     ccTGTGGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTc                                                                                                                            <  1:388235/239‑1 (MQ=255)
                                                                                                      cTGTTGCGCCCAAAGTCTAATGTTTTCTTGAACATCAGCAGTAGTCTGGACCCTGAAATCCCCGTCGCTCCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTACGTGGAATTTTGCAGTCAGGCGCGAAAGCCTGGTATCA‑GGATTTCCGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTCGCCGCAAAGTAGCCTGCTTACGCTCa                                                                                                                           <  2:1052035/239‑1 (MQ=255)
                                                                                                         ttGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑CTTCT‑CC‑GGTTCAGGTGTGTTTTTGTTCAATTTTGCAGGCCGCCGCGCAAGCCCGTTTTCA‑GGTGTTCAGT‑G‑GTTTTTCTTTT‑TTTTTTTCAACCCGGTTGTTGTTCCTCCTCACCTCCCTTTTTCTTTTTAGTTGCCCCCAAAGAGTCTCCTTACGCCCACGc                                                                                                                        >  2:1374872/1‑239 (MQ=255)
                                                                                                          tGCGCCGAAGGGTCAATTTATCCTTAAACATCATCAGTAATCGGGCCCCTGCAATGCCCGTCCTTGCGGCGGTC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCGCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCa                                                                                                                       <  1:63240/239‑1 (MQ=255)
                                                                                                           gcgcCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAAGGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCaa                                                                                                                      <  1:209131/239‑1 (MQ=255)
                                                                                                                      tCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCtttt                                                                                                             <  1:842352/237‑1 (MQ=255)
                                                                                                                       taaTTTATCCTTAAACTTCAGCAGTAATCTGGCCCCTGCAATGCCCGTGCTTGCGGCGGGC‑ATTCG‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCt                                                                                                           <  1:836241/237‑1 (MQ=255)
                                                                                                                       cAATTTATCCTTAAACCTCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCt                                                                                                           <  1:160095/238‑1 (MQ=255)
                                                                                                                                cTTAAACCTCAGCAGTAAGCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑TTTCT‑CC‑GGTTAAGGTGTGTTTATTTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCa                                                                                                 <  1:779106/239‑1 (MQ=255)
                                                                                                                                cTTAAACAGTAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCa                                                                                                 <  1:203772/239‑1 (MQ=255)
                                                                                                                                        tCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGGGTGTTTATGTTCAATTTTTCAGTCAGCCGCGAAAGCCTGTTATCA‑GGGTTTCAGG‑G‑GTTTTTCTTTA‑TTTTTTTCAACACGGTTGTGGGTCCTCCTACCCTACTTTCTTCTTTTTTTTTGCCCCCAAGTAGCCTGCTTACGCTCACCCAAAATGTTTTTTTTTCTACCGCACCGGCCt                                                                                          >  2:1098944/1‑238 (MQ=255)
                                                                                                                                          cgcggTAATTTGGCCCCTTCAATTCCCGTCCTTGCGGGGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTTCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTGTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCt                                                                                       <  2:679891/235‑1 (MQ=255)
                                                                                                                                             attattcgggCCCCTGCAATTCCCGTCTTTCGGGCGGGC‑ATTTC‑CC‑GGTTAAGGTGGGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCt                                                                                       <  2:1267629/228‑1 (MQ=255)
                                                                                                                                             agTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCtt                                                                                      <  1:1214556/237‑1 (MQ=255)
                                                                                                                                               tAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCC‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTGCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAata                                                                                                                    <  1:732519/205‑1 (MQ=255)
                                                                                                                                                aaTTTGGCCCCTGCATTGCCCGTCCTTGCGGCGGGC‑CTTCC‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCg                                                                                    <  2:128078/236‑1 (MQ=255)
                                                                                                                                                 agttGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCa                                                                                                 <  1:677710/219‑1 (MQ=255)
                                                                                                                                                  tCTGGCCCCGGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAg                                                                               <  1:317415/239‑1 (MQ=255)
                                                                                                                                                      gCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTTAGGTGTGTTTTTGTTCAATTTTTCAGTCAGCCGCGAAAACCTGTTATCA‑GGATTTTAGT‑G‑GGTTTTTTTTT‑TTTTTTGCCACAAGGTTTTGGTTCCTCCTACGCTCCTTTCTTCTTTTCAGTTGCCGCAAAGTAGCCCGCTTACGCTCACCCAATATGCTTTTCTTTCTACCGCACTGGCCTGCTTCGCCTAGGCGt                                                                           >  1:1354322/1‑239 (MQ=255)
                                                                                                                                                           tGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTTTGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTTCCGCAAAGGAGCCTGCTTACGCTCACGCAATATGCTTTTTTTGCTACCGCACCGGCCTGCTTCGCTCAGGCGgttttc                                                                      >  1:826301/1‑237 (MQ=255)
                                                                                                                                                           tGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTTCATTTTTCAGTCAGCCGCGAAAGCCTGTTATCA‑GGGTTTCAGT‑G‑GGTTTTCTTTA‑TTTTTTGCAACACGGGTGTGGTTCCTCCTACGCTCCTTTCTGCTTTTTTGTTTCCGCCAAGAAGCCTGCTTACGCTCACCCCATATGCTTTTTTTTCTACCGCACTGGCCTGCTTctttctcttaaaaaa                                                                       >  2:677710/1‑224 (MQ=255)
                                                                                                                                                                tGCCCGTCCTTGCGGCGGGC‑ATTCT‑CCGGGTTAAGG‑GGGGTTATGTTTCATTTTGCAGTCAGCCGCGAAAGCCTGGTATCA‑GGGGTTCAGT‑G‑GTTTTTTTTTA‑TTTTTTTCCACACGGGTTTGGGTCCTCCTACGCTACTTTCTTCTTTTTAGTTGCCCCACAGTAGCCCGCTTACTCTCCCCCACTAAGCTTTTCTTGTTCCCCCACCGGCCCGCTTCGCTCCGGCGgttttctggc                                                                  >  2:213432/1‑232 (MQ=255)
                                                                                                                                                                     gTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGGGTGGTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCCCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCAtcgt                                                             >  1:350094/1‑238 (MQ=255)
                                                                                                                                                                      ttcTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCAtcgtcg                                                           <  1:531921/237‑1 (MQ=255)
                                                                                                                                                                      tCCCTGCGGCGGGC‑ATTCT‑CG‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCATCACGGTTGTGGTTCCTCCTACGCTACGTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCAtcgtcg                                                           <  1:150251/239‑1 (MQ=255)
                                                                                                                                                                       ccTTGGGGGGGGG‑CTTCT‑CC‑GGTTAAGGGTTTTTTATGTTCAATTTTGCAGGCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgc                                                          <  2:997606/239‑1 (MQ=255)
                                                                                                                                                                       ccTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTTTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgc                                                          <  1:422194/239‑1 (MQ=255)
                                                                                                                                                                       ccTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCCGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgc                                                          <  1:640780/239‑1 (MQ=255)
                                                                                                                                                                        cttggcgcggGC‑ATTCT‑CC‑GGTTAAGGTGTTTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg                                                         <  1:1004925/233‑1 (MQ=255)
                                                                                                                                                                        cTTGCGGCGGGC‑CTTGT‑CC‑GGTTTAGGTGTGTTTATGTTCAATTGTGCAGTCAGCCGCGAAAGCCTGGTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg                                                         <  1:407384/239‑1 (MQ=255)
                                                                                                                                                                        cTTGCGGCGGGC‑ATTTT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg                                                         <  1:213432/239‑1 (MQ=255)
                                                                                                                                                                          tttgggttggtcttct‑tc‑GGTTAAGGTGTGTTTTTGTTCAATTTTGCATGCATCCGTGAAACCCTGTTATCG‑GGCTTTCAGT‑G‑GGTTTTCTTTA‑TTTTTGGCAACCCGGTTGGGGTTCCTCCTACGCTACTTTCTTCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCgcgc                                                        <  2:73907/227‑1 (MQ=255)
                                                                                                                                                                          tttggggtgggtttttccc‑GGTTAAGGTTTTTTTTTTTTCAATTTTGCAGTCAGCCGGGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACGCGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTcgcg                                                         <  2:162642/222‑1 (MQ=255)
                                                                                                                                                                                   c‑ATTCC‑CC‑GGTTAAGGTGTTTTTATTTTCAATTTTGCAGGCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGa                                               <  1:679232/238‑1 (MQ=255)
                                                                                                                                                                                        tt‑cC‑GGTTAATGTTTTTTTTTTTTCAATTTTGCAGTCCGCCCCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTTCTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGc                                          <  2:474000/238‑1 (MQ=255)
                                                                                                                                                                                               gTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCTTCCCGCTATTATGGAAGGGCCAggg                                     >  2:1207146/1‑238 (MQ=255)
                                                                                                                                                                                                ttAAGGTGTTTTTATTTTCAATTTTGCCGTCGGCCGGGAAAGCCTGTTATCA‑GTATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTGCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGGTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTg                                    <  2:417525/239‑1 (MQ=255)
                                                                                                                                                                                                  aaGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGc                                  <  1:1257318/239‑1 (MQ=255)
                                                                                                                                                                                                      tgtttTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCtg                               <  1:1052581/238‑1 (MQ=255)
                                                                                                                                                                                                      gttttttATGTTCAATTTTGCAGTCAACCCCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACTGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCtg                               <  1:264224/234‑1 (MQ=255)
                                                                                                                                                                                                        tgtTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTgtgg                            >  2:94667/1‑239 (MQ=255)
                                                                                                                                                                                                          tttATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACg                                                                                                                               >  2:791385/1‑138 (MQ=255)
                                                                                                                                                                                                          tttATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACg                                                                                                                               <  1:791385/138‑1 (MQ=255)
                                                                                                                                                                                                             aTGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAATGGCCAGGTGGCCTGTGGTgggg                       >  1:755244/1‑239 (MQ=255)
                                                                                                                                                                                                               gTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTTTGGGGGGGa                      >  1:599032/1‑238 (MQ=255)
                                                                                                                                                                                                                tttaaTTTTGGAGTCAGCCGGGAAAGCCTGTTTGTA‑GGATTTCAGT‑G‑GTTTTTTTTTA‑GTTTTGGAAACCCGGTGGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCGTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAAc                    <  2:372403/236‑1 (MQ=255)
                                                                                                                                                                                                                ttCAATTTTGCATTCATCCGCGAAATCCTGTTTGTA‑GGATTTC‑GT‑GTGTTTTTCTTTT‑TTTTTGGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGAAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAAc                    <  2:1080003/239‑1 (MQ=255)
                                                                                                                                                                                                                  cAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGa                                               >  1:878304/1‑210 (MQ=255)
                                                                                                                                                                                                                  cAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAAcc                   >  1:1008957/1‑238 (MQ=255)
                                                                                                                                                                                                                    aTTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCCCAGGCGTTTTGCGGTCATCTTCGCGCTCTTATGGAAGGGCCAGGTGGCCTGGGGGGGGGAACCaa                 >  2:183793/1‑237 (MQ=255)
                                                                                                                                                                                                                          cAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGt                                                                                                                                                      <  2:101709/99‑1 (MQ=255)
                                                                                                                                                                                                                          cAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGt                                                                                                                                                      >  1:101709/1‑99 (MQ=255)
                                                                                                                                                                                                                                gtcgcaAAAGCCTTTTTTCA‑GGTGTGTCGT‑G‑TTTTTTCTTTA‑GTTTTGGTCACACGGGTGGGGTTCCCCCCACGATGCTTTCTGGTTTGCAGGTGCCGGTAAGTGGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACGGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCAcc    <  2:356882/237‑1 (MQ=255)
                                                                                                                                                                                                                                  ggcgAAAGCCTTTTATCA‑GGATTTTGGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACCCGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGGAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCt  <  2:65955/238‑1 (MQ=255)
                                                                                                                                                                                                                                  cgcgAAAGCCTGTTATCA‑GGATTTCAGT‑T‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCt  <  1:1098944/239‑1 (MQ=255)
                                                                                                                                                                                                                                  cgcgAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTGCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCAcc    <  1:701133/237‑1 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                    
ATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAATCTGGCCCCTGCAATGCCCGTCCTTGCGGCGGGC‑ATTCT‑CC‑GGTTAAGGTGTGTTTATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCA‑GGATTTCAGT‑G‑GTTTTTCTTTA‑TTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCT  >  NC_000913/540363‑540824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