New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1536774	66 (0.710)	3 (0.030)	3/414	NT	3.9%	coding (536/696 nt)	narW	nitrate reductase 2 (NRZ), delta subunit (assembly subunit)
	?	NC_000913	= 1536833	85 (0.950)					coding (477/696 nt)	narW	nitrate reductase 2 (NRZ), delta subunit (assembly subunit)

GCCGAGGAAAAACACCGTCGCACAAATGTACGGGTAGATATCGTAAAAAAAGACGTTCAGATACTGAATCATTTCCCACCTCCCGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCAATCCTTCTTTCGCCTGATCGTCAGGCAGTACGCTTAAATACTCCAGATACAGCGGTAGATAATCGGGCAG  >  NC_000913/1536546‑1537003                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                       gCCGAAGAAAAACCCCGTCGCACAAATGTACGGGTAGATAGCGTAAAAAAAGACGTTCAGATACTGAATCATTTCCCACCTCCCGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCGAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATcgcg                                                                                                                                                                                                                              <  1:1028269/239‑1 (MQ=255)   cggggAAAACCCCCGTCCCCAAAATGTCCGGTTAGATATCGTAAAAAAAGACGTTCAGATACTGAATCATTTCCCACCTCCCGCACTGATGGCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGct                                                                                                                                                                                                                            <  2:977699/236‑1 (MQ=255)         aaaccccccgtccacaAATGTACGGGTAGATTTCGTAAAAAAAGACTTTCAGATACTGAAGCCTGTCCCACCTCCCGCACTTATTGCGAC‑ATATGGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCg                                                                                                                                                                                                                       <  2:869763/226‑1 (MQ=255)                                  gTAGATATCGTAAAAAAAGACGTTCAGATACTGAATCATTTCCCACCTCCCGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGAAATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCCGGGCCTTCGCTGTTTACTTGTTTTGTGCCCCTgc                                                                                                                                                                                              >  1:937905/1‑237 (MQ=255)                                          cGTAAAAAAAGACGTTCAGATACTGAATCATTTCCCACCTCCCGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCCCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGaaa                                                                                                                                                                                     >  1:494122/1‑239 (MQ=255)                                            tAAAAAAAGACGTTCAGATACTGAATCATTTCCCACCTCCCGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATcgcg                                                                                                                                                                                                                              >  1:690499/1‑196 (MQ=255)                                            tAAAAAAAGACGTTCAGATACTGAATCATTTCCCACCTCCCGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATcgcg                                                                                                                                                                                                                              <  2:690499/196‑1 (MQ=255)                                            tAAAAAAAGACGTTCAGATACTGAATCATTTCCCACCTCCCGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTa                                                                                                                                                                                                                >  1:18907/1‑210 (MQ=255)                                            tAAAAAAAGACGTTCAGATACTGAATCATTTCCCACCTCCCGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTa                                                                                                                                                                                                                <  2:18907/210‑1 (MQ=255)                                            tAAAAAAAGACGTTCAGATACTGAATCATTTCCCACCTCCCGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCCCTTCCCTGTTTACTTTTTTTGGGACACTGTCACTTAAAAgg                                                                                                                                                                                   >  2:67064/1‑239 (MQ=255)                                            tAAAAAAAGACGTTCAGATACTGAATCATTTCCCACCTCCCGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGGGTCATCGCCCTCTTCCCTGTTTACTTGTTTTGTTAAACTGTCACTTGAAAgg                                                                                                                                                                                   >  1:456264/1‑239 (MQ=255)                                            tAAAAAAAGACGTTCAGATACTGAATCATTTCCCACCTCCCGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTCAA‑TCAAGCGCCTGGCGGGGGTCCTCGCGCTCTTCCCCGTTTACTTGTTTTTGGACACGGTCCCTTGaaaag                                                                                                                                                                                   >  2:780541/1‑237 (MQ=255)                                                      cgttaagtttccgAATCTTTTCCCCCCTCCCGCACTTATGTCTAC‑ATATTGCGGCGCGACCTCCTGGGTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAAT‑AACTTCCCCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCGGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACGGTCACTTGAAAGGGAGCTTCCCg                                                                                                                                                                         <  2:19781/226‑1 (MQ=255)                                                              tACTGAATCATTTCCCCCCCCCCGCACTGAT‑TCCACTATTTTGCGGCGCGAACTCCTGGTAAAAGCGTCGCTGATATTGATTACGCGGCGAGCTGCCACCCGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTg                                                                                                                                                                  <  2:760126/238‑1 (MQ=255)                                                                  gAATCCTTCCCCCCCCCCCGCCCTGATGCCGAC‑ATATGGCGGCGCGAAATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAACCTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTgcagca                                                                                                                                                             <  1:623718/239‑1 (MQ=255)                                                                  gAATCATTTCCCCCCTCCCGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTgcagca                                                                                                                                                             <  1:751598/239‑1 (MQ=255)                                                                  gAATCATTCCCCCCCTCCCGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTgcagca                                                                                                                                                             <  1:895067/239‑1 (MQ=255)                                                                   aaTCATTTCCCACCTCCCGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCCCACTGCA‑TCCAGCGCCTGGCGGGTGTCATCCCGCTCTTCCCCGTTTTCTTGTTTTTTGGCACTGTCCATTGCAAGGGAGCTTCCCGCCAGTTgcagcaa                                                                                                                                                            >  2:275317/1‑238 (MQ=255)                                                                   aaTCATTTCCCACCTCCCGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCCCTCTTCCCTGTTTACTTGTTTTTTGACACTGTCCCTTGAAAGGGAGCTTCCCCCCCATTgcagcaa                                                                                                                                                            >  2:895067/1‑238 (MQ=255)                                                                                cccccGCACTGATGTCGAC‑ATATTGCGGCCCGACCTCCTGGCTAAAGGTTCGCTGATTTTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCCCCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAaacaac                                                                                                                                               <  1:780541/237‑1 (MQ=255)                                                                                  cccGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCCCTCTTCGCTGTTTACTTGTTTTGTGGCACTGTCACTTTAAAGGGCGCTTCCCGCCAGTTTCAGCAGCGCATCAAACAAcgc                                                                                                                                             >  1:988177/1‑239 (MQ=255)                                                                                   ccGCACTGATGTCGAC‑ATTTTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGACCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAAcgcg                                                                                                                                            <  1:207949/239‑1 (MQ=255)                                                                                   ccGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGCCACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCCAACAAcccg                                                                                                                                            >  1:333689/1‑239 (MQ=255)                                                                                      cACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTTGGACACTGTCACTTTCAAGGGGGCTTCCCGCCAGTTGCAGCCGAGCATCAAAAAAagccga                                                                                                                                          >  2:1052762/1‑235 (MQ=255)                                                                                           aTGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTTGTTTGGGCCCATGTCCCTGTAAAGGGGGGTTCCCACCCGTTTCAGCAGAGCAACAAACAACGCGGAcacggg                                                                                                                                    >  2:499664/1‑234 (MQ=255)                                                                                                      atTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCCGTTGCCGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCgt                                                                                                                          >  1:1050490/1‑239 (MQ=255)                                                                                                        tGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAAAAACCCGGACAACGGTGCCTCCCgttg                                                                                                                        >  1:1080318/1‑239 (MQ=255)                                                                                                                  cccccgggCTAAGGTGTCGCTTTTTTTGATTAAGCGGCGACCTTTCCCCCGCCGTGGCGTTATCTTCAATAAACTTCCCCTGTTCCTCTTCCCACACTGCA‑TAAGGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTGGTTTTGTGACACTGTCACTTGAAAGGGAGCTTcccgccaggcgcttgatgcagtgtgggaagaggaacaggtgaagtttattgaagataacgcca                                                                                                              >  2:1069843‑M2/4‑176 (MQ=255)                                                                                                                  cATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGa                                                                                                              <  1:313498/239‑1 (MQ=255)                                                                                                                       tGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCCCGCGTTGTTTTAAGCGACCG‑cc                                                                                                        >  1:848566/1‑239 (MQ=255)                                                                                                                       gggCTAACGCTTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGGGGGGTTAACTTCAATCAACTTCACCTGTTCCTTTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACCCTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑cc                                                                                                        <  1:1052762/238‑1 (MQ=255)                                                                                                                         gCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAAAGCGTACCACGGGGCCTCGCGTTGTTTTAAGCGACCG‑CCa                                                                                                       >  1:526737/1‑238 (MQ=255)                                                                                                                           tAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTTTCCCACGCCGTGGCTTTATCTCCAATAAACTTCACCTGTTCCTCTTCCCACCCTGCA‑TCAAGCGCCGGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAg                                                                                                     <  1:334957/238‑1 (MQ=255)                                                                                                                              aGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTCCTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCCCGGTGCCCCGCGTGGTTTTAAGCGACAC‑CCaacaagg                                                                                                 >  2:26248/1‑234 (MQ=255)                                                                                                                              aGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAgg                                                                                                 >  1:266596/1‑239 (MQ=255)                                                                                                                                   cGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACCCGTACCACGGTGCCTCGCGTTGTTTT‑AGACACCGCCCAACCAGGGCGAg                                                                                            >  1:379374/1‑239 (MQ=255)                                                                                                                                          atTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCCCGTTGTTTTAAGCAACCG‑CCAAGCAGGGCGAGGATCgg                                                                                      >  1:905480/1‑238 (MQ=255)                                                                                                                                           ttGTTTAACGGGCGAGTTGTCCCCCCCCGGGGCGTTACTTTCAATAACCTTCCCCTTTTCCTCTTCCCCCCCTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGGGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGgcg                                                                                    <  2:266596/239‑1 (MQ=255)                                                                                                                                           ttGCTTAAGCGCCGGGCTGTCACACCCCGGGGCTTTATCTTAAAAAAACTTCCCCTGTTCCTCTTCCCACACTGCA‑TAAAGCGCCTGGCGGGTGGCATCGCGTTTTTCGCTTTTTACTTGTTTTGGGACACTGCCCCTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGgcg                                                                                    <  2:1061449/239‑1 (MQ=255)                                                                                                                                                  aGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCC‑CCCAGCAGGGCGGGGAGCGGCGCAACAtt                                                                             >  2:866081/1‑239 (MQ=255)                                                                                                                                                         aGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCCACATTGAGCaa                                                                       >  1:168477/1‑238 (MQ=255)                                                                                                                                                                   cGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGGTTCCTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCCGGGCATCAAACAACGCGTACCACGGTGCCCCGCGTTGTTTTAAGCGACCG‑CCAACCAGGGCGCGGGTAGGCGCAACATTGAGCAATCCTTCTTTc                                                             >  2:736955/1‑238 (MQ=255)                                                                                                                                                                        tGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGaagctccctttcaagtgacagtgtcacaaaaccagtaaacagcgaagagcgcgatgacacccgccaggcgccttatgcagtgtgggaagaggaacaggggaagtttattgaagataacgccacggcgggggaaaggtcgccgcttaatcaaaaaaagcgacaccttagcccggggg                                                        >  2:1069843‑M1/1‑63 (MQ=255)                                                                                                                                                                        tGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACGG‑CCACGCAGAGCGAGGATCGGCGCAACATTGAGCAATCCTTCTTTTGCCTGa                                                       >  1:303315/1‑239 (MQ=255)                                                                                                                                                                        tGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCCAGCCCGGCGAGAATCGGCGCAACAttaggacaacctcacttcgcccg                                                        >  1:1010066/1‑217 (MQ=255)                                                                                                                                                                        tGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCC‑CCAAGCAGGGCGAGGATCGGCGCAAAATTGAGCAATCCTTCTTTCGCCTg                                                        >  1:998818/1‑238 (MQ=255)                                                                                                                                                                        tGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCCCGCGTTGGTTTAAGCGACCG‑CCAAGCAGGGCGGGGATCGGCGCCACATTGACCAATGCTTCTTTCGccgg                                                        >  2:838646/1‑236 (MQ=255)                                                                                                                                                                               aTCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGGGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAACCAGGGCGAGGATCGCCGCAACCTTGGGAAATCCTTCTTTCGccggctctccag                                                >  2:1025051/1‑229 (MQ=255)                                                                                                                                                                                  ttCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGaagctccctttcaagtgacagtgtcacaaaacaagtaaacagcgaagag                                                                                                                                                                                       >  2:249587‑M1/1‑53 (MQ=255)                                                                                                                                                                                  ttCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGaagctccctttcaagtgacagtgtcacaaaacaagtaaacagcgaagag                                                                                                                                                                                       <  1:249587‑M1/102‑50 (MQ=255)                                                                                                                                                                                     aaaaaaCTTCACCTGTTCCCTTTCCCCACCGGCA‑TCAAGCGCCTGGCGGGTTTCATCGCGCTCTTCGCTGTTTCCTTGTTTTGTGACCCTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCAATCCTTCTTTCGCCTGATCGTCAGGCAGTa                                          <  1:67064/236‑1 (MQ=255)                                                                                                                                                                                     aaTAAACTTCCCCTTTTCCTCTTCCCACCCTGCA‑TCAAGCCCCTGGCGGGTGTCAACGCGCTTTTCGCTGTTTACTTGTTTTGGGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCAATCCTTCTTTCGCCTGATCGTCAGGCAGTa                                          <  1:780088/239‑1 (MQ=255)                                                                                                                                                                                     aaTAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGGTTTAAGCGACCG‑CCAAGCCGGGCGCGGACTGGCGCAACATTGAGCAAACCCTCTTTCCCCTCATCggccgccagc                                           >  2:479199/1‑229 (MQ=255)                                                                                                                                                                                     aaTAAACTCCCCCTGTCCCTTTCCCCACACTGCA‑TCAAGCGCCGGGCGGGTGTCATCGCGCTCTTCGCTTTTTACTTGTTTTGGGACACTGCCCCTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAGACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCAATCCTTCTTTCGCCTGATCGTCAGGCAGTa                                          <  1:275317/239‑1 (MQ=255)                                                                                                                                                                                            ttCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCAATCCTTCTTTCGCCTGATCGTCAGGCAGTACGCTTaa                                   >  1:3044/1‑239 (MQ=255)                                                                                                                                                                                              ccccTTTTCCTCTTCCC‑CCCTGGACGCACGCGCCTGGCGGGTGTCATCGCGCTTTTCGGTTTTTTCTTTTTTGGTGACACTGTCATTGGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCAATCCTTCTTTCGCCTGATCGTCAGGCAGTACGCTTAAAt                                 <  2:1050490/237‑1 (MQ=255)                                                                                                                                                                                               aCCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGACCGGCGCAACATTGGGCAATCCTTCTTTCCCCTAATCGCCAGGCAGGACGCTTaaaa                                 >  2:584390/1‑237 (MQ=255)                                                                                                                                                                                                      cccttccccccccgccA‑TCAAGCGCCTGGCGGGTGTCATCGGCCTCTTCGTTGTTTACTTGTTTTGGGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCAATCCTTCTTTCGCCTGATCGTCAGGCAGTACGCTTAAATACTCCAGa                         <  2:905480/224‑1 (MQ=255)                                                                                                                                                                                                        tctTCCCACACTGCA‑TAAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCAATCCTTCTTTCGCCTGATCGTCAGGCAGTACGCTTAAATACTCCAGATa                       <  1:866081/239‑1 (MQ=255)                                                                                                                                                                                                           tCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCAATCCTTCTTTCGCCTGATCGTCAGGCATTACGCTTAAATACTCCAGATACa                     >  1:206741/1‑238 (MQ=255)                                                                                                                                                                                                                 acTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCCATCCTTCTTTCGCCTGATCGTCAGGCAGTACGCTTAAATACTCCAGATACCGCGGTAg              >  1:395488/1‑239 (MQ=255)                                                                                                                                                                                                                    gCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACGCTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCAATc                                                                     >  1:1030213/1‑181 (MQ=255)                                                                                                                                                                                                                    gCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTGAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCAATCCTTCTTTCGCCTGATCGCCAGGCAGTACCCTTAAATAACCCAAATAAAGCGGTaaaaa           >  2:884409/1‑235 (MQ=255)                                                                                                                                                                                                                    gCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTAACACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCCAGCAGGGCGAGGATCGGCGCAACATTGAGCAATCCTTCTTTCGCCTGATCGTAAGGCGGTACCTTTAAAAACTCCAGAAACAGCgtagaaga           >  2:59558/1‑232 (MQ=255)                                                                                                                                                                                                                    gCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTGGTGACCCTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCAATc                                                                     <  2:1030213/181‑1 (MQ=255)                                                                                                                                                                                                                          ctgcaacTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACCCGTACCACGGGGCCTCGCGGTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGAGCAACATTTGGCAATCCTTCTTTCGCCTGATCGTCAGGCAGTACGCTTAAATACTCCCGTTACAGCGCTAGATAATCgg      >  1:519680/7‑239 (MQ=255)                                                                                                                                                                                                                           aGCGCCTGGCGGGTGTCATCGCGCTCTGCGCTGTTTCCTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCAATCCTTCTTTCGCCTGATCGTCAGGCAGTACGCTTAAATACTCCAGATACAGCGGTAGATAATCggg     <  1:289777/239‑1 (MQ=255)                                                                                                                                                                                                                              gcCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCAATCCTTCTTTCGCCTGATCGTCAGGCAGTACGCTTAAATACTCCAGATACAGCGGGAAAAAATGGGGCAg  >  2:886943/1‑239 (MQ=255)                                                                                                                                                                                                                                cTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCAATc                                                                     <  1:919514/170‑1 (MQ=255)                                                                                                                                                                                                                                cTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCAATc                                                                     >  2:919514/1‑170 (MQ=255)                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                       GCCGAGGAAAAACACCGTCGCACAAATGTACGGGTAGATATCGTAAAAAAAGACGTTCAGATACTGAATCATTTCCCACCTCCCGCACTGATGTCGAC‑ATATTGCGGCGCGACATCCTGGCTAAAGCGTCGCTGATATTGATTAAGCGGCGAGCTGTCACACGCCGTGGCGTTATCTTCAATAAACTTCACCTGTTCCTCTTCCCACACTGCA‑TCAAGCGCCTGGCGGGTGTCATCGCGCTCTTCGCTGTTTACTTGTTTTGTGACACTGTCACTTGAAAGGGAGCTTCCCGCCAGTTGCAGCAGAGCATCAAACAACGCGTACCACGGTGCCTCGCGTTGTTTTAAGCGACCG‑CCAAGCAGGGCGAGGATCGGCGCAACATTGAGCAATCCTTCTTTCGCCTGATCGTCAGGCAGTACGCTTAAATACTCCAGATACAGCGGTAGATAATCGGGCAG  >  NC_000913/1536546‑1537003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.