Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 2,093,736 | T→G | 21.0% | V90G (GTG→GGG) | hisB → | histidinol‑phosphatase and imidazoleglycerol‑phosphate dehydratase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,093,736 | 0 | T | G | 21.0% | 134.3 / 4.6 | 75 | V90G (GTG→GGG) | hisB | histidinol‑phosphatase and imidazoleglycerol‑phosphate dehydratase |
Reads supporting (aligned to +/- strand): ref base T (39/16); new base G (10/7); total (52/23) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.83e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CCCTGATTAGCGAACCGCCGAGTGATTTTCAGGTGGACCGTTTTGATAAACTCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCTACGACCGCGAAACCCTGAACTGGCCAATGATTGGCGAGCAACTCACCAGACGTGACCGTTACGCT > NC_000913/2093505‑2093974 | cccTGATTAGCGACCGGGCGAGTGATGTGCAGGTGGACCGTTTTGATAAACGCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGAt < 1:386632/238‑1 (MQ=255) aTTAGCGAACCGCCGAGTGATTTTCAGGTGGACCGTTTTGATAAACTCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCCCAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACCGTTTGATTAAGGGCTGATTTGTc > 1:899924/1‑238 (MQ=255) aTTAGCGAACCGCCGAGTGATTTTCAGGTGGACCGTTTTGATAAACTCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCCCAACCTG‑ATGATGCAGATCTTCACCTCCCAA‑GGCGTACAGTTTGATTAAGGGCTGATTTTTc > 1:890641/1‑238 (MQ=255) aTTAGCGAACCGCCGAGTGATTTTCAGGTGGACCGTTTTGATAAACTCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGCGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGACCTTCACCTCGCAA‑GGCGTACAGTTTGCAGAACTGCTGATTTGTcc > 1:704564/1‑239 (MQ=255) ttgccgaccccgcgggtgtTTTTCAGGTGGACCGTTTGGATAAACTCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCg < 2:385404/224‑1 (MQ=255) cGAACCGCCGAGTGATTTTCAGGTGGACCGTTTTGATAAACTCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCCCAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGGGCTGATTTTGCCGccc > 2:258114/1‑236 (MQ=255) cGAACCGCCGAGTGATTTTCAGGTGGACCGTTTTGATAAACTCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGCTTCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGGGCTGATTTGTCCGCAc > 1:1038548/1‑238 (MQ=255) aaCCGCCGAGTGATTTTCAGGTGGACCGTTTTGATAAACTCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGACTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGGGCGGATTTGTCCGCGccc > 1:126556/1‑237 (MQ=255) cgccgAGTGATTTTCAGGTGGACCGTTTTGATAAACTCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCCCA‑GGCGGATTTCGATGGCCCGCCCACCCTG‑ATGTTGCAGATCTTCACCTCGCAA‑GGCTTACAGTTTGATGAAGGGCTGGTTTGTCCGCACCTGcc > 1:151797/1‑238 (MQ=255) cgccgAGTGATTTTCAGGTGGACCGTTTTGATAAACTCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGATGATTTTTCCGCACCTGcc > 1:927401/1‑238 (MQ=255) cgccgAGTGATTTTCAGGTGGACCGTTTTGATAAACTCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCCCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGAGCTGATTTGTCCGCACCTGcc > 1:754464/1‑238 (MQ=255) ttttCAGGTGGACCGTTTTGATAAACTCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGt > 1:796380/1‑239 (MQ=255) ggggtggccttttttGAAAACCCCG‑CTTTGAACCCGGGGGTGACCCCGGAATGGCAGAA‑GCGACAAAAAGGGGGC‑TAAAAGCTGGGGATGATCACTAATGAGGTGGGTCTGGGAAAAAAAAGTTTCCCACA‑GGCGGATTTCGAGGGCCCGCACAACCTG‑ATGATGAAGATCTCCACCCCGCAA‑GGCGTACAGTTTGATGAAGTGCTGTTTTGTCCGCACCGGCCCGCCGATGAGTGCGa < 2:880110/228‑1 (MQ=255) gACCGTTTTGATAAACTCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGGGCTGATTTGTCCGCACCTGCCCCCCGATGAGGGCGACTGCCg > 2:810774/1‑239 (MQ=255) ttttGATAAACTCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAg > 1:328238/1‑238 (MQ=255) aaCTCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCCCAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACCGTTTGCTGAAGGGCGGATTTGTCCCCCCCCGCCCCCCGAGTAGGGGGACTGCCGAAACCCGaaaaaa > 2:950137/1‑236 (MQ=255) cTCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCCCAA‑GGCGTAACGGTTGATGAAGTGCTGATTTGTCCGCCCCTGCCCGCCGCTGAGGGCGACTGCAGGAAACCGaaaagaaa > 2:602954/1‑234 (MQ=255) cTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACtgg > 1:603309/1‑239 (MQ=255) ccccggggttgttccGGAAATGGTGAAGGCTGAAAAAGGCGGTC‑TACAAGCGGGGGATGACACCTAAGCAGTATGGTCTGGAAACACAAGTTTCCCCACG‑GGCGGATTTCGATGGCCCGCACACCCTG‑AGGAGGCAGCTCTTCCCCTCGAAA‑GGGGTACATTTTGATGAAGTGCTGTTTTCCCCGCCCCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGaa < 2:1038548/226‑1 (MQ=255) cccGGGCGTAACCCCGGAACTGCGAAA‑GCTGAAAAAGGCGGGT‑AAAAAGCTGGTAATGATCATTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACG‑GGCGGATTCCGATGGCCCGCACACCCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGaa < 1:357124/237‑1 (MQ=255) acgggggGTGACCCGGGACGTGCTGAA‑GC‑GGAAAAAGGGGGCAGAAGAGCGGGTGATGACCAATAAGCGGGATGGTCTTGAAACAAAAATTTCCCCAAA‑GGCGAATTCGGATGGCCGGCACACCGTG‑ATGATGCAGATCTTC‑CCCGGCAAGGGGGTACAGTTTGATGAAGGGCTGTTTTGTCCGCCCCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGaa < 2:867741/235‑1 (MQ=255) ggCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGCTTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTa > 1:377543/1‑239 (MQ=255) ggCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTa > 1:927538/1‑239 (MQ=255) ggCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCCCTGAGTGCGACTGCCGTAAGCCCAAAGAaaaaacggggggaagtta > 2:299228/1‑225 (MQ=255) ggCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGACTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGCTGAAGGGCTGATTTGTCCGCACCTGACCGCCGCTGAGTGCGACGGCCGTAAGCCGAAAGGAAAACTGGTGGAAcagta > 1:519446/1‑235 (MQ=255) gATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTg > 1:292547/1‑238 (MQ=255) gaaccggctgacggcgaaaaaaGGGGGC‑TAAAAGTTGGGTATGCCCACTAAGAGGGAGGGCCTGGGAACAAAAAGTTCCCCACG‑GGCGGATTCGGATGCCCCGCACAACTGG‑AGGATGCAGATCTTCCCCCCGAAG‑GGCGTACATTTGAAGGAAGTGTGGTTTTGCCCCCCCCGCCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGc < 2:899924/222‑1 (MQ=255) ctgAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑CTGATGCAGATCTTCCCCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGCTCAGTGCGACTGCCGTAAGCCGAAAGCAAAACTGGGGGAACGTTATCTGGCGGAGCAAACgca > 2:382430/1‑237 (MQ=255) gCTGCAAAAAGCGGGT‑TAAAAGCGGGGTATGATCACTAATCAGGATGGTCTGGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCGCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCCCCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGAt < 1:950137/238‑1 (MQ=255) cAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGCGGAACGTTATCTGGCCGAGCAAGCGATGGGTcgc > 1:583886/1‑237 (MQ=255) aaaGCGGGC‑TAAAAGCGGGTGGTGAACAATAACCAGGATGGTCTTGAAACAAAAAGTTCCCCAAG‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTaa < 1:382430/239‑1 (MQ=255) taaaaagacaagaaGGTGGTGATGATCAATAAGCAGGATGGTCTTGGAACAAAAAGTTCCCCACA‑GGCGGATTGCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTaa < 1:740663/227‑1 (MQ=255) agacagttaaaaGTTGTTGATGATCACTAACCGGGGT‑GTCTTGGAAAAAAAAGTTTTCCACAGGGCGGATTGCGTGGGCCCGCAAACCGGG‑ATGTGGAAGTTCTTCCCCCCGAAG‑GGCGTACGTTTGGATGAAGTGCTGATTTGCCCGCCCCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTaa < 2:196591/227‑1 (MQ=255) ggTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGGAAAACTGGTGGAACGTTATCTGGCTGAGCCAGGCAGGGAACCGGCCAAAAGTTAtggtgatgggg > 2:522222/1‑230 (MQ=255) gTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGGGCGGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGGAAAACTGTGGGAACCGTTCCTGGCTGGGAAGGGGGGGGAAGGGCCTAACACTTTAGTGATTGGCg > 2:914027/1‑238 (MQ=255) tgatgaTCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTAtgtg > 1:196591/1‑230 (MQ=255) gatCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGGGGAACGTTATCTGGCTGAGCAAGCGATGGAACCGGCTAACAGTTAttgg > 2:740663/1‑223 (MQ=255) atCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATcgcgc > 1:17217/1‑239 (MQ=255) cTAATCAGGATGGTCTTGGCACACAACGTTTCACACA‑GGCGGATTTAGATGGCCCGCGCCACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGGCAGCCGAAAGAAAAACTGGCGGGCGGTTATCTGCCTGCGCAAACGATGGCGCGCGCTCACGATTATGAGATTGGGGATcgcgcaccc > 2:120718/1‑235 (MQ=255) aTCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTAGTGGATTGGCGATGCGGcgaccgac > 1:1033833/1‑239 (MQ=255) gtttttgaaaacaaaaTTTTCCCCCG‑GGCGTTTTCCGATGCCCCAC‑CAACCCGTATGTTGCATGTTTCCCCCCCGCAA‑GGCTTACAGTTTGATGAAGTGCGAATTTGCCCGCCCCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAAc < 2:867300/225‑1 (MQ=255) tCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGGAAAACTGGGGGAACGTTATCTGGCTGAGCAAGGGAAGGATCGCGCTACAAGTATTGTGTTTGGGGATCGCGCGACCGAAATTCAACTgg > 2:792285/1‑239 (MQ=255) cTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑GTGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCCCCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGGGGAACGTCTTATGGCTGAGAACGCGGTGGACCGCGCAAACCGCTATTGGATTGGGGTACCGGcgaccgaacatcacctgcg > 2:638537/1‑227 (MQ=255) ttGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGGGATTGGCGATCGCGCGACCGACATTCAACTGGCg > 1:518261/1‑239 (MQ=255) ttGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGCGGAACGTTATCTGGCTGGGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGCCATTCAACTGGCg > 1:608361/1‑239 (MQ=255) ttGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGAACAGTTTGATGAAGTGCTGATTTGTCCGCACCCGCCCGCCGCTGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGGGGAACGTTATCTGGCTGAGCAAGCGATGGAACGCGCTAAACGTTATGGGATTGGAGATCCCGCGACCGACATTAAACAgggg > 2:182927/1‑237 (MQ=255) gAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTg > 1:61212/1‑92 (MQ=255) gAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTg < 2:61212/92‑1 (MQ=255) acaAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGaaaa > 1:867300/1‑237 (MQ=255) cagaGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGGGGTTGGGGGACGCGCCACCGCAATTAAACGGGGGGaaaaaag > 2:913915/4‑236 (MQ=255) caAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAC‑GGCGTACAGTTTGATGAAAAGCTGATTTGTCCGCCCCTGCCCGCCGATTAGTGCGCATGCCGGAAGACGAAAGTAAAACTGGTGGAACGTTAGCTGGCGGAGCAAGCGATGGAACGCGCTAACGGTTAAGTGCTTAGCGATCGCGCGGCCCACAACCAAATCGCGGGAAACAt > 2:130162/1‑239 (MQ=255) caAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACa > 1:1038866/1‑190 (MQ=255) caAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGGGGAACGTTATCTGGCTGAGCACGCGATGGAACCGCCAAACAATTATGGGATTGGGGTTGGCGGGGCCGCAATTCAAATGGCGGGAAAAAt > 2:740481/1‑239 (MQ=255) cccAGA‑GGCGGTTTCGGATGGCCCCAAAAACCTG‑TTGATGAAAATCTTCACCCCGAAA‑GGCGTACATTTGGATGAAGTGCTGATTTGCCCGCCCCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTa < 1:258114/239‑1 (MQ=255) cccACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTcttgctcttatacacatctccgag > 1:717773/1‑215 (MQ=255) cccACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGAAGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGCAAAACATGGGCAtt > 1:864551/1‑238 (MQ=255) ca‑GGCGGTTTTCGATGGCCCGCACAGCCTG‑ATTGTGCAGATCCTCCCCTCGCAA‑GGCGTACAGTTTGATGAATTTCTGATTTTCCCGCCCCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTgg < 1:330176/239‑1 (MQ=255) gggggttttGGAGGGCCCGCCAAACCTG‑ATGAGGCAGCTCTTCACCTCGAAA‑GGCGTACATTTTGATGAAGGGCTGTTTTGTCCGCACCGGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGtt < 1:336096/233‑1 (MQ=255) gCGGATTTCGATGGCACCCCCAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTAGAGTTTGGTGAAGCGCTTGATTGTCCTCCACTGCCCGCCGCTGAGTGCGACTGCCGTAGGCCGAAAGTCAAACTGGGGGGAAGTTATCTGGTCGAGCAAGCGAAGGATCGCGTTACATGTTATGCAGTGGGCGACCGCGGGCCCGCCGTACAACAGGCGGGACACATgggactaacggataa > 2:267951/1‑227 (MQ=255) gcccgacaacccTG‑GTGATGAAGTCTTTCCCCGCGCAG‑GGCGTCCGGTTTGATGAAGTGTTGTTTTGTCCGCACTGGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCt < 2:61078/148‑1 (MQ=255) cccGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGGGCGACCGACATTCAACCTGCGGAAAACAAGGGCATTCCGGGTTTACGccagaccccca > 2:400433/1‑229 (MQ=255) ctccacaCCCTG‑ATGATGCAGATCTTCCCCTGGCAG‑GGGGTCGTGTTGGATGAAGGTCTGTTTTGTCCGCCCCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCTACGACcgcg < 1:400433/235‑1 (MQ=255) cggaacaACCGG‑AGGAGGCAGATCTTCACCCGGAAA‑GGCGTACAGTTTGATGAAGGGCTAATTGGCCCGCACCTGACCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCTACGACcgcg < 1:947396/234‑1 (MQ=255) ccgccaaacttgatgtgcaaGATTTTCACCCCGCAG‑GGCTTCAAGTTTGATGAATGGCTGATTTGCCCGCACCGGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCTACGACcgcg < 1:702412/219‑1 (MQ=255) ccTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTAtg > 1:61078/1‑158 (MQ=255) gtg‑atgaGGAATATCTTCCACTCGCAG‑GGGGTTAAGTTGGAGTAGGGGGTGATTTGCCCGAACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCTACGACCGCGAAACCCTGaa < 1:522222/238‑1 (MQ=255) cAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCTACGACCGCGAAACCCTGACCTGGCCAAt > 1:109041/1‑239 (MQ=255) cAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCTACGACCGCGAAACCCTGAACTGGCCAAt > 1:1008830/1‑239 (MQ=255) cTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACGGGTTTACGCCACGACCCCGAAACCCTGAACGGGCCAATAATTg > 2:854947/1‑239 (MQ=255) cGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCTACGACCGCGAAACCCTGAACTGGCCAATGATTGGCGACCa > 1:531058/1‑238 (MQ=255) cGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGCCGATCGGGCGACGGACATTCAACTGGCGGAAAACATGGGCCTTACTGGTTTACGCTACGACCGCGAAACCCTGACCTGGCCAATGATggggcgtaac > 2:621668/1‑232 (MQ=255) cgcggggtctACTGTTTGATGGTGGGTTGTTTGGCCCGCCCCTGCCCGCCGATGAGGGCGACTGCCGTAACCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCTACGACCGCGAAACCCTGAACTGGCCAATGATTGGCGAGCaa < 2:183308/230‑1 (MQ=255) ccaagggCGTACGTTTGGATGAAGTTCTGATTTGCCCGCCCCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCTACGACCGCGAAACCCTGAACTGGCCAATGATTGGCGAGCaa < 1:257019/234‑1 (MQ=255) cAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCTACGACCGCGAAACCCTGAACTGGCCAATAATTGGCGGACAAcc > 2:257019/1‑238 (MQ=255) tgatgaAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCTACGACCCCGAAACCCTGAACTGCCCAATGATTGGGGAGAAAACCACCAGACGTGccc > 2:799919/1‑239 (MQ=255) tGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCTACGACCGCGAAACCCTGAACTGGCCAATGATTGGGGGGCAACTCACCAGACGGGACCGTTaaccc > 2:865198/1‑235 (MQ=255) tGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCCACGACCGCGAAACCCTGAACTGGCCAATGATTGGGGCGCAACTACCCAGACGGAACCGTTACGc > 2:737814/1‑238 (MQ=255) | CCCTGATTAGCGAACCGCCGAGTGATTTTCAGGTGGACCGTTTTGATAAACTCGCCTTTGAA‑CCGGGCGTGATCCCGGAACTGCTGAA‑GCTGCAAAAAGCGGGC‑TACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACA‑GGCGGATTTCGATGGCCCGCACAACCTG‑ATGATGCAGATCTTCACCTCGCAA‑GGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCTACGACCGCGAAACCCTGAACTGGCCAATGATTGGCGAGCAACTCACCAGACGTGACCGTTACGCT > NC_000913/2093505‑2093974 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |