New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1470336 =	NA (NA)	57 (0.860)	4/284	9.8	NA	coding (979/1152 nt)	insI1	IS30 transposase
	?	NC_000913	= 1979270	NA (NA)					intergenic (‑55/‑483)	insA/uspC	IS1 repressor TnpA/universal stress protein
Rejected: Coverage evenness skew score above cutoff.

GACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAAC  >  NC_000913/1470234‑1470466                                                                                                       |                                                                                                                                   gacaagggAATGGAACTGGCCAGACATCTAGAAGTTACTTTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTaaaaa                                                                                            <  1:953897/137‑1 (MQ=0)  tgagcgggaTGGGACTGGCCAAACATCTAGAATTTACTGGGAGCACCGGCGTGAAAGTTTACTTCTGCGATCCTCAGAGTCCATGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAg                                                                                           <  1:762083/135‑1 (MQ=1)                             cagactgtACTGTCAGCACCGGCGTTAAAGGTTACTTCTCCGAGCCTCAGAGTCCTTGGCAGCGGGGAACAAATGATAACACAAATGGGCTAATTCTGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACAt                                                                <  1:135890/136‑1 (MQ=1)                                                                                           cGGGGAACAAATGAGAACACAAATGGGCTAATTCGGGAGTACTTTCCGAAAAAGACATGGCTTGCCCAATATACGCAACATGAACTAGATCTGGTTGCTGGTCAGCAAAACAACAGAATGAGAAAGGCCCAGGAGTTTaaagc  >  1:306235/1‑141 (MQ=1)                                                                                                       |                                                                                                                                   GACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAAC  >  NC_000913/1470234‑1470466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.