New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12078058 (0.120)59 (0.970) 43/252 0.3 88.7% coding (305/630 nt) stfP e14 prophage, uncharacterized protein
?NC_000913 = 1209602 8 (0.130)pseudogene (18/501 nt) stfE pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

AGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAA  >  NC_000913/1209464‑1209743
                                                                                                                                          |                                                                                                                                             
aGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGGAGGCCACGGAACCGGGACACCAACAGGTAATGCagaggcgt                                                                                                                                           >  2:453795/1‑139 (MQ=255)
  gCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGGACCGGGACACCAACAGGTAATGCAGAGccttct                                                                                                                                         >  2:476217‑M2/1‑137 (MQ=255)
  gCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcctaca                                                                                                                                         <  2:947281‑M2/143‑7 (MQ=255)
    aaTTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttgtcc                                                                                                                                       <  1:198316‑M2/143‑9 (MQ=255)
    aaTTTATTTGGCGGATAAGCCTTTGCCAGTGCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcc                                                                                                                                       >  2:80600‑M2/1‑135 (MQ=255)
      tttatttGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGCAGGCCACGGAACCGGGACCCCAACAGGTAATGCAGCGccttctcccc                                                                                                                                     <  1:224651‑M2/143‑11 (MQ=255)
             gTCGGATCAGCCTGTGCCCGTCCCGGGCATTCGTCAGCCGACGCAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaag                                                                                                                              >  2:883608‑M2/1‑126 (MQ=255)
             gTCGGATACGCCTTTGCCAGTTCAGGTTCTTCTGCAGCAGCAAAATCGGCACCATTGTATTTCAGCCAGACTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGACTTCTCCCAAACCAAc                                                                                                                              <  2:222244/143‑1 (MQ=255)
              tCCGATAAGCCGTTGCCAGTTCCGGGTACTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaagg                                                                                                                             >  1:495779‑M2/1‑125 (MQ=255)
                  aTAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccacaccaagctttt                                                                                                                         <  2:34248‑M2/143‑23 (MQ=255)
                      gCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACAGGGACACCAACAGGTCATGCAGAACCTTCTCCCAAACCagggcttccgac                                                                                                                     >  2:126210/1‑132 (MQ=255)
                       ccgtggccagtGCGGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTTAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                                                                    >  2:1117589‑M2/6‑116 (MQ=255)
                       ccTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctgccaaaccaaggttttcgaga                                                                                                                    <  1:471718‑M2/143‑28 (MQ=255)
                       ccTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                                                                    >  1:1080671‑M2/1‑116 (MQ=255)
                       ccTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                                                                    <  2:151612‑M2/143‑28 (MQ=255)
                        cTTGGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGTACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagag                                                                                                                   >  1:1058709‑M2/1‑115 (MQ=255)
                             ccAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaagggtttcgagagccgtt                                                                                                              <  1:1011495‑M2/143‑34 (MQ=255)
                              cAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgttt                                                                                                             >  1:435966‑M2/1‑109 (MQ=255)
                              cAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAGGCCGAGccttctcccaaaccaaggaactcgagagcactca                                                                                                             <  2:119996‑M2/143‑35 (MQ=255)
                                gTTCCGGGTATTCTTGCGTAGAGAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTTTCCCAACCCAACGTTTATGAAAATGAAGaaa                                                                                                           <  2:776163/143‑1 (MQ=255)
                                atccaggggattctTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGGAATGCAGAGccttctcccaaaccaaggctttcgagagccgtttgc                                                                                                           <  2:28073‑M2/138‑37 (MQ=255)
                                 ttCCGGTTCTGCTTCAGCAGAGAAAGCGGCACCGTTGCATTCCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAAACGTGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                          >  2:852044‑M2/1‑106 (MQ=255)
                                 ttCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTCCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                          >  2:10375‑M2/1‑106 (MQ=255)
                                   tcgGGTATTCTTACGATGAAGAGGCGGCACCAGTGCAGTTCGGCCAGCCTGTTGGCGGAGTGGCTGAAGGCGACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcaca                                                                                                        >  2:181156‑M2/2‑104 (MQ=255)
                                   ccGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcaca                                                                                                        <  1:1036183‑M2/143‑40 (MQ=255)
                                     gggTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGCGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCCGACccttctcccaaacccaggttttcgagagccgtttgcacagt                                                                                                      <  1:623826‑M2/143‑42 (MQ=255)
                                     gggTACTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGAAATGCAGAGccttctccacaacccaggctttcgcgagccgtttgcacagt                                                                                                      <  2:181235‑M2/143‑42 (MQ=255)
                                     gcgtaTGCCTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCGACTGAACCGGGACACCAACGGGTAAGGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagt                                                                                                      >  1:715076‑M2/3‑102 (MQ=255)
                                      ggTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACaa                                                                                                     >  2:954420/1‑143 (MQ=255)
                                             ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccacaccaaggagttcgatagccgtctacccagggccagccg                                                                                              <  2:709791‑M2/143‑50 (MQ=255)
                                             ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCATGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACAAACAGGTAATGCAGAGccttctcccaaaccaaggaatacgagagacgttcgcacagtgccacacg                                                                                              <  2:517521‑M2/143‑50 (MQ=255)
                                                agcagACAAAGCGGCACCATGGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatt                                                                                           >  2:804529‑M2/1‑91 (MQ=255)
                                                agcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatt                                                                                           >  1:850280‑M2/1‑91 (MQ=255)
                                                 gcagAAAAAGCGGCACCATTGCATTTCAGGCAGCCTGTTGGGAGAGTGGCTGACGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttggcgagccgattgcacagcgccatcccattt                                                                                          <  2:158764‑M2/143‑54 (MQ=255)
                                                 gcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaagggtttcgacagccgtttgcacagtgccatccgattc                                                                                          <  2:37300‑M2/143‑54 (MQ=255)
                                                 gcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACAACAAGAGGGAATGCAGAGccgccgggcaaaccaaggtgttcgagagccgtttgcacagtgcgatccgactt                                                                                          <  2:21537‑M2/143‑54 (MQ=255)
                                                   agAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttga                                                                                        <  1:842263‑M2/143‑56 (MQ=255)
                                                       agttcggcaCCATTGCATTTCGGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatc                                                                                    >  2:871619‑M2/5‑84 (MQ=255)
                                                       aaaGCGGCACCATTGCATTTCAGCCAGCCTGGTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatc                                                                                    >  1:532506‑M2/1‑84 (MQ=255)
                                                         aGCGGCACCCTTGTATTGCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaacccaaggttttcgagagccgttcgtacagtgccatccgatttgatatcgc                                                                                  >  1:739098‑M2/1‑82 (MQ=255)
                                                             gCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTCATGCAGAGccttctcccaaaccaaggttctcgcgagccggttgcacagtgccatccgatttgctagcgccaca                                                                              <  2:667475‑M2/143‑66 (MQ=255)
                                                              cACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGtcttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaac                                                                             >  2:493375‑M2/1‑77 (MQ=255)
                                                              cACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaac                                                                             >  1:500710‑M2/1‑77 (MQ=255)
                                                                 cATTGCATTTCAGCCAGCCTGTTGGCGGAGCGGCTGAAGGCCACCGAACCGGGCCACCAACACGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgattgcacagtgccatccgatttgatatcgccaaacgga                                                                          <  1:586865‑M2/143‑70 (MQ=255)
                                                                   ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACACGTAATGCAGAGccttctcccaacccaaggttttcgagagccgtttgcaccgtgccatccgattcgctctcggcaaacgcctt                                                                        <  1:991184‑M2/143‑72 (MQ=255)
                                                                        tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgctatcgccaaacggctccttgc                                                                   <  2:564671‑M2/143‑77 (MQ=255)
                                                                              ccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggctta                                                             <  1:72828‑M2/143‑83 (MQ=255)
                                                                                    tGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaacaaaggcttacgagagccgtttgaacagcgccgtcttatttgatatcgccaaacggattcttgcggcttaacagca                                                       <  1:223351‑M2/143‑89 (MQ=255)
                                                                                      ttGGCGGAGTGGGTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagc                                                     >  2:694780‑M2/1‑53 (MQ=255)
                                                                                          cGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaagggtttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcacgc                                                 <  1:861940‑M2/143‑95 (MQ=255)
                                                                                          cGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAAGCCATCATTGCTGCTTTTAGCAGGGGGATTTAACATGCTTATTGGc                                                 >  1:996198/1‑143 (MQ=255)
                                                                                           ggAGTGGCTGAAGGCCACGGAACTGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattctttcggcttaacagcagcgcgcg                                                <  2:1186588‑M2/143‑96 (MQ=255)
                                                                                           ggAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattctttcggcttaacagcagcgcgcg                                                <  1:684072‑M2/143‑96 (MQ=255)
                                                                                                 gCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgctatcgccaaagggattcttgcggcgtaacagcagcgcgcgaagtgc                                          <  2:932188‑M2/143‑102 (MQ=255)
                                                                                                   tGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacgggttcttgcggcttcacagcagcgcgcggagtgcgg                                        <  2:544613‑M2/143‑104 (MQ=255)
                                                                                                   tGAAGCCCACGGAACCGGGACACCAACGGGTAATGCGGAGccttctcccaagccaaggttttcgagagccgtttgcacagtgccatccgatttgatagcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcgg                                        >  2:86269‑M2/1‑40 (MQ=255)
                                                                                                    gAAGGCCAGCGAACCGGGCAACCAACGGGTAATGCAGCGccttgtcccaaaccaagggtttcgagagccgtttgcacagtgccatccgattttatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggt                                       >  2:202125‑M2/1‑39 (MQ=255)
                                                                                                      aGGCCACGGAACTGGGACACTAACAGGTAATGCAGAGccttctcccaaaccaagtttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaa                                     >  2:1093066‑M2/1‑37 (MQ=255)
                                                                                                      aGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCACATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACACGCTTATGGGCTATGTAAGAGTa                                     >  1:544571/1‑143 (MQ=255)
                                                                                                        gCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgggcgcagtgcggtaagt                                   <  1:740818‑M2/143‑109 (MQ=255)
                                                                                                           aCGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaac                                <  1:789679‑M2/143‑112 (MQ=255)
                                                                                                             ggAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggagtcttgcggctgaaccgcacagcgcggagtgcggtaaatcaccg                              <  2:732592‑M2/143‑114 (MQ=255)
                                                                                                                 ccGTGATACTAACAGGTAATGCAGAGCCTTCTACCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGa                          <  1:113926/143‑1 (MQ=255)
                                                                                                                  cGGGCCACCAACAGGTCATCCAGAGccttcccccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgt                         >  1:999427‑M2/1‑25 (MQ=255)
                                                                                                                   gggACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagacgttaggacagtgccatccgagttgatatcgccaaagggattcttgcggcttaacagcagcgcgcgaagtgcggtaagaaactaggcgtg                        <  2:317474‑M2/143‑120 (MQ=255)
                                                                                                                    ggACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcggcgcgcgaagtgcggtgagtaactggtcgagc                       <  1:1042894‑M2/143‑121 (MQ=255)
                                                                                                                          cAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcgtaacagcagcgcgcgaagtgcggtcagtaactggtcgtgccgcccc                 <  1:6053‑M2/143‑127 (MQ=255)
                                                                                                                              atgTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGAt             <  1:32661/141‑1 (MQ=255)
                                                                                                                                  aaTGCAGCGccttctcccaaaccaaggttttcgagatccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccag         >  1:704288‑M2/1‑9 (MQ=255)
                                                                                                                                   aTGCAGAGacgtctcccaacccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccagg        >  2:623826‑M2/1‑8 (MQ=255)
                                                                                                                                    tGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgattcgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtgagtaactggtcgtgacgcccgttctcccggc       <  2:366856‑M2/143‑137 (MQ=255)
                                                                                                                                      cAGAGCCTTCTCCCAAACCATCGTTTATGACAATGAAGAAACAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACg     <  1:954420/143‑1 (MQ=255)
                                                                                                                                        gagccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtacgtaactggtcgtgccgccccttctccaggctggc   <  2:830220‑M2/143‑141 (MQ=255)
                                                                                                                                         agccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggca  >  1:723255‑M2/1‑2 (MQ=255)
                                                                                                                                          |                                                                                                                                             
AGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAA  >  NC_000913/1209464‑1209743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.