New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2288917 =	NA (NA)	87 (1.260)	64/284	0.0	100%	intergenic (‑5/+146)	yejO/insH1	pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system/IS5 transposase and trans‑activator
	?	NC_000913	= 4049893	0 (0.000)					intergenic (+142/‑5)	polA/spf	5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease/Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent

TTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATC  >  NC_000913/2288776‑2289054                                                                                                                                              |                                                                                                                                          ttttATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCCATGCTATGGGTGAATATaagg                                                                                                                                          >  2:578583/1‑143 (MQ=255)    tataTGCTGTTCTCCGCCAGGATTGATTTTCGTTTTATTGGCGGGCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATaaggaag                                                                                                                                       <  2:473395/143‑1 (MQ=255)       atGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAAACGTCTCATCTTACTTAACAGTTGATGCCAAAGCTCTGGGTGAATATGAGGAAAGTg                                                                                                                                    >  2:473207/1‑143 (MQ=255)       atGCTGTTCTCCGCCAGGATTGATTTTCGTATAATTGCCGGTCACATAAACTAGCTGGGTATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAGTGCTATGGGGGAATATAAGGAAGGTg                                                                                                                                    >  1:820931/1‑143 (MQ=255)        tGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTACGGGGGAATCGAAGGAAGGTGc                                                                                                                                   >  2:665468/1‑143 (MQ=255)               ctcCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAg                                                                                                                            >  2:509044/1‑143 (MQ=255)                 ccgccgGGATTGATTTTCGTATTATTGGCCGTCCCATAAGCCAGCTGGATATCTTTTTCCAGGACAACGCCATCATCTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCg                                                                                                                          <  2:504276/143‑1 (MQ=255)                  ctccAGGATTTATTTTCGTATTATTGACGTTCCCATAAACCAGCCGCTTATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCgg                                                                                                                         <  2:741617/141‑1 (MQ=255)                   gCCAGGATTGTTTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCggg                                                                                                                        <  2:382733/143‑1 (MQ=255)                   gCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAATGAAGGTGCGAATAAGCggg                                                                                                                        >  1:918301/1‑143 (MQ=255)                   gCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCggg                                                                                                                        <  1:1012051/143‑1 (MQ=255)                   gCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCggg                                                                                                                        >  1:911654/1‑143 (MQ=255)                   gCCAGGATTGATTTTCGTATTATTGGCGGTCACATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCGATGGGCGAATATAAGGCAGGTGCGAATCAGCgga                                                                                                                        >  2:552964/1‑142 (MQ=255)                     cAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCACCTGTCTCACCATACTCAACAGTCGATGCCACTGCTACGGGTGAATAAACGGAATGTGCGAATAACCGGGGa                                                                                                                      >  2:186633/1‑143 (MQ=255)                         attgattTTCGTATTATTGGCGGTCCCCTATACCAGCTGGATATCTTTTTCCAGGACAACACCATCGACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAAtt                                                                                                                  <  1:1129468/143‑1 (MQ=255)                         attgattTTCGTATTATTGGCGGTCCACAATATCACTTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAAtt                                                                                                                  <  1:928068/143‑1 (MQ=255)                              ttttCGGACTATTGGCGGGCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACACAACAGTTGATGCCAATGCTATGGGGGAATACAAGGAAGGTGCGAATAAGCGGGGAAATtcttct                                                                                                             <  1:1139242/143‑1 (MQ=255)                              atgtCGTATTATTGGCGGTCCCATCACCCACCTGGATATCACTTCCCAGGACAACACCATCAACTGCCGCACCACACTCAACAGCTGATGCCAATGCGATGGGTGAATATAAGTAAGGTGCGAATAAGCGGGGAAATtcttct                                                                                                             <  1:500240/140‑1 (MQ=255)                                    tattatTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTg                                                                                                       >  1:470169/1‑143 (MQ=255)                                    tattatTGGCGGTCCCATAAACAAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGCATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTg                                                                                                       >  1:890066/1‑143 (MQ=255)                                      ttattGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAc                                                                                                     >  1:125202/1‑143 (MQ=255)                                      ctattGGCGGTCCCATACACCAGCGGGATATCTTTCTGCAGGACAACACGAGCAACTGTCTCACCATACTCGAGAGTTGATGCCAATGCTATGGGTGAAGATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAc                                                                                                     <  2:1088811/142‑1 (MQ=37)                                       taacgactgTCCCACAAACCAGCTGGATATCTTTTTCCAGGACAACACCCTCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACt                                                                                                    <  1:380009/135‑1 (MQ=255)                                         ttGTCGGTCCCATATACCAGCTGGATATCTTTTTCCAGGTCAACACCATCACCTGTCTCACCATACTCCACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCa                                                                                                  <  2:64334/143‑1 (MQ=38)                                              ggTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcat                                                                                             <  2:557112/143‑1 (MQ=255)                                                    aTAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttcatt                                                                                       >  1:842921/1‑143 (MQ=255)                                                    aTAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttcatt                                                                                       >  1:801487/1‑143 (MQ=255)                                                    aTAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATCCCAATGCTATGGGTGACTATAAGGAACGTGCGAATCAGCCGGCAAATTCTTCCCGGCCGACTCCGtcatttcctc                                                                                       >  2:333049/1‑140 (MQ=255)                                                    