| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,014,019 | A→G | 14.1% | E254G (GAA→GGA) | pqiB → | paraquat‑inducible, SoxRS‑regulated MCE domain protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,014,019 | 0 | A | G | 14.1% | 217.3 / 2.1 | 76 | E254G (GAA→GGA) | pqiB | paraquat‑inducible, SoxRS‑regulated MCE domain protein |
| Reads supporting (aligned to +/- strand): ref base A (6/57); new base G (9/3); total (15/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTA > NC_000913/1013786‑1014256 | ttttttCCGTGGCTTCCGGGTAGGTTCGGTTGAAACCAGCCCCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAACGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGt < 2:1352244/234‑1 (MQ=255)gttGTTCCGGGGTTTTCGGGTAGGTTCGGTTGAAACCCGCCCCTTCGATCCACAAAAACGCAATATAAGCTATCAACTGTTCATCAATGCACCTTATGGCTGGCTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTc < 2:164715/237‑1 (MQ=255)atgttttaaaaaagaaggggTTGGTTCGGTTGAAACCAGCCCCTTCGATCCCAAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTc < 2:1300911/222‑1 (MQ=255) ttGTTCCCGGGCTTTCGGGGTGGTTTGGTTTAAACCCGCACCTTCGATCCCCAAAAAAGCAATATCAGCCATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTc < 2:826794/237‑1 (MQ=255) cttttCCGTGGCTAGCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCt < 2:466523/236‑1 (MQ=255) cTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTc < 1:152265/238‑1 (MQ=255) tGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACCCAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCt < 1:943574/238‑1 (MQ=255) ttCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGGGTTAGG‑TTTTTTGTGGCGGGAggggtggg > 1:599638/1‑233 (MQ=255) gTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCTGC‑TTTTATGTTCCGGGAGGGCTGTGTTTTAgggtgtctcttttacaca > 1:1300911/1‑223 (MQ=255) tttaaaccgaccccttggtaccacaAAAACGCAAGTACAGCTATCAACTTTTCATCAATTCACCTTATGACCGACTGGTGACCAACAATGGTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑aaa < 2:884387/218‑1 (MQ=255) ccAGCCCCTTCGATACACAAAAACGCAATTCCAGCTTCCAACTGTTCATCAATGCACCTTATGGCCGACTGGTGACCAACAAGGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCGGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCt < 2:464614/239‑1 (MQ=255) cAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCtt < 1:921667/239‑1 (MQ=255) ccTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGAACGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGtt < 1:193400/239‑1 (MQ=255) ttCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCGGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGtttt < 1:1213101/239‑1 (MQ=255) gATTCACAAAAACGCAATATCAGCTATCAACTGGTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTa < 1:758973/239‑1 (MQ=255) tACACAAAAACCAAATTTCAGCATACGACTGTTAAACAATGGCCCTGATGACCGGCTGGGGACCAACAATGATCGCTGCTGGAAAGAGAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCGGAGTGGGGGTGGCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCGTTCGTTTTGGatg < 2:170989/239‑1 (MQ=255) aaaCGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGGGTCAGG‑TTTTATGTGCCGGAGGGGCGT‑GGTTTTGGGCGGCCAGTGGGCCCG‑AAAACAGCTTTCTGTTTGTTTGATGATCa > 1:619585/1‑239 (MQ=255) gCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGtt < 1:526652/221‑1 (MQ=255) ccgCTATCACCCTTTCATCAATGCACCTTTTGGCCGTTTGGTTACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTc < 2:619585/237‑1 (MQ=255) tATCAACGGTTCACCAATGCACCGTATGGCCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAgg < 1:700824/238‑1 (MQ=255) ttaaaCTGTTCAACAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGAt < 1:285084/236‑1 (MQ=255) ttCAACTGTTCATCAATGCACCTTAAGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGAt < 1:1134083/238‑1 (MQ=255) aTCAACTGTTCATCAATGCACCTTATGACCGACTTGTGACCAACAATGTTCGCTTCTGGAAAGATGGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGAt < 1:1325657/239‑1 (MQ=255) aTCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGAt < 1:415017/239‑1 (MQ=255) aTCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGAt < 1:1203093/239‑1 (MQ=255) cAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTTATGTGCCGGGAGGGCTG‑GGTTTAGGGGAGCCCGTGGCACCGAAAAAAAACTTTCGTTTT‑TATATTGATTCGAAAAGGATTCacggttt > 1:229544/1‑233 (MQ=255) acttgtcatcaATGGCCCGTATGACCGACTTGTGACCAACAATGTTCGCTTCTGGAAAGGTCGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGt < 1:1339266/234‑1 (MQ=255) ccTTATGACCGACTGGTGACCAACAATGTTCGCGTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACAt < 1:454109/239‑1 (MQ=255) cTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCt < 1:205923/148‑1 (MQ=255) cTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAggg < 1:534264/158‑1 (MQ=255) ttattgcctattGGTTACCAAATCTGGTCGCTTCTGGAAAGGTAGTGGCATTGCGGTTGAGCTGGCGGCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTg < 2:867566/228‑1 (MQ=255) ttATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTg < 1:801576/239‑1 (MQ=255) tATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTTTTGTGCCGGGAGGGCTG‑GGTTTAGGGGAGCCCGAGGGACCG‑AAAAAAGCTTTTGTTTTTTGTGATTGTCAGAAGAGCATTCAGAGTTTGTTGTAAAcccctaccattta > 1:281175/1‑228 (MQ=255) ggACCGATTGGTGCCCAAAAATGTTGGTTTCTGGAAAGATGGGGGCATTGGGGTTGATCTGACGTCAGGAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGAtt < 2:1263233/238‑1 (MQ=255) aCTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTTGTTGTG‑CGGGAGGGCGG‑GGTTTCGGGCGGGCCGCGGGACCG‑AAAACAACATTCGGTTTTTTTGATGGATAGAAGGGCAGTAATAGTTCGTTGTAAAcccgaccaaatttgtatttac > 2:996113/1‑220 (MQ=255) cGCTTCTGTAAAGTGAGTGGCATTGCGGTTGATCTGACATCAGCAGGGATGCGTGTGGAGAGGGGCTCAGTGACAACGCTGCTGATTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGt < 2:1035627/239‑1 (MQ=255) ttCTGGAAAGGTTGTGGGTTTGCGGTTGATCGGACGTCAGGAGGGATGCGTGGGGGGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTAcg < 2:599638/239‑1 (MQ=255) ttCTGGAAAGATAGTGGCTTTGCGGTTGATCTGACGTAAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTAcg < 1:796207/239‑1 (MQ=255) gcgggAAAGGTAGTGGCAGTGCGGTTGAGCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATGCGGTAcg < 1:243316/235‑1 (MQ=255) gAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGAt < 1:1122526/196‑1 (MQ=255) aTAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGGCGGGAGGGCTG‑GATTTTGGGGAGCCAACGGGACCG‑CAAAAAGCCTTTGGTTTGTTTTATGTTTAGAAGAGGATTCTGGGGTCGTTGTTCACCCCTCACATTGTTTTTATTTTGTTC‑TTTTAATATTTTGTATACGGGCTGcc > 2:169712/1‑237 (MQ=255) aTAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGAt < 1:952167/176‑1 (MQ=255) aGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTTCGC‑TTTTATGTGCCGGGAGGGCTG‑GGTTTAGGGCAGCCCGGGGCGCCG‑AAAAAAGCTTTCGTTTTTTTTTATGATCAGAAGAGGAATCCGGATTCGTTGTTCAACCATCACATTGTTTTTTTTATGTTCTTTTAAAGATT‑GGTACTCGGTCTGCAAcc > 1:968914/1‑239 (MQ=255) ggCATTTCGGTTTAACTGACGTCAGCAGGGATGCGTGTGGAAGTGGGCTCAGTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCggg < 1:508354/239‑1 (MQ=255) gaaTTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCggg < 1:153284/236‑1 (MQ=255) gCATTGGGGTTTATCTGGCGGCAGCGGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGGCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCggg < 2:968914/238‑1 (MQ=255) tGATCTGGCGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGCGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTa < 1:976847/238‑1 (MQ=255) cTGACGCCAGCAGGGATGCGTGGGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGt < 1:1104410/238‑1 (MQ=255) cagcagGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGTAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGt < 1:51742/239‑1 (MQ=255) agcggGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGGTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTa < 1:515737/239‑1 (MQ=255) agcagGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCTGC‑TTTGTTGTGCCGGGAGGTCTG‑GGTTTTGGGGAGCCAGGGGGCACG‑CAAACAGACTTCGTTTTTTATGATGATCAGAAGAGCATTCAGGATTCGTTGTTCACCGATCCCATTTATTATCTTTCGGTC‑TTTTAAAATTTGGCAAGCGGGCGTCCACCGGGGGGTCCGGGAGAGTTTCggggga > 1:1188431/1‑237 (MQ=255) gcagGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGGCCGC‑TTTGATGTGCCGGGAGGGCTG‑GGTTTTGGGCAGCCCGTGGGACCC‑GAAACAGACTTCCTTTTGTTTGATGATCAGAAGAGGATTCAGGGTTCGTTGTACAACGATCACATTTATTTTTTTATTTTT‑TTTTAAGATTTGGGTCGGGGTCTTCAACCCGGGGGTCCGGGAGAGGTCCggggggt > 2:1073638/1‑236 (MQ=255) ggATGGGTGTGGAAGTGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTTAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCg < 1:865981/238‑1 (MQ=255) attcGTGTGGAGATGGGCTCATTGACGACGCTGCTGAGTGGCGGTGTCAGC‑TTGGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGcc < 2:922586/235‑1 (MQ=255) cGTGTGGAGATGGGCTCATTGACAACGCTGGTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTgg < 1:123695/238‑1 (MQ=255) gtgtGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGAtt < 1:456791/162‑1 (MQ=255) tttgGGGATGGGCTCATTGACAACGCTGTTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGt < 2:376061/236‑1 (MQ=255) atggtgaaaagagacgggcggtgctgAGTGGCGGTGTCAGC‑TTTGATGGGCCGGGAGGTTTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGt < 1:565998/217‑1 (MQ=255) gggTTCATTGAAAACGGTGCTGAGTGGCGGTGTCAGC‑TTTGATGGGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTATGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCa < 2:1115786/239‑1 (MQ=255) gggCCCATTGACAACGGGGGGGAGGGGGGGTGTCAGC‑TTTGAGGTGCCGGAAGGTCTG‑GATTTAGGGCAGGCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCa < 2:281175/239‑1 (MQ=255) tgCTCATTTACAACGCTGGTGAGTGGCGGTGGCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCa < 1:394238/237‑1 (MQ=255) gCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGACGTGCCGGGAGGTCTG‑GATTTAGGGCAACCAGTGGCAACG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCCACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCa < 1:886613/237‑1 (MQ=255) aCAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCa < 1:443217/229‑1 (MQ=255) ctgctggtggcgtggttggtttttATGTGCCGGAAGTGCTG‑GATTTAGGGCAGCCAGTGGGACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCCGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTgcg < 2:523148/219‑1 (MQ=255) tGGCGGTTTCAGC‑TTTGATTTGCCGGAAGGTTTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAat < 2:229544/238‑1 (MQ=255) ggCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAata < 1:697276/238‑1 (MQ=255) tCAGC‑TTGGATGTGCCGGGAGGTCTG‑GATTTAGGGCAGCAAGGGGCACCG‑AAAACCGCTGTCGTTTTGTATGATGATTAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCAGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAg < 1:604960/239‑1 (MQ=255) cAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAg < 1:503724/238‑1 (MQ=255) cAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAg < 1:1073638/238‑1 (MQ=255) aGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTCGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGTGCCGAATATGCGTCAg > 1:784698/1‑237 (MQ=255) aGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGACAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGGTGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGGGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGGACCGCAAGCAAAGGGCCATTCTTTGGGCCGAAAATGCGTCGGaa > 2:526053/1‑238 (MQ=255) gATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGTTCCGGAAGAGTTCCGGGGGATTGGCCTGGGAACGGTAAGCAAAGTGCCATTCTTTCCCCCGAACTAGCGTAAGAAATTaaa > 2:1350873/1‑239 (MQ=255) aTGTGCCGGAAGGTTTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAACCAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAAc < 1:566720/239‑1 (MQ=255) tgtgCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTacac < 1:1163518/96‑1 (MQ=255) tgtgCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTacac > 2:1163518/1‑96 (MQ=255) ccGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGGGCCATTCTTTGCGCCGAATATGCGTCAGCCATTTAAGgataa > 1:240075/1‑237 (MQ=255) ggtaaGGTTTT‑GATTTAGGGCAGTCGGTGGGCCCG‑TAAACAGTTTTCGTTTTAGATGATGATCAGGAGATCATTCAGTATTGGTTGTACACCTATCGCGTTGATTAGCTGATGTTC‑TGTAAAGGTTCGGTACGCGGTATGACACCGGGAGCGCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACgatga < 2:417816/235‑1 (MQ=255) aaGGTCTG‑GATTTAGGGCACCCAGTGGCACCG‑AAAACAGTTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTa < 1:1052372/238‑1 (MQ=255) | GCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGC‑TTTGATGTGCCGGAAGGTCTG‑GATTTAGGGCAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTC‑TTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTA > NC_000913/1013786‑1014256 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |