New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1293032 =6 (0.090)72 (1.080) 54/284 0.1 92.3% intergenic (‑110/‑495) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)intergenic (‑55/‑483) insA/uspC IS1 repressor TnpA/universal stress protein

Only 100 of 137 total aligned reads displayed.

GATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGG  >  NC_000913/1292890‑1293171
                                                                                                                                              |                                                                                                                                           
gcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtcagttggcaacatcacct                                                                                                                                             <  2:775628‑M1/1‑1 (MQ=255)
gcgctgatgtccggcggtgcttttgccgttacgcaccaccccctcagcagctgaacaggacggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacct                                                                                                                                             >  2:22086‑M1/143‑143 (MQ=255)
 cgctgatggccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacctt                                                                                                                                            >  2:379784‑M1/142‑143 (MQ=255)
 aTGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCCAAATTGTTCTTTAtttt                                                                                                                                            >  2:187205/1‑143 (MQ=255)
 aTGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTGTAtttt                                                                                                                                            >  2:561699/1‑143 (MQ=255)
  gctgatgtccggcggtgcttttgccgttacgcaccaccacgtaagtagctgaacaggagggacagatgatagaaacagaagccactggagcacctcaaaaacaccatcatacgctatatcagtccgttgtccgcatctccttc                                                                                                                                           <  2:274622‑M1/3‑2 (MQ=255)
   gttgttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTtgt                                                                                                                                          <  2:665361/143‑1 (MQ=255)
    tgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTtgtg                                                                                                                                         >  2:181375‑M1/139‑143 (MQ=255)
    tgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacatcaaaaacaccatcatacactaaaccagtcagctgtcagcatcactTtgtg                                                                                                                                         <  1:369515‑M1/5‑1 (MQ=255)
    tgacgccgggcggtgcttttgccgttacgcaccaccccggcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacacgaaatcagtaagttggcagcatcaccTtgtg                                                                                                                                         >  2:459622‑M1/139‑143 (MQ=255)
     tgttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTtgtgt                                                                                                                                        >  2:832425/1‑142 (MQ=255)
         tccggcggtgctgttgccggtacgcacgaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTgccgcc                                                                                                                                    >  2:210525‑M1/134‑143 (MQ=255)
         cAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAGGGAATTCAAAATTGTTCTTTATTTTGTGCCGgg                                                                                                                                    <  2:313184‑M2/143‑3 (MQ=255)
           cggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggcgggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggccgcatcacaTTCTGCCGCCaa                                                                                                                                  <  1:421855‑M1/12‑1 (MQ=255)
           cggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaa                                                                                                                                  >  2:513429‑M1/132‑143 (MQ=255)
             aTTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGGTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaat                                                                                                                                >  1:797592‑M2/1‑137 (MQ=255)
               tttAAGTGCTTCGCTCATTGTAGTAATCTCAAACTCTGAGTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatga                                                                                                                              >  1:69228‑M2/1‑135 (MQ=255)
               ggtgcttttccccttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaa                                                                                                                              >  2:1100565‑M1/128‑143 (MQ=255)
                gtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaat                                                                                                                             >  2:60574‑M1/127‑143 (MQ=255)
                 tgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaata                                                                                                                            <  2:979461‑M1/18‑1 (MQ=255)
                 tAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgact                                                                                                                            <  2:160869‑M2/143‑11 (MQ=255)
                   aGTGCTTTGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactcc                                                                                                                          >  1:1082058‑M2/1‑131 (MQ=255)
                      gCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCACGAGCCAGGAATGTAAGGAATTCAGAGTTGTTCTTTATTTTGTGCTGggtaatgactcgaag                                                                                                                       <  2:131355‑M2/143‑16 (MQ=255)
                       cTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGACTGTAAGGAATTCAAAATTGTTCTTTATCTTGTGCCGgataatgactccaact                                                                                                                      <  1:208409‑M2/143‑17 (MQ=255)
                           gCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttatt                                                                                                                  >  1:565458‑M2/1‑123 (MQ=255)
                             tCATTGTAGTAATCTCAAACGTATATTGGGGTGGTGTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattga                                                                                                                >  1:800583‑M2/1‑121 (MQ=255)
                               aTTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgata                                                                                                              >  1:920067‑M2/1‑119 (MQ=255)
                                  gtagtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtg                                                                                                           >  1:329964‑M2/1‑116 (MQ=255)
                                  accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAg                                                                                                           >  2:659690‑M1/109‑143 (MQ=255)
                                   ccaccccgccagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGc                                                                                                          >  2:745233‑M1/108‑143 (MQ=255)
                                     gtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttt                                                                                                        <  1:801228‑M2/143‑31 (MQ=255)
                                          ctcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgaatacaacttattgatagtgttttaagt                                                                                                   <  2:778690‑M2/143‑36 (MQ=255)
                                           tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGCATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                                  <  1:952033‑M2/143‑37 (MQ=255)
                                            cAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGTATGTAAGGAATTCAAAAGTTTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttc                                                                                                 >  2:267632‑M2/1‑106 (MQ=255)
                                             agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAc                                                                                                >  1:979461‑M1/98‑143 (MQ=255)
                                             agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGACAATAAATATATTTTCATAAAATTGGCCAGACAAGAc                                                                                                <  1:1049383‑M1/46‑1 (MQ=255)
                                             aagCTTATATTGGGGTGGTGTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttca                                                                                                >  2:134971‑M2/1‑105 (MQ=255)
                                              gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcg                                                                                               <  2:440209‑M1/47‑1 (MQ=255)
                                               tagctgagcaggagagacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgc                                                                                              >  2:1137342‑M1/96‑143 (MQ=255)
                                               aCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcaga                                                                                              >  2:289906‑M2/1‑103 (MQ=255)
                                                     aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCata                                                                                        <  2:24727‑M1/54‑1 (MQ=255)
                                                          ggtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat                                                                                   >  2:599264‑M2/1‑92 (MQ=255)
                                                                 cagctgatagaaacagaagccactggagcacctcaaaaacacatcatacacgaaatcagtaagttggcagcaccaccTCGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTa                                                                            >  1:985106‑M1/78‑143 (MQ=255)
                                                                   ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAGAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTaca                                                                          <  1:866085‑M1/68‑1 (MQ=255)
                                                                    ggaGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                                                         >  1:740967‑M2/2‑82 (MQ=255)
                                                                       tagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCga                                                                      <  1:156869‑M1/72‑1 (MQ=255)
                                                                       tagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCga                                                                      <  2:526787‑M1/72‑1 (MQ=255)
                                                                         gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgatg                                                                    <  2:353465‑M1/74‑1 (MQ=255)
                                                                          aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgatga                                                                   <  2:888711‑M1/75‑1 (MQ=255)
                                                                              agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATTTTTTCTTAAAAAAAACCAGAAAAGACGACGCAAATAGCCATATTTACACCGACGATTTc                                                               <  2:841989‑M1/79‑1 (MQ=255)
                                                                              agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTc                                                               <  2:788208‑M1/79‑1 (MQ=255)
                                                                               taGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtgcagataatgcccgatgactttgtcatgcagctccac                                                              >  2:750566‑M2/1‑71 (MQ=255)
                                                                                  agCCTTAAATTCAGTTGTGCAATAGCCAGGCATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccga                                                           <  1:1017323‑M2/143‑76 (MQ=255)
                                                                                       tggagctcagcaaaaacaccatcagacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGt                                                      >  1:930761‑M1/56‑143 (MQ=255)
                                                                                       tAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg                                                      <  2:933562‑M2/143‑81 (MQ=255)
                                                                                         gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGa                                                    >  2:566097‑M1/54‑143 (MQ=255)
                                                                                            cacctgaaaaccaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCTGATATCCCGATTTACACCGATGATTTCGCAGCACGTGAGGt                                                 >  1:518268‑M1/51‑143 (MQ=255)
                                                                                               gTTGTGCAATAGCCGGGAAGGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacgtattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac                                              >  1:444452‑M2/1‑55 (MQ=255)
                                                                                                ttGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca                                             >  2:698205‑M2/1‑54 (MQ=255)
                                                                                                ttGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca                                             <  1:86861‑M2/143‑90 (MQ=255)
                                                                                                tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCGTATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaa                                             <  2:1144893‑M1/97‑1 (MQ=255)
                                                                                                tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTACCCAGAAAAGACGCGGCATATAGCCCTATTTACACCCACTATTTCGCAGCCcttgaggctcaa                                             <  1:1097961‑M1/97‑6 (MQ=255)
                                                                                                       aTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgactt                                      >  2:801228‑M2/1‑47 (MQ=255)
                                                                                                        accatcctacactaaatcagtaagttggtagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTg                                     >  2:494428‑M1/39‑143 (MQ=255)
                                                                                                         ccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGa                                    >  2:613081‑M1/38‑143 (MQ=255)
                                                                                                          gCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccg                                   <  2:796270‑M2/143‑100 (MQ=255)
                                                                                                           atcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAtt                                  >  2:702728‑M1/36‑143 (MQ=255)
                                                                                                            cAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaactgattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgggaacgacagcgacttccgtc                                 <  2:881131‑M2/143‑102 (MQ=255)
                                                                                                             aGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgccgctcccccgattttgagaacgacagcgacctccgtcc                                <  1:33352‑M2/143‑103 (MQ=255)
                                                                                                             aGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcgaccgattttgagaacgacagcgacttccgtcc                                <  2:1131743‑M2/143‑103 (MQ=255)
                                                                                                               tacactaaagcagtaagttggcagcatcaccTTGGGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATg                              >  1:533272‑M1/32‑143 (MQ=255)
                                                                                                                tcactatatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCACAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGt                             >  2:607444‑M1/31‑143 (MQ=255)
                                                                                                                acactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGt                             <  2:1118725‑M1/113‑1 (MQ=255)
                                                                                                                acactaaagcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGt                             >  2:1118849‑M1/31‑143 (MQ=255)
                                                                                                                 aTGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagc                            >  1:952583‑M2/1‑37 (MQ=255)
                                                                                                                  tGTAAGGAATTCAAAAGGGTGCTTTGTTGTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagcc                           >  2:963342‑M2/1‑36 (MQ=255)
                                                                                                                  actaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTCAAACCTTCCTGCTTCATGtcc                           <  1:535861‑M1/115‑2 (MQ=255)
                                                                                                                   ctaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTcac                          >  1:603238‑M1/28‑143 (MQ=255)
                                                                                                                    tcattcagtaatttggcagcatcaccGTGTGACGACAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCAGATAGCCCTATTTACACCGATGATTTCGCAGCACATGAGGTTAAAACTTCCTGATTCATGTcaca                         >  1:164853‑M1/27‑143 (MQ=255)
                                                                                                                    tAAGGAATTCACAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt                         >  1:313184‑M2/1‑34 (MQ=255)
                                                                                                                    tAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgctcgtgttttatgttcagataatgcccgatgactttgtcatgccgctccaccgatgttgagaacgacaacgacttccgccccagccga                         <  1:1032059‑M2/143‑110 (MQ=255)
                                                                                                                     aaatcagcaagttggcagcaacaccTTGAGCCGCCAATAAATACCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAt                        >  2:59037‑M1/26‑143 (MQ=255)
                                                                                                                        tcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCCTGTCACAtttt                     <  2:505721‑M1/121‑1 (MQ=255)
                                                                                                                        gAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcca                     <  2:665401‑M2/143‑114 (MQ=255)
                                                                                                                        gAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcca                     >  2:322052‑M2/1‑30 (MQ=255)
                                                                                                                          ggtaagttgccagcatcaccTTGTGCCGCCAATAAATATCTTTTCACAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGGCCGTGAGATAAAAACTTCCTGATTCATGTCACATTTTAt                   >  1:828392‑M1/21‑143 (MQ=255)
                                                                                                                          attatgttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTCGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTAt                   >  1:1086459‑M1/21‑143 (MQ=255)
                                                                                                                          agtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATACAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGACTCATGTCACACTTTAt                   <  1:264491‑M1/123‑1 (MQ=255)
                                                                                                                           ttCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacaccgacttccgtccccgccgtgcgaggt                  <  1:848323‑M2/143‑117 (MQ=255)
                                                                                                                           ttCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagcgccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggt                  <  2:871466‑M2/143‑117 (MQ=255)
                                                                                                                             aagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATggg                >  2:600920‑M1/18‑143 (MQ=255)
                                                                                                                              aaaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgaccttgtcatgcagctccaccgattttgagaacgcccgcgacttccgtcccagccgtgccaggtgct               <  2:412936‑M2/143‑120 (MQ=255)
                                                                                                                                ttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGgag             <  1:738507‑M1/129‑1 (MQ=255)
                                                                                                                                   gcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACGTTTTATGgggagact          <  1:561595‑M1/132‑3 (MQ=255)
                                                                                                                                    gTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctca         >  2:577663‑M2/1‑18 (MQ=255)
                                                                                                                                     agcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTAt        <  2:244535‑M1/134‑1 (MQ=255)
                                                                                                                                      tCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga       >  2:199253‑M2/1‑16 (MQ=255)
                                                                                                                                         ttATTTTGTGCCGtgtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattc    >  2:60315‑M2/1‑13 (MQ=255)
                                                                                                                                          tATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattca   <  2:760157‑M2/143‑132 (MQ=255)
                                                                                                                                           aTTGTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag  >  2:596277‑M2/1‑11 (MQ=255)
                                                                                                                                              |                                                                                                                                           
GATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGG  >  NC_000913/1292890‑1293171

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.