| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 1 (0.010) | 65 (0.940) | 49/284 | 0.3 | 98.5% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 1 (0.010) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
AGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGC > NC_000913/4001502‑4001780 | aGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATc < 1:689317‑M1/143‑2 (MQ=255) cggggttgatcgTGTCGAACGGGGCGACGCCGGGCGACTGCGCGTACAAGCTGAACTTGGCCAGGGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGCCGGCCTGCATctcc < 2:489576‑M1/138‑5 (MQ=255) agggatTGGTCTTGGCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGATATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc < 1:147680‑M1/141‑5 (MQ=255) aTGGATTGTTCTTTTCGTACCGGCCGACGACGCGCGACTGCCCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc < 1:11945‑M1/143‑5 (MQ=255) aTGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc < 1:149919‑M1/143‑5 (MQ=255) tGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTATCTTTGAAGACGACGACGGACAGCATcccca > 2:14639‑M1/1‑138 (MQ=255) gATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATGTGAACTTGGCCAGGGCCGGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttc > 1:391411‑M1/1‑136 (MQ=255) tGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTCCATctccttcttc > 2:408909‑M1/1‑133 (MQ=255) gATCTTGCCGCCCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTAGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGCAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttct < 1:844339‑M1/143‑12 (MQ=255) tCTTGTCGAACCGGACGACGACGAGCGACTGAGCGTACAATCTGAACTTGGCCAGAGCCTGGCAAGCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGATTCTTTGAAGACGACGACGGCCTGAATcttcgtcttcttt > 2:944764‑M1/1‑130 (MQ=255) ttGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctt < 1:912211‑M1/143‑16 (MQ=255) ttGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctt > 1:920948‑M1/1‑128 (MQ=255) ggACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcg > 2:336845‑M1/1‑118 (MQ=255) cgacgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaa < 1:1117485‑M1/143‑29 (MQ=255) acgacgcGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaaga < 2:680710‑M1/143‑31 (MQ=255) acgacgcGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaaga < 2:631681‑M1/143‑31 (MQ=255) gacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatc > 2:863157‑M1/1‑111 (MQ=255) gacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatc > 1:144314‑M1/1‑111 (MQ=255) acgaGCGACGGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatca < 2:27731‑M1/143‑34 (MQ=255) cgaGTGACTGCGCGTACAATCTGGACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcac < 2:486365‑M1/143‑35 (MQ=255) cgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCGTGCATctccttcttcttctttgaagatacggaagatcac > 1:1019635‑M1/1‑109 (MQ=255) gaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGCCACGTTTCTTTGAAGACGACCACGGCCCGCATctccttcttcttctttgacgatgcggaagatcacg > 1:1134296‑M1/1‑108 (MQ=255) cgcGACTGCGCGTACAGGCTGGACTGGGCCAGAGCCTCGCAACCCGCCCGGAACTGGAAGGCCTCGAAGCCTCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgc < 2:1079731‑M1/142‑37 (MQ=255) aGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCACctccttcttcttctttgaagatgcggaagatcacgc < 1:901921‑M1/143‑37 (MQ=255) cGACTGCGCGTACAATCGGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccg < 1:774987‑M1/143‑39 (MQ=255) agacggcccttacaatctgaaCTTGGCGAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctgtgaagatgcggaagatcacgccg < 2:56214‑M1/133‑39 (MQ=255) cgcgTACAATCTGAACTTGGCCAGAGCCTTGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaact > 2:616773‑M1/1‑99 (MQ=255) cgcgTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaact > 1:558120‑M1/1‑99 (MQ=255) aCAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGAACACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccact < 1:390082‑M1/143‑50 (MQ=255) aaTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgt > 1:737778‑M1/1‑92 (MQ=255) aaTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactacactgt > 1:32184‑M1/1‑92 (MQ=255) gAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcat > 1:672471‑M1/1‑87 (MQ=255) cTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagacaacgccggtaactccactgccgcacttc > 2:628018‑M1/1‑84 (MQ=255) tttttcagtgcCTGGAAACCCGCCCGGAACCGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGCCGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttac < 1:349120‑M1/138‑61 (MQ=255) ttGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTCTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagaacacgccggtacctcccccgcggcatttac > 2:1079266‑M1/1‑83 (MQ=255) gttgccaggctctggcaacccgcCCGGAACTGGAAGACATCGAAGCATCGGCACGTGTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaaggtgcggaagatcacgccggtaacaccactgtggcatttac > 1:947574‑M1/12‑83 (MQ=255) cAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactgcactgtggcatttaccatcc > 1:603518‑M1/1‑78 (MQ=255) agagCCTGTCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcctctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccg < 1:108282‑M1/143‑67 (MQ=255) ccggcaCCCCCCCCCGAACTGGAAGACATCGCAGCATCGGCACGTTTCTTTGATGACGACGCCGGCCTGCATttccttcttcttctttgaagatgttgtagatcatgccggtaactccactgtggcatttaccatccgtgatg < 2:432243‑M1/141‑72 (MQ=255) cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg < 1:27652‑M1/143‑72 (MQ=255) tGGCATCCCGCCCGGAACTGGAAGCCATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttctgctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatgg < 2:912996‑M1/143‑73 (MQ=255) tGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatgg > 1:593458‑M1/1‑71 (MQ=255) gCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGATTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagctcacgccggtaactccactggggcatttaccatccgttagggtc > 1:31173‑M1/1‑69 (MQ=255) aaCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgt < 1:685389‑M1/143‑77 (MQ=255) ggcgggagctGGAGGACATCGACGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgttgcatttaccatccgtgatggtcgtctgtt < 2:888482‑M1/139‑82 (MQ=255) cccgGAACTGGAAGACATCGAAGCATCGGCACGATTCATTGAAGACGACGACGGCCTGCAGctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaacatccgtgatggcagagtgtta > 2:676192‑M1/1‑61 (MQ=255) ccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttta < 2:558120‑M1/143‑84 (MQ=255) ccgGAACTGGAAGACATCGAAGCAGCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttta < 1:23446‑M1/143‑84 (MQ=255) agctgGAAGACATCGACGCATCGGCACGTTGCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatgacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactct < 2:1135866‑M1/141‑88 (MQ=255) tGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcgtttaccatccgtgatggtcgtctgtgtactctgcg > 1:92273‑M1/1‑53 (MQ=255) ggAAGACTTCGAAGCATCGGCACGCTTCTTTGCAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgt < 2:375736‑M1/143‑92 (MQ=255) aaGACATCGAAGCATCGGCACGTTTCTTTGCAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGCAGCCGCGGAAGATCCCGGCGGTCCACCCCCCGCGGCACTCACCCTCCGTGCTGCTCGTCCGTCTCCTCTgcgtgc > 2:270021/1‑142 (MQ=255) gACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagc < 2:737778‑M1/143‑96 (MQ=255) cATCGAGGCATCGGCACGTTTCTTTGAGGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagctcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgt < 2:297105‑M1/143‑98 (MQ=255) cGAAGCAGCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 2:434258‑M1/143‑101 (MQ=255) tCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct < 2:920948‑M1/143‑118 (MQ=255) cTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtcactccactgtggcatttaccatccgtgatggtcgtctgtctactctgcgtgagcgtgaactgcccacataccgcctg > 2:75906‑M1/1‑25 (MQ=255) cTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctg > 2:980344‑M1/1‑25 (MQ=255) gAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatacgtgatagtcgtctgtttactctgggtgagagtcaatttcccgcgtttcgacggttgc > 2:34673‑M1/1‑21 (MQ=255) gaagaggacggcctgcATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgta < 2:867194‑M1/137‑126 (MQ=255) acgacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtgt > 1:54032‑M1/1‑17 (MQ=255) acgacgacgGCCTGCATctccttcttcttcttcgcagatgcggcagatcacgccggtaactccactgtggcattcaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtat < 1:854500‑M1/143‑127 (MQ=255) acgacgacgGCCGGCATctccttctgcttctttgacgatgcggatgatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgaccgcttttcgtctgtatcgtat < 2:983799‑M1/143‑127 (MQ=255) gacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgc < 2:672471‑M1/143‑129 (MQ=255) cgacgGCCTGCATgtccttcttcctcttggaagatgcggacgatcacgccggtacctcccctgtggcacttaccatccgtgatggtcgtctgtttactctgcgttggcgtgcactgcccgcttttcgtctgtatcgtatgcgt < 2:144314‑M1/143‑131 (MQ=255) cTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtc > 2:646681‑M1/1‑6 (MQ=255) | AGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGC > NC_000913/4001502‑4001780 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |