| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4426416 | 77 (1.120) | 4 (0.060) | 4/272 | 9.5 | 4.9% | coding (308/450 nt) | rplI | 50S ribosomal subunit protein L9 |
| ? | NC_000913 | = 4426511 | 83 (1.260) | coding (403/450 nt) | rplI | 50S ribosomal subunit protein L9 | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGGAAGCTAAACTGGCTGAAGTTCTGGCAGCTGCTAATGCTCGCGCTGAGAAAATCAATGCACTGGAAACTGTTACCATCGCGTCTAAAGCTGGCGACGAAGGTAAACTGTTCGGTTCCATCGGTACTCGCGACATCGCTGACGCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4426269‑4426416‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgtGAACCTGGAAGCTCACTTCGTGTTCGCCAGTGGTACGCAGAACGCCGTTCGGCAGACGAACTTCGCTCTTAGCCACTTCAACGCCAGCTGCAGTTACAGCGTCAGCGATGTCGCGAGTACCGATGGAACCGAACAGTTTACC < NC_000913/4426511‑4426370 TGGAAGCTAAACTGGCTGAAGTTCTGGCAGCTGCTAATGCTCGCGCTGAGAAAATCAATGCACTGGAAACTGTTACCATCGCGTCTAAAGCTGGCGACGAAGGTAAACTGTTCGGTTCCATCGGTACTCGCGACCTCGCTGAC > 2:905120/1‑143TGGAAGCTAAACTGGCTGAAGTTCTGGCAGCTGCTAATGCTCGCGCTGAGAAAATCAATGCACTGGAAACTGTTACCATCGCGTCTAAAGCTGGCGACGAAGGTAAACTGTTCGGTTCCATCGGTACTCGCGACATCGCTGAC < 2:648735/143‑1 GGAAGCTAAACTGGCTGAAGTTCTGGCAGCTGCTAATGCTCGCGCTGAGAAAATCAATGCACTGGAAACTGTTACCATCGCGTCTAAAGCTGGCGACGAAGGTAAACTGTTCGGTTCCATCGGTACTCGCGACATCGCTGACG > 1:830702/1‑143 GAAGCTAAACTGGCTGAAGTTCTGGCAGCTGCTAATGCTCGCGCTGAGAAAATCAATGCACTGGAAACTGTTACCATCGCGTCTAAAGCTGGCGACGAAGGTAAACTGTTCGGTTCCATCGGTACTCGCGACATCGCTGACGC > 1:111934/1‑143 GCTAAACTGGCTGAAGTTCTGGCAGCTGCTAATGCTCGCGCTGAGAAAATCCATGCACTGGAAACTGTTACCATCGCGTCTAAAGCTGGCGACGAAGGTAAACTGTTCGGTTCCATCGGTACTCGCGACATCGCTGACGCTGT < 1:801753/143‑1 AAACTGGCTGAAGTTCTGGCAGCTGCTAATGCTCGCGCTGAGAAAATCAATGCACTGGAAACTGTTACCATCGCGTCTAAAGCTGGCGACGAAGGTAAACTGTTCGGTTCCGTCGGTACGCGCGGCATGGCGGAGGCTGTGAc > 2:878432/1‑142 CTGAAGTTCTGGCAGCTGCTAATGCTCGCGCTGAGAAAATCAATGCACTGGAAACTGTTACCCTCGCGTCTCAAGCTGGCGACGAAGGTAAACTCTTCGGTGCCCTCTGTACTCCCGCCATCGCGGACCCTCTGActgccgcc > 2:507142/1‑135 AATCAATGCACTGGAAACTGTTACCATCGCGTCTAAAGCTGGCGACGAAGGTAAACTGTTCGGTTCCATCGGTACTCGCGACATCGCTGACGCTGTGAACCTGGAAGCTCACTTCGTGTTCGCCAGTGGTACGCAGAACCCCG > 2:972875/1‑143 GGTAAACTGTTCGGTTCCATCGGTACTCGCGACATCGCTGACGCTGTGAACCTGGAAGCTCACTTCGTGTTCGCCAGTGGTACGCAGAACGCCGTTCGGCAGACGAACTCCGCTCTTAGCCACTTCAACGCCAGCTGCAGTTA < 1:972875/143‑1 ttgGCTGTGAACCTGGAAGCTCACTTCGTGTTCGCCAGGGGTACGCAGAACGCCGTTCGGCAGACGAACTTCGCTCTTAGCCACTTCAACGCCAGCTGCAGTTACAGCGTCAGCGATGTCGCGAGTACCGATGGAACCGAACA < 1:418937/140‑1 TGTGAACCTGGAAGCTCACTCCGTGTTCGCCAGTGGTACGCAGAACGCCGTGCGGCAGACGAACTTCGCTCTTAGCCACTTCAACGCCAGCTGCAGTTACAGCGTCAGCGATGTCGCGAGTACCGATGGAACCGAACAGTTTA < 2:669172/143‑1 TGAACCTGGAAGCTCACTTCGTGTTCGCCAGTGGTACGCAGAACGCCGTTCGGCAGACGAACTTCGCTCTTAGCCACTTCAACGCCAGCTGCAGTTACAGCGTCAGCGATGTCGCGAGTACCGATGGAACCGAAAAGTTAACC > 2:777579/1‑143 TGGAAGCTAAACTGGCTGAAGTTCTGGCAGCTGCTAATGCTCGCGCTGAGAAAATCAATGCACTGGAAACTGTTACCATCGCGTCTAAAGCTGGCGACGAAGGTAAACTGTTCGGTTCCATCGGTACTCGCGACATCGCTGACGCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4426269‑4426416‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgtGAACCTGGAAGCTCACTTCGTGTTCGCCAGTGGTACGCAGAACGCCGTTCGGCAGACGAACTTCGCTCTTAGCCACTTCAACGCCAGCTGCAGTTACAGCGTCAGCGATGTCGCGAGTACCGATGGAACCGAACAGTTTACC < NC_000913/4426511‑4426370 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |