New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2290110NA (NA)73 (1.450) 41/280 0.2 96.1% intergenic (‑31/+2) insH1/yejO IS5 transposase and trans‑activator/pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system
?NC_000913 = 3553105 3 (0.060)coding (23/2706 nt) malT mal regulon transcriptional activator

AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2289970‑2290110
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGATGACGTTTTTTTATGT  <  NC_000913/3553105‑3552967
                                                                                                                                                                                                                                                                                        
AAGAAGTTCGCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                                                           <  1:790654/143‑1
AAGAAAATCTCTTTTCTGGTCTTACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                                                           <  1:712165/143‑1
AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATTAGGGACTTGTTCGCACCTTCCT                                                                                                                                           <  2:826648/143‑1
AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTGGCACCATCCT                                                                                                                                           >  1:127010/1‑143
AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                                                           >  1:656907/1‑143
AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                                                           >  2:717042/1‑143
AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCCGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGAGCTTGTTGGCACCTTCCT                                                                                                                                           >  1:436507/1‑143
 agtaatTCTCTTGTGTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT                                                                                                                                          <  1:14463/137‑1
 AGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT                                                                                                                                          <  2:591500/143‑1
  GAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                                                         <  2:742363/143‑1
  GAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                                                         >  2:659251/1‑143
  GAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                                                         >  2:650079/1‑143
  GAAAATCTCTTGTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                                                         <  2:761301/143‑1
   AAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGACTTCACTTTCTGCGAAGGTAAGTTGATGACGCATGATGCCCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAG                                                                                                                                        <  1:625703/143‑1
   AAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAG                                                                                                                                        <  2:796618/143‑1
   AAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAG                                                                                                                                        >  2:640039/1‑143
   AAAAGCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAG                                                                                                                                        <  2:814865/143‑1
         tcgTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTgtt                                                                                                                                  <  2:733918/140‑4
         tcgTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGA                                                                                                                                  <  2:97173/140‑1
         cCTTTTCTGGTTTGACTGCGCTTACTGCTTAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCCTATCATGGAGTTGTTCGCACCTTCCTTAGTTTgtt                                                                                                                                  <  1:727940/142‑4
         TCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGCCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGACCCTTCCTTggcgaagt                                                                                                                                  >  1:552007/1‑135
         TCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTGATATCAGGGGCTTGTTCGCACCTTCCGTAGTTTgtt                                                                                                                                  >  2:471565/1‑140
         TCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTgtt                                                                                                                                  <  1:731059/143‑4
         TCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGCGACTTGTCCGCACCCTCCctcagttaaa                                                                                                                                  >  1:702843/1‑133
         TCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACGGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTgtt                                                                                                                                  <  2:800100/143‑4
          tgttcgTGGTCGGTCGGCGGTTAATGCATAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGTCTTGTTCGCACCTTCCTTAGTTTTGAC                                                                                                                                 <  1:46084/137‑1
           TTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTgttgt                                                                                                                                >  2:345776/1‑138
           TTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGAATTGTTCGCACCTTCCTTAGTTTgttgt                                                                                                                                >  2:438908/1‑138
                TGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATC                                                                                                                           >  2:784095/1‑143
                 cgggTGACGGCGCTGCCTGACGAACGCACGGCCGGCGAAGGTAAGTTGATGACTCATGATGCACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATAGCAGGCACTTGTTCGCACCTTCCATAGTTTTGACGGAATCA                                                                                                                          <  1:498483/139‑1
                   tcggtCGGCGCTTACTGCTTAATTCAGTGTGTGCGAAGGTAATTTGATCACTAATGATGACCCCTGTTCTATGGCTCCAGATTACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAACCAGC                                                                                                                        <  1:769008/138‑1
                   TCTGGCGGCGCTCACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGC                                                                                                                        <  1:875625/143‑1
                   TCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGC                                                                                                                        <  2:552559/143‑1
                    CTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTgttgtgcggtaagt                                                                                                                       <  2:259493/143‑15
                    CTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGGAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTgttgtgcggtaagt                                                                                                                       <  2:571832/143‑15
                     TGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCAT                                                                                                                      <  2:520303/143‑1
                                 CTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTT                                                                                                          <  1:785184/143‑1
                                    CTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCAC                                                                                                       >  1:889109/1‑143
                                         TTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGG                                                                                                  <  2:615079/143‑1
                                            ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAA                                                                                               >  1:688313/1‑143
                                             CTGTCGGCGAAGGTAAGTTGATGCCTCATGATGAACCCTGCTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAA                                                                                              <  1:67894/143‑1
                                                 CGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAG                                                                                          <  2:19736/143‑1
                                                     GAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGCAAATGACGAca                                                                                      >  2:135878/1‑141
                                                     GAAGGTAAGTTGATGACTCATGATGAACACTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACGTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAA                                                                                      >  1:487110/1‑143
                                                                GATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTaaat                                                                           >  2:639255/1‑139
                                                                GATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTT                                                                           <  2:383323/143‑1
                                                                 gTGACTCATTATTCACTCTGTTCTGTGGCTCCAGACGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTT                                                                          <  1:619497/142‑1
                                                                      TCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTGGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGC                                                                     >  2:794673/1‑143
                                                                        ATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTT                                                                   >  2:522906/1‑143
                                                                         TGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTC                                                                  <  2:857448/143‑1
                                                                            TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTGACTGTGGAAAATGAGGAAATGTTATTTTTTTTGCGCGTCGTA                                                               >  2:254978/1‑143
                                                                             gagCCCGGTTCTATGGCTCCAGAAGAAAAACATGATCTCATATCAGGGACTTGTGCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTGTGCGCTTCGTAA                                                              <  2:235106/140‑1
                                                                                CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAAGGACTTGTTAGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGAGCTTCGTAATTA                                                           >  2:267063/1‑143
                                                                                            GCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGG                                               <  2:889109/143‑1
                                                                                              TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTC                                             >  2:427622/1‑143
                                                                                                 AGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTGTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGC                                          <  1:612263/143‑1
                                                                                                  GATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCC                                         >  2:475259/1‑143
                                                                                                      ACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGACCTATTCTTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCACAA                                     >  2:389193/1‑143
                                                                                                            ATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTT                               <  1:370726/143‑1
                                                                                                             TGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTC                              <  2:778148/143‑1
                                                                                                               ATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTA                            >  2:150292/1‑143
                                                                                                               ATCTCAGATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTA                            <  2:70501/143‑1
                                                                                                                 aTCATATCAGGCACTTGTTCGCACCTTCCTTAGTTTTAACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAAT                          <  1:784095/142‑1
                                                                                                                      ATCAGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAG                     <  1:328176/143‑1
                                                                                                                         agcGACTTCGTCGCACCTTCCTTAGTTTTGACTGAATCAGGATAGTTAATCCCTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGA                  <  2:861926/140‑1
                                                                                                                         AGGGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGA                  >  2:79429/1‑143
                                                                                                                          ggtACTTGTGCGAACGTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATGTTTTGGGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGAT                 <  1:468851/140‑1
                                                                                                                           GGACTTGTTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTCCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGATG                >  2:716268/1‑143
                                                                                                                            gacttggtgtctCCTCCCTTAGTTTGGGCGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGATGA               <  2:590829/131‑1
                                                                                                                                  TTCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGATGAagcaac         >  2:782326/1‑137
                                                                                                                                   TCGCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGATGACGTTTTT        <  1:443320/143‑1
                                                                                                                                     GCACCTTCCTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGGACGAGATGACGTTTTTTT      >  1:762354/1‑143
                                                                                                                                         CTTCCTTAGTTTTGACGGAATCAGCATAGTCACCCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGATGACGTTTTTTTATGT  <  2:688313/143‑1
                                                                                                                                         CTTCCTTAGTTCTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGATGACGTTTTTTTATGT  <  2:39619/143‑1
                                                                                                                                                                                                                                                                                        
AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2289970‑2290110
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTAGTTTTGACGGAATCAGCATAGTTAATCACTTCACTGTGGAAAATGAGGAAATATTATTTTTTTTGCGCTTCGTAATTAATGGTTATAAGGTCGGCCAGAAACCTTTCTAATGCAAGCGATGACGTTTTTTTATGT  <  NC_000913/3553105‑3552967

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.