aTAAACCAGCTCTACATCTTCTTCCAGGACAACACCATCAACTGTCTCACCATACTCCCCACTAGGTGCCACTGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttcatt                                                                                       <  1:611330/143‑1 (MQ=25)                                                     tAACCCAGCTGGAGATCTTTTTCCGTGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTGTGGGTGAATATAATGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTcatttcattt                                                                                      <  2:504163/143‑1 (MQ=37)                                                        aCCAGCCGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATttctt                                                                                   <  1:174855/143‑1 (MQ=255)                                                             cgggATCTCGTTTTGCAGGACAACTCCAGTGACTGTCTCACCATACTGAACAGTTGATGCCAATGCTACGGGTGATTATAAGGAAGGTGCGAATTAGCGGTGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGt                                                                              <  2:91936/141‑1 (MQ=21)                                                                gATATCTTGTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTg                                                                           <  2:1065978/143‑1 (MQ=255)                                                                 atatCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGa                                                                          <  1:509044/143‑1 (MQ=255)                                                                 atatCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCGATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGa                                                                          <  1:500385/143‑1 (MQ=255)                                                                  tatCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAATGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAg                                                                         >  1:607044/1‑143 (MQ=255)                                                                  tatCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAg                                                                         >  1:102030/1‑143 (MQ=255)                                                                  tagcTTTGTCCACGACAACTCCATCAACTGTCTCTCCATACTCGACAGTTTATGCGTATGCTATGTGTAAATATAGGGCAGGTGCTAATTAGCGTGTCAATTCTTCTCGGCTGAATCAGTCATTTCATTTCTTCATGTTTggg                                                                         <  2:683226/140‑3 (MQ=16)                                                                   atCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAGCAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGc                                                                        <  2:1165201/143‑1 (MQ=255)                                                                     cTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCg                                                                      >  1:900047/1‑143 (MQ=255)                                                                      tttgtCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAAGGCTATGGGTGAATATGAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCgc                                                                     >  1:623282/1‑142 (MQ=255)                                                                       ttttCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATATTTAAGcgcat                                                                    >  2:828239/1‑139 (MQ=255)                                                                           ccAGGACACCACCATCCACTGTCTCACCATACTCGACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttttt                                                                <  1:1106796/143‑1 (MQ=255)                                                                             aGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtc                                                              >  1:748633/1‑143 (MQ=255)                                                                              ggACTACACCAGCCTCTGTCTCGCCATACTCGACAGTTGATGCCAATGCGATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtct                                                             <  2:190654/143‑1 (MQ=18)                                                                               gACAACACCATCCACTTTCTCACCCTACTCAACATTTTATGCCAATGCTATTGGTGAATATAAGGAAGGTGCGAATACGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtctc                                                            <  2:112366/143‑1 (MQ=18)                                                                               gACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATCAGGAAAGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGGCATTTCATCTCTCCATGTTTGAGCCGATTTTTtctc                                                            >  2:896220/1‑143 (MQ=25)                                                                                acaacaCCATCAACTGTCGCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATAGAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCGCGGCTGACTCAGTCATTTCAGTTCGTCATGTCTGAGCCGATTTTTACTcc                                                           >  2:956904/1‑143 (MQ=21)                                                                                 caacaCCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTccc                                                          <  2:621414/143‑1 (MQ=255)                                                                                    cacCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTa                                                       >  1:934621/1‑143 (MQ=255)                                                                                     acCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaa                                                      >  2:609395/1‑143 (MQ=255)                                                                                      ccATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAACTTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaaa                                                     <  1:1032018/143‑1 (MQ=255)                                                                                       cagcagcTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAAt                                                    <  1:388928/137‑1 (MQ=255)                                                                                         cccgctggcgcACCATACTCAGCGGTTCATTCCAATGCTATGGGCGCATATAAGGAAGGTGCGAATAAGCGGGGATATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAGTTTTTCTCCCGTAAATGc                                                  <  2:883556/133‑1 (MQ=17)                                                                                           aaCTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTGATGGCAGTGCGTCAAGATCAAGACGTATTTTTCTCCCGTAAATGCCt                                                >  1:547396/1‑143 (MQ=21)                                                                                           aaCTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCt                                                >  2:86100/1‑143 (MQ=255)                                                                                              gggctcaccgggagcAACAGTTGATGCCAACGCTGTGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGa                                             <  1:328952/129‑1 (MQ=17)                                                                                               gTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATGTCGTTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGaa                                            >  1:84613/1‑143 (MQ=255)                                                                                                  tcACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCa                                         <  1:103510/143‑1 (MQ=255)                                                                                                   cACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAg                                        >  2:492262/1‑143 (MQ=255)                                                                                                    aCCATACTCAACGGTTGATGCCAATGCTATGGGTGCATATAAGGAATGGGCGAATAAGCGGGACCAGACTATTACGCGTACGCAGTCCCGAGCGGCCGCCAGTTTGGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGc                                       <  1:1195884/143‑1 (MQ=9)                                                                                                    aCCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCCTTTCATTTCTTCATGTTTAAGCCGATTTTTTCTCCCGTAAGTGCCTTGAAACAGc                                       >  1:201310/1‑143 (MQ=255)                                                                                                    aCCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTGATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTCACTTGCTTGCATCAGc                                       >  2:794897/1‑143 (MQ=18)                                                                                                    aCCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCGGTAAATGGCTTGAATCAGc                                       >  1:59884/1‑143 (MQ=255)                                                                                                    aCCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGc                                       <  1:1139337/143‑1 (MQ=255)                                                                                                    aCCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGc                                       >  1:627172/1‑143 (MQ=255)                                                                                                    aCCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCCTAAATGCCTTGAATCAGc                                       >  2:700710/1‑143 (MQ=255)                                                                                                      cATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAAGCAGCCt                                     >  1:175518/1‑143 (MQ=255)                                                                                                           tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAACGTTCGTGAATCAGCCTATTTa                                >  2:891693/1‑143 (MQ=17)                                                                                                           tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTa                                >  1:939123/1‑143 (MQ=255)                                                                                                           tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATCTTTTCTCCCGTCACTGCCTTGAATCAGCCCATTTa                                >  2:866100/1‑143 (MQ=255)                                                                                                           tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATGTCATTTCTTCATGTTTGAGCCGCTTTTGTCTCCCGTACATGCCTTGAATCAGCCTCTTTa                                >  2:1035894/1‑143 (MQ=17)                                                                                                             aaCAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGTAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGa                              >  1:420959/1‑143 (MQ=255)                                                                                                                 gTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGAcctt                          >  2:190696/1‑141 (MQ=255)                                                                                                                   tGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGttt                        <  1:828239/143‑1 (MQ=255)                                                                                                                      tGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttctt                     <  2:934621/143‑1 (MQ=255)                                                                                                                       gtcAATGCTATGGGGGAATAGAAGGAAGGTGCGAAGAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttcttc                    <  1:74805/141‑1 (MQ=255)                                                                                                                          aaTGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTCCTTCGcc                 >  2:642662/1‑143 (MQ=255)                                                                                                                             gCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCAtt              <  2:939123/143‑1 (MQ=40)                                                                                                                              cTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCAttt             <  1:851422/143‑1 (MQ=40)                                                                                                                               tATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTAAGTCATTTCATTTCTTCGTGTTTGAGCCGATGTTTTCTCCCGTCAACGCCTTGAATCAGCCACGTCAGCACGTTTCTTCGCCactca            >  2:1055621/1‑139 (MQ=14)                                                                                                                                  gggTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAgg         >  2:617078/1‑143 (MQ=37)                                                                                                                                    gTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCg       >  1:361771/1‑143 (MQ=35)                                                                                                                                    gTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGGTTCTTCGCCATTTAAGGCg       >  1:501574/1‑143 (MQ=25)                                                                                                                                    gTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATGTTTTCTCCCGTCAATGCATTGAACCCGCCAATTGAGACCCTTTCTTCGCAGTTTAATGCg       >  2:1159037/1‑143 (MQ=11)                                                                                                                                     tGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGt      >  1:860529/1‑143 (MQ=34)                                                                                                                                     tGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTATTCGTGTTAGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGAACGTTTCTTCGCACTATAATGCGt      >  2:381209/1‑143 (MQ=11)                                                                                                                                      gAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTGTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCCTTTAAGGCGtt     >  2:995695/1‑143 (MQ=18)                                                                                                                                         tataAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATc  >  1:593046/1‑143 (MQ=31)                                                                                                                                         tataAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGGAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATc  <  1:334543/143‑1 (MQ=14)                                                                                                                                         tataAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCAGTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAACTTCCGTGAATCAGCCTATTTAGACCGTTTCTTCGCCCTTTAAGGCGTTAta  >  2:782495/1‑142 (MQ=11)                                                                                                                                              |                                                                                                                                          TTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATC  >  NC_000913/2288776‑2289054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.