Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 3,206,469 | C→G | 16.6% | S3R (AGC→AGG) | ttdA → | L‑tartrate dehydratase, alpha subunit |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,206,469 | 0 | C | G | 16.6% | 221.4 / 14.7 | 118 | S3R (AGC→AGG) | ttdA | L‑tartrate dehydratase, alpha subunit |
Reads supporting (aligned to +/- strand): ref base C (26/62); new base G (14/5); total (44/74) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.19e-04 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 |
Only 100 of 122 total aligned reads displayed.
TAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAG > NC_000913/3206234‑3206707 | tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCA‑TTCCCTGCTCTGTCGCAATATTCATTCTTATTGTCGCGTTGATTCACGAACTGGTAATGACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGa < 2:55961/238‑1 (MQ=255) cTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGaaa < 1:288314/230‑1 (MQ=255) tCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑a < 1:1433478/239‑1 (MQ=255) aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑g‑‑‑‑‑‑g < 2:597756/236‑1 (MQ=255) aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑g‑‑‑‑‑‑g < 1:588961/236‑1 (MQ=255) tCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTTAAGACAAA‑AA‑AAAAAAAGGAGTTTCCAT‑GGTGAGCGgaaagaaaaaacaaaaatcaac > 2:1083770/1‑220 (MQ=255) tCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTTCATAAAAATAC‑AAAAAAAGGAGTTTGCAT‑GATGAGGGAAAGAAATAAGAAA‑‑‑‑A‑A‑‑‑gtctct > 2:288314/1‑234 (MQ=255) tCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTTCAGACAAATAA‑AAAAAATTGAGTTGGCAT‑GATGAGCGGAAAGAAAAAACAA‑‑‑‑C‑A‑‑‑A‑‑‑‑‑‑GGAGt > 1:398496/1‑239 (MQ=255) cGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑Gc < 1:844009/235‑1 (MQ=255) cGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTg < 1:1290429/239‑1 (MQ=255) ttAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTTCAGACAAATAC‑AAAAACTTGGATTGACAC‑TAGGAGGGAAAGTAATAAAAAA‑‑‑‑C‑A‑‑‑A‑‑‑‑‑‑GAAATGaa > 2:601997/1‑239 (MQ=255) aaTTATCCGCAGGTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATa < 2:1382686/239‑1 (MQ=255) tCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTg < 1:1083770/239‑1 (MQ=255) aGCGCAGTGTATTTCGCAAAACATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTTTAGACAAATAA‑AAAAAAATGAGTTGTCATGGTTGAG‑GGAAGTAAAAAACAA‑‑‑‑C‑A‑‑‑A‑‑‑‑‑‑GCAGGGAAAAAAGTG‑ACAGAGATGTTCGc > 2:894581/1‑238 (MQ=255) aGCGAAGGGTATTTCGCAAAACATTGCCA‑TTCCCTGCTCGGGCGCAATATTCATTCTTATTTCCGCGTTGATTCACGAACTGTTAATTACTTATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCt < 2:800534/239‑1 (MQ=255) tgtTTTTCGCAAAACATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTa < 1:1082447/239‑1 (MQ=255) cGCAAAACATTCCCA‑TGCCTTGCTTCGGCGAAATATTCATTCTTATTTTCGCGTTGATTCCCAAACTTTTAATTACATATA‑CTCGGTGGCAAAAAATAAAAACCAAAATTTTTGGTGGTAGTTTGGGGAGGTGAA‑TTTTTCCAGAAAAAAAC‑AAAAACTGAGGTTGCAAT‑GATGAGCGAAAGTAAAAAGCAC‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GAAGTGAATAAGTTG‑AAAGAGATTGTCGCTAAC‑TTTACCGCCAt < 1:618457/239‑1 (MQ=255) aaaaatttGCCATTTCCCTG‑TCTGGCGACATTTTATTTTTTTTTTTCGGGTTGATTCACAAACTTGTTATTAAATATTACAGGGTGAAAAAAAATA‑AAAACCATATTTTTAGTGGTAGTTTGGGGCGGTGAA‑TTTTTCAAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAACAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTAAATAAGTTA‑ACAGAGTTTGTCGTTAAC‑TTTACCGCCATG‑At < 2:1306196/233‑1 (MQ=255) aaaaCATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGA‑TTTTTTCAGACAAATAA‑AAAAAATGGAGTTGGCAT‑GATGAGCGAAAGGAATAAGAAA‑‑‑‑A‑A‑‑‑A‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAAAGAATGTCGCTAAC‑TTTAACGCCATG‑At > 1:251319/1‑239 (MQ=255) aaaaCATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGA‑TTTTTTCAGACAAAAAC‑AAAAAAAGGAGGTGCCAT‑GATGAGCGGAAGAAATAAGCAA‑‑‑‑A‑A‑‑‑A‑‑‑‑‑‑GCAGTGAATAAGTTT‑ACAGAGATTGTGGCTAAA‑TTTATCCCCCTG‑At > 1:59610/1‑239 (MQ=255) aaCATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CCCGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGAAAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑Attt < 1:1192224/239‑1 (MQ=255) tGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTTAA‑TTTTTTCAGAAAAAAAA‑AAAAAAATGAGTTGTCAT‑TATTAGCGAAAATAATAAACAA‑‑‑‑A‑A‑‑‑A‑‑‑‑‑‑GCAGGGGAAAAAATT‑AAAGAGATTGGTGCTCAC‑TTTTACGCCATG‑Aatttttc > 1:642912/1‑234 (MQ=255) ccA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGA‑TTTTTTCAGACAAAAAC‑AAAAAATTGAGTTGTCAT‑GATGAGGGAAAGGAATAAGAAA‑‑‑‑CAA‑‑‑GCAAAAAGCAGCGGATAAGTTG‑ACAGAGATTTTTGCTAAA‑TTTACCCACATG‑Attt > 1:558935/1‑239 (MQ=255) ctttCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGACAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAA‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGCGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGa < 1:677346/237‑1 (MQ=255) a‑TTCCCTGCTCTGGCACAATATTCTTTCTTTTTTTCGCGTTGATTCACGAACGGTTAATTACATTTT‑CACGGTGGCAAAAAATATAAAACCAAATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAC‑AAAAACGGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTACC‑TTTACCGCCATG‑ATTTCTACCCGaa < 1:482289/239‑1 (MQ=255) cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTTCAAACAAATAA‑AAAAACTTGAGTTTGCCT‑TTTGAGGGAAAGTAATAAAAAA‑‑‑‑A‑A‑‑‑A‑‑‑‑‑‑GCAACGAATAAGATT‑AGAGAGAATGTGGGTCAC‑TTTACCGCCCTG‑ATTTCTATCCGAATGc > 2:970454/1‑239 (MQ=255) gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGGGA‑TTTTTTCAAAAAAAAACAAAAAACTGCGGTTGCC‑T‑GATGAGGGGAAGCAATTAACAA‑‑‑‑C‑A‑‑‑C‑‑‑‑‑‑GCACAGAATAAGTTT‑TCAGAGATTGTCGTTACC‑TTTATAGCCCCG‑CTTTCTATCCGAATGccccgggacgt > 2:968220/1‑230 (MQ=255) gcAATATTCATTCTTATTTGCGCGTTGATTCACGAACTGTTAATTACATATT‑CAGGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTCCCAAACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAAAAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACgtg < 1:970454/238‑1 (MQ=255) tatTCTATCTTATTTTCGAGTTTATTCACGAACTGTTAATTAAATATC‑CAGGGTGCCAAAAAATATAAAACCTCATTTGTAGGGGAAGTTTGTGGGGGTGAA‑TTTTCCAAGACAAATAC‑AAAACCTGGAGTTGCCAT‑GAGTAGCAAAAATAAAAAGCAC‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAATTTG‑ACAGAATTTGCCGCTATC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGa < 2:1286999/239‑1 (MQ=255) aactaattcTTATTTTCGCTTTGATACATGAACTGTAAATTCCATATA‑CACGGTGGAAAAAAATAAAAAACAAATTTTTTGGGGTTATTTTATGGGGGAGAA‑TTGTTCAAAAAAAATAC‑AAAATCGGGAGTGGCAGT‑AAGGAAAAAAAGTAAGAAGCAG‑‑‑‑A‑A‑‑‑G‑‑‑‑‑‑ACATGAAATAAGTGG‑AAGGGAATTGGCGCAAAT‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGa < 2:1291506/234‑1 (MQ=255) ttcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTTCAGACAAATAC‑AAAAACTGGGGTTTCCAT‑GATGAGCGAGAGAAATAAGCAA‑‑‑‑C‑A‑‑‑A‑‑‑‑‑‑GCAGTGAATAAATTT‑ACAGAGATTGTCGCTAAA‑TTTACCGCCATG‑ATTTCTACCCCCATGCCTGTTGGCGGGGGGGCTa > 1:1245946/1‑239 (MQ=255) ttATTTTCGCGTTGATTCACGAACTGTTAATTACATTGT‑CACGGTGGAAAAAAATAGAAACCCACATTTGTAGTGGTATTTTGTGGCGGTGAT‑TTTTTCCAGAAAAATAC‑AAAAACTGGGGTTGCCAT‑GATGAGCAAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGACTGATGACGTGGTGGATAAACT‑aaa < 1:359612/239‑1 (MQ=255) tatttactgtttGATTCCCTAACTGTTAATTACATATT‑CGAGGTGGAAAAAAATAGAAAACCATGTTTGTATTGGTGGTTTGGGGCGGAAAA‑TTGTTCCTGAAAAAGAC‑AAAATGTGGACGTTCACT‑GATGAGGGAGAGTAATAAGCAA‑‑‑‑C‑G‑‑‑G‑‑‑‑‑‑ACATTCAAAAGGTTG‑ACAGAGATTGCCGCAAGG‑TTTACCGCCATG‑ATTTCTTCCCGAATGCCTGATGACGTGGTGGATAAACT‑aaca < 2:831787/229‑3 (MQ=255) tATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTTTACACAAATAC‑AAAAAATGGAGTTTGCTT‑TATGAGCGGAAGTAATAAACAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑ACAGAGAAACAGATT‑AAAAAAATTGTAGGTAAA‑TTTTAAGCCATG‑AGTTTTACCCCAATGCCTTGTTACGGGGTGGATAAACC‑aaac > 2:958061/1‑238 (MQ=255) tATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTTCCGACAAAAAC‑AAAAAATTGAGTTTGCCT‑GATGAGAGAAAGTAATAAACAA‑‑‑‑C‑A‑‑‑A‑‑‑‑‑‑ACAGAGAAAAAATTG‑ACAGAGATTGTTGCTAAA‑TTTAACGCCAAG‑ATTTTTACCCCAAAGCCCGATTACGGGGGGGATAAACT‑aaaa > 1:459018/1‑239 (MQ=255) ttttCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑ATTTTTACGAAAAAAAC‑AAAAAATGGAGTTTTCAT‑TGTGGGAGGAAAGAAAAAACAA‑‑‑‑A‑A‑‑‑A‑‑‑‑‑‑GCAGAGAAAAAATTG‑ACAAAGATTGTGGCGTAC‑TTTTTCGCCCTG‑ATTTCTTTCCGAATACCTGATGACGTGGGGGGTATACA‑aaaaaa > 2:582594/1‑237 (MQ=255) gtcagaggtggataagaaacaggTTATTTACATATT‑CGCGGTGGAAAAAAATATAAAACCACATTTTAAGTGTTGGTGTGTGGCGGTGAA‑TTTTACAAGACAAATAC‑AAAAACTGGAGTTTCCAT‑GATGAGCAAAATTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑TTATTAAATAAGTTG‑ACAGAGATTGTCGTAAAT‑TTTACCGCCATG‑ATTTCTACCCTAATGCCTGATGACGTGGTGGATAAACT‑aaaa < 2:660336/215‑1 (MQ=255) gctataatacaagaccttatAATTAAATGTT‑AAGGGTGGAAAAAAAGAAAAAACAACATTTTTAGGGGGAGTTTGTGGCGGTAAT‑TTTTTCAAGACAAAACA‑AAAAACTGGGGTTGCCAT‑GAGGACGAAAAGTAATAACCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCATGGAAAAAGTTG‑ACAGAGTTTGTCTCTAAC‑TTAACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTa < 2:119960/219‑1 (MQ=255) gcgTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTTGA‑TTTTTTCAGACAAAAAA‑AAAAACAGTAGGGTCCTG‑TATTGGGGGAAGTTATAAGCAA‑‑‑‑A‑A‑‑‑A‑‑‑‑‑‑GCAGTGAATAAAATT‑GCAGAAATTGTCGCTAAC‑ATTACCCCCCAG‑AATTCTTCCCAAATGCCTGATTACGCGGTGGATAAATT‑aaaaagagtta > 2:1151044/1‑232 (MQ=255) gcgTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTTCAGACAAAAAA‑AAAAAAAGGAGTTGGCAT‑TATGAGGGGAAGTAATAAGAAA‑‑‑‑C‑A‑‑‑A‑‑‑‑‑‑GCAATGAATAAGATG‑GCAGAGAATGTTGCTAAA‑TTTACCACCCTG‑ATTTCTACCCGAATACATGATGACTGGGGGGGTAAACA‑aaaaaaaataa > 2:1102120/1‑232 (MQ=255) gaattaccGAACTGTTAATTACATATT‑ACGGGTGGAAAAAAATATAAAACCACATTTTTAGTGTTGTTTTGTGGAGGTGAA‑TTTTTACAGACAAATAC‑AAAATCTGGAGTGCCCGT‑GAGGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCGGTGAATAAGTTG‑ACAGAGTTTTTCACTAAC‑TTAACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAg‑g < 2:1280570/231‑1 (MQ=255) tGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTTCAGACAAATAA‑AAAAAATGGAGGTGTCAT‑GATGAGCGAAAGGAATAAATAA‑‑‑‑C‑A‑‑‑A‑‑‑‑‑‑GGAGGGAATAAGATG‑ACAGAGATTTGCGCTAAC‑TTTAACCCCCAG‑ATTTCTACCCGCAAGCCTCATGACGTGGGGGAAAAAAT‑AAAAAAACTaaaaggcggccaaaagt > 1:697927/1‑224 (MQ=255) ttAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAgaga < 1:697647/149‑1 (MQ=255) taaaTTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGGGGCGGTAAA‑TTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGa < 1:263711/202‑1 (MQ=255) aaTAACATATT‑CACGGTGGAAAAAAAAAAAAAACCACATTTTTAGTGGTAGTTTGGGGCGGTGAA‑TTTTACCAGACAAATAA‑AAAAACGGGAGTTGCAAT‑GAGGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGtcgtcg < 2:595367/239‑1 (MQ=255) ttAAATATT‑CAAGGTGTAAAAAAATATAAAACCGCATTTTAAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCAAGACAAATAC‑AAAAACTGGAGTGGCCAT‑GATGAGCAAAAGTAATAACCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GGAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGAt < 1:1068744/239‑1 (MQ=255) atatT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTTCAGAAAAAAAC‑AAAAACTGGAGGTGGCAT‑GATGGGCGAAAGGAAAAAACAA‑‑‑‑A‑A‑‑‑A‑‑‑‑‑‑GCAGTGAAAAAATTG‑AAAGAGAGTGTCGCTAAC‑TTTACCGCCATG‑ATTTTTACCCGCATGGCTGATGACGTGGTGGGGAAACT‑AAAAAACCTAAAG‑GATACCGAAAAGTCCTCGGTgggg > 1:631210/1‑239 (MQ=255) atatT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑ATTTTTCAGACAAAAAC‑AAAAAATTGAGTTTTCAT‑GATGAGCGAAAGTAATAAGAAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGGGAATAAGTTG‑AAAGAGATTGTCGCTAAC‑TTTAACGCCCTG‑ATTTTTACCCCAATGCCTGATGACGTGGTGGGTAAAAT‑AAAAAAGCTAAAG‑GATGACGCAACGCAGGCGATgggg > 1:1388078/1‑239 (MQ=255) atatT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑ATTTTTATAACAAATAA‑AAAAACAGGAGTTGGCAT‑TATGAGGGGAAAAAATAAGAAA‑‑‑‑C‑A‑‑‑A‑‑‑‑‑‑GAAGGGGAAAAGTTT‑AGAGGGAATGTTGCTACA‑TTTATACCCATGAATTATTACCCAAAAGCC‑GGTGTTGTGGGGGATAAAAC‑AAAACAGCTAAAA‑AACTTCGGAAAGTCGTCGACgggg > 2:1019021/1‑239 (MQ=255) atatT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGCGAA‑TTTTTTCAGACAAATAC‑AAAAAAGGGGGGTGCCGT‑GGTGGGCTGGAGTAATAAAAAA‑‑‑‑C‑A‑‑‑C‑‑‑‑‑‑GAAATAACTAAGTTT‑TCTGACATTTGGGCTAAA‑TTTAAATCAATG‑CGTTCTTCCCCAACCCCTGAGTGCGCCGGGGGTAAAAA‑AAAACAGCTAAAGAGTTTCCTGAAC‑TCGTCGATgggg > 2:229326/1‑239 (MQ=255) atatT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGAGAA‑TTTTTTTAGACCAAAAA‑AAAAACTAGAGGTGGCAA‑GAAGAGGGAAAAAAATAAGCAA‑‑‑‑C‑A‑‑‑A‑‑‑‑‑‑GAAGAGAATAAATTG‑TCCGAGAATGTGGCTAAA‑TTTACCTCCATC‑AATTTTTACCGAATGCCTGGTGTCGATGGGGATAAACT‑AAAACAACCAAAA‑Gaatgcgcaaacacgtacacgggg > 2:794496/1‑217 (MQ=255) atatT‑CACGGTGGCAAAAAATATAAAACCACATTTTGAGTGGTAGTTTGTGGCGGTGAT‑TTTTTCCAGAAAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGa < 1:1049051/223‑1 (MQ=255) atatT‑CACGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGAAAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTa < 1:829964/212‑1 (MQ=255) tatT‑CACGTGGGCAAAAAATATAAACCCACATTTTTAGTGGTAGTTGGTGGCGTTAAA‑TTTTTACATACAAATAC‑AAAAACGGGAGTTGCCAT‑GATGAGAGAAAGAAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTAAATAAGTGG‑ACAGAGATTGTCGTTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGa < 1:1403772/239‑1 (MQ=255) tatT‑CACGGTGGAAAAAAATATAAAACCAAATTTTTAGGGGTAGTTTGGGGCGGTAAA‑TTTTTCCAGACAAAAAA‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGAAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTGG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGa < 2:1332086/239‑1 (MQ=255) tatT‑CACGGTGGAAAAAAATATAAAACAACATTTTTAGTGGTAGTTTGGGGGGGTAAA‑TTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCTAT‑GATGAGCAAAAGAAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAT‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGa < 1:344668/239‑1 (MQ=255) attt‑CACGGTGGAAAAAAATATAAAACCCCATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAC‑AAAAATTGGAGTTGCCTT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑G‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGa < 1:1064968/237‑1 (MQ=255) tatccgcGGGGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTAAA‑TTTTTCAAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGAGAAAGTAAAAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTA‑ACAGATATTGCCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGa < 2:251319/233‑1 (MQ=255) atT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGA‑TTTTTTCAGAAAAAAAA‑AAAAAATTGAGTTGGCCT‑GGTGGGTGGAAAAAATAAACAA‑‑‑‑A‑A‑‑‑A‑‑‑‑‑‑ACAAGGGATAAATTG‑GAAGAGATTGTTGCTaa > 2:697647/1‑149 (MQ=255) atT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGA‑TTTTTTCAAACCAAAAC‑AAAAAATGGGGTTTGTTT‑GGTGGGCGCAAGTAATAAACAA‑‑‑‑A‑A‑‑‑G‑‑‑‑‑‑GAAGTGAATAAATTG‑CAAGAGATTTTTGCTAACATTAACCACCA‑G‑ATTTTTACCCGAATGCCTGCTGATGTGGGGGATTAAAT‑AAAAAAGCTTAAG‑GCTACAGaaaactagtgggtggggga > 2:748633/1‑223 (MQ=255) atT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGA‑ATTTTTTAAACAAAAAC‑AAAAACAGGAGGTTGCAT‑GGTGAGCGGAAGTAATAAACAA‑‑‑‑A‑A‑‑‑A‑‑‑‑‑‑AAAAGGGATAAGATGTACA‑AGAATGTGGCTAAA‑TATACCCCCATA‑ATTTTTTACCGAAAGTATGTTGTAGGGGTGGATTAAAC‑AAAACAACTTAAA‑GAGGCCGCAACCGCGTCGGTggggga > 2:91747/1‑237 (MQ=255) atT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTTCAGACAAAAAC‑AAAAAATGGGGGTGCCAT‑GATGGGCGAAAGTAATAAAAAA‑‑‑‑A‑A‑‑‑A‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAA‑TTTACCGCCCTG‑ATTTCTACCCGAATGCCTGATGACGGGGGGGGTAAACT‑AAAAACGCTAAAA‑GAAGCCGAAAAGTCGGTGATggggga > 1:1374632/1‑237 (MQ=255) atT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTTCAAACAAAAAC‑AAAAAAATGAGTTTGCAT‑GGTGAGCGGAAAAAATAAACAA‑‑‑‑C‑A‑‑‑A‑‑‑‑‑‑GCAAGGAATAAATTT‑ACAAAGAATGTCGCCAAC‑TTTACCGCCCTT‑ATTTTTAACCCAATGGCTGATGACGTGGGGGGTAAAAT‑AAAACAACAAAAA‑GATTCCGCAACATCGTCGATggggga > 1:1232761/1‑237 (MQ=255) atT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGAAAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGaa < 1:1151052/239‑1 (MQ=255) atT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑ATTTTTCAAACAAAAAA‑AAAAAATGGAGATGCCAT‑GATGAGCGGAAGTAATAAGAAA‑‑‑‑A‑A‑‑‑A‑‑‑‑‑‑GCAATGAAAAAAATG‑AAAGAGATTGTCGGCAAA‑TTTACCCCCATG‑ATTTTTACCCCAATGCCTGATGAGGGGGGGGGTAAAAT‑AAAAAAGCTAAAG‑Gaaagtctcttttacacatatccgc > 1:660336/1‑215 (MQ=255) aattacgggTGGAAAAAAAAAAAAAACCCCATTTTTAGTGGTAGTTTGTGGCGGTAAA‑TTTTTCCAGACAAAAAC‑AAAACCTGGAGTGGCCAG‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCATTAAATAAGTGG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGa < 1:636384/232‑1 (MQ=255) aCGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGA‑TTTTTTCAAACAAAAAA‑AAAAAATTGAGTTGCCCT‑GATTGGGGGAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAATTG‑ACAGAGATTTTCGCTAAC‑TTTTCCGCCATG‑ATTTTTACCCGAATGCCTGATTACGTGGGGGGTAAAAT‑AAAAAAGATAAAG‑GATGCCGAAAAGTCGGCGATGGGGGAAAtt > 1:1201523/1‑239 (MQ=255) cGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTTCAAACAAAAAA‑AAAAAATTGAGGTGGCCT‑GATTGGGGGAAGTAAAAAACAA‑‑‑‑A‑A‑‑‑A‑‑‑‑‑‑GCAATGAATAAAATT‑ACAGAGAATGTGGCTAAC‑TTTACCCCCAAG‑ATTTTTATCCCGATGGACGAAAACGGGGGGGGTAAAATAAAAACACTTAAAG‑AATCCGGAAACGTGTCCGTGGGGGAAAAta > 2:487241/1‑238 (MQ=255) gagaaaaaaaaaTA‑AAAACCAAATTTTTGTGGGTGGTTTGTGAGGGTGAA‑TTTTTCAAAAAAAATAA‑AAAAACGGGAGTTGCCTG‑GATGAGAAAAATAAAAAAACAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTAAATAGGTTG‑ACAGAGATTGCCGATAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTAt < 2:459018/232‑1 (MQ=255) gTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTAt < 1:958061/238‑1 (MQ=255) tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑ATTTTTCAGACAAAAAC‑AAAAAATGGAGGTGCCAT‑GATGAGGGGAAATAATAAACAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAAAAAGTTG‑GCAGAGAATGTCGCCAAC‑TTTACCGCCATG‑ATTTCTACCCGCATGCCTTATTACGTGGTGGAGAAAAT‑AAAACAACTAAAA‑GATGCCGAAACGtcgtcgcctgccccttatacac > 2:1049051/1‑223 (MQ=255) tGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTAAA‑TTTTCCCAGAAAAATAC‑AAAAACTGGATTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACATCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATc < 1:134290/238‑1 (MQ=255) aaTATAAAACCACATTTTTAGGGGTAGTTTGTGGCGGTAAA‑TTTTTCCAAAAAAAAAC‑AAAAACGGGAGTTGCCAT‑GATGAGCAAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTAAATAAGTTG‑ACAGAGATTGTCGCAAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑g < 2:1201523/239‑1 (MQ=255) aaTAAAAACCCACATTTTGAGTGGGAGTTGGGGGGGGTGAA‑TTTTTCCAAAAAAAAAC‑AAAAAGGGGAGTGGCAAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑G‑‑‑G‑‑‑‑‑‑GCGGTAAATAAGTGG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑g < 1:229326/239‑1 (MQ=255) aaTAAAAAACCACTTTTTTAGGGGTAGTTTGTGGGGGTGAA‑TTTTCCCAGAAAAATAA‑AAAAACTGGAGTTGCAAT‑GATGAGCGAAAGAAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GAATGGAATAAGTTG‑ACAGAGATTGTCGCTAAT‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑g < 1:40417/239‑1 (MQ=255) aaTAAAAAACCACATTTGTAGTGGTAGTGTGTGGCGGTAAT‑TTTTTCAAGAAAAATAC‑AAAAACGGGAGTTGCCAG‑GAGGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAATTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAGCAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑g < 2:1374632/239‑1 (MQ=255) caTTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTTCAGACAAATAC‑AAAAAATGGAGGTGCCAT‑GATGAGCGAAAGAAATAAACAA‑‑‑‑C‑A‑‑‑A‑‑‑‑‑‑GCAGTGAATAAGATG‑ACAGAGATTGTCGCCAAC‑TTTACCGCCCTG‑ATTTTTACCCCAATGCCTGGTGACGTGGTGGGTAAACT‑AAAACAGCTAAAA‑GATGCCCAAACGACGTCGGTGGGGGAAATTATTTACCCTACAGATGTT‑Gacaaa > 1:957057/1‑238 (MQ=255) caTTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTTCACACAAAAAA‑AAAAAATTGAGGTGTCAT‑GGTGAGCGAAAAAAATAAGAAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GGAGTGAATAAAATG‑ACAAAGATTGTCGCCAAC‑TTTTCCg > 1:77967/1‑129 (MQ=255) ggTTTGGGGTGGAAAA‑TTTTACAAAAAAAATAA‑AAAAACGGAAGTTGCCAT‑GATGAGAGAAAGTAATAAGAAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GAAGGGAATAAGTTG‑ACAGAGATTGCCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGa < 2:652970/238‑1 (MQ=255) aGTTTGTGGCGGTAAA‑TTTTTCAAAAAAAATAA‑AAAAACTGGAGTTGCCAT‑GATGGCCGAAAATAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTAAATAAGTTG‑ACAGAGATGGTCGCTACC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGa < 1:1151044/239‑1 (MQ=255) tgGCGGTGAA‑TTTTTCCAGACAAAAAC‑AAAAATTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGCCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGAc < 1:669602/238‑1 (MQ=255) gCGGTAAA‑TTTTCCAAGACAAATAA‑AAAAACTGGAGTTGCCAA‑GATGAGCAAAAGTAATAAGCAAAGGGC‑AAGGG‑‑‑‑‑‑GCAGTGAAAAAGTTG‑ACAGAGATGGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGa < 2:558935/238‑1 (MQ=255) taaa‑TTTTCCCAGAAAAATAA‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAAAAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTGA‑ACAGAGATTGTCGCTACC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAAt < 1:147067/236‑1 (MQ=255) ttaccAAACAAAAAA‑AAAAACTGAGTTTCCCAG‑GAAGAGCAAAAGTAATAAACAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑CGAGGAAATAAGTTG‑AAAGAGTGTGTCGTAAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg < 2:1232761/236‑1 (MQ=255) tAC‑AAAAACTGGAGTTGCCAT‑GATGAGCAAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGaca < 1:475605/239‑1 (MQ=255) taaaaaaaCTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GAAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGaca < 1:642776/236‑1 (MQ=255) aaaaaCGGGATTTGCCAG‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑G‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTGG‑ACAGATTTTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCg < 1:795382/239‑1 (MQ=255) aaaCTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCggg > 2:1250640/1‑239 (MQ=255) accgggAGTTGCAAT‑GATGAGGGAAAGAAAAAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GAAGGAAAAAGGTTG‑AAAGAGATTGCCGCTACC‑TTAACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg < 2:59610/235‑1 (MQ=255) aatgtgAGTTGCCGT‑GAGGAGAGAAAGAAAAAAGCAA‑‑‑‑C‑G‑‑‑G‑‑‑‑‑‑GCAGGTAATAAGTGG‑ACAGAGAGTGGCGCTAAT‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg < 2:212011/234‑1 (MQ=255) aaCTGGGGTTGCAAT‑AAGGAGCAAAAGTAATACGAAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GAAGTAAAAAAGTTG‑ACAGAGTTTGTCGCTAAT‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg < 2:1349641/239‑1 (MQ=255) aaCTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑G‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg < 1:615170/239‑1 (MQ=255) aaCTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑AAAGAGATTGTCGCTAAT‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg < 1:794496/239‑1 (MQ=255) aaCTGGAGTTGCCAT‑GATGAGCGAAAGAAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑AAAGAGTTGGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg < 1:905093/239‑1 (MQ=255) aaCTGGAGTTGCAAT‑GAGGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑AAAGAGATTGTCGCTAAT‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg < 1:582594/239‑1 (MQ=255) aaCTGAAGTTGCCAT‑GATGAGCGAAATTAATAAGAAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GAAGTAAATAAGTTG‑GCAGAGATCGTACCTAAT‑TTAACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg < 1:793625/239‑1 (MQ=255) aCTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGga > 2:931448/1‑239 (MQ=255) gAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑CATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCACAAAGCGATTGACCTGACTCGTCCTGCCTGTCAGGCACCCGCGGAGAtt > 2:570219/1‑239 (MQ=255) cGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAg > 1:545939/1‑239 (MQ=255) cGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTAAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTc < 1:1112121/197‑1 (MQ=255) | TAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCA‑TTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATT‑CACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAA‑TTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCAT‑GATGAGCGAAAGTAATAAGCAA‑‑‑‑C‑A‑‑‑G‑‑‑‑‑‑GCAGTGAATAAGTTG‑ACAGAGATTGTCGCTAAC‑TTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACT‑AAAACAGCTAAAG‑GATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATAC‑GATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAG > NC_000913/3206234‑3206707 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |