BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2219653 =	NA (NA)	7 (0.150)	6/268	5.8	NA	noncoding (31/34 nt)	REP152 (repetitive extragenic palindromic) element, contains 1 REP sequences	REP152 (repetitive extragenic palindromic) element, contains 1 REP sequences
*	?	NC_000913	= 4094716	NA (NA)	7 (0.150)	6/268	5.8	NA	noncoding (402/402 nt)	REP299 (repetitive extragenic palindromic) element, contains 9 REP sequences	REP299 (repetitive extragenic palindromic) element, contains 9 REP sequences
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 136 total aligned reads displayed.

AACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACGATTTCTGCTCTTCCAGCA  >  NC_000913/4094576‑4094858

aaCTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCCCGCGCCGCATCCGGcgg                                                                                                                                              >  2:153861/1‑141 (MQ=255)

 tctcttcccGACCTGTAGGCCCGATACGGCACTTGTGCCGCATTCGACGACCAATTCCTGACGCGCCGCTGTCGCGTCGTATCAGGCCTACAACTGTTGCCGCCCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAgt                                                                                                                                             <  1:392722/136‑1 (MQ=14)

 aCTATTGCGGACCTGGAGGCCGGATAAGGCACTGGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAgt                                                                                                                                             <  2:700854/143‑1 (MQ=255)

  cTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCCCCGCATCCGGCCgtg                                                                                                                                            >  1:734728/1‑143 (MQ=255)

   tATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAgtgt                                                                                                                                           <  2:238724/143‑1 (MQ=255)

     ttGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGttt                                                                                                                                         <  2:186376/143‑1 (MQ=255)

     ttGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGttt                                                                                                                                         >  2:147956/1‑143 (MQ=255)

      tGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACCGTTGCCGACCCGTACGCCGGATAACGCCCCCGCGCCGCATCCGGccacgtctc                                                                                                                                        >  1:16054/1‑135 (MQ=14)

       gCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGGTAAGGCCCTCGCGCCGCATCCGGccgccagtgc                                                                                                                                       >  1:882921/1‑134 (MQ=11)

       gCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTAc                                                                                                                                       <  2:217604/143‑1 (MQ=255)

          gACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCCCATCCGGCAGTGATTACCcg                                                                                                                                    >  1:525270/1‑143 (MQ=255)

             cTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCCGAAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAgtgaatgcccgagg                                                                                                                                 >  1:143214/1‑132 (MQ=11)

              tGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCgcggc                                                                                                                                <  1:814159/143‑1 (MQ=255)

                caGGCCGGATAAGGCACTTGTGCCGCATCCGGCGATCAAGGCCGGATGCGACGCTGTCGCGTCTTCACGGGCCGGCAACTGTTGCCGCCCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGa                                                                                                                              <  1:313827/142‑1 (MQ=18)

                  tgCCGGATGCGGCACAAGTGCCTTATCCGGCAATCAATGCCTGATGCGACGCCGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTGGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACt                                                                                                                            >  2:106339/2‑143 (MQ=18)

                   gCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACCACTGTTTCCGACACAAAGGCCGGATCAGGCGCTCGCGCCACCTCCGGCAGTGTCTACGCGCCGCGACTc                                                                                                                           >  1:351929/1‑143 (MQ=17)

                   gCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGAccc                                                                                                                           >  2:360420/1‑141 (MQ=255)

                   gCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCATACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTc                                                                                                                           >  2:694227/1‑143 (MQ=255)

                         tAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTATAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtt                                                                                                                     <  2:143214/143‑1 (MQ=255)

                           aGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttc                                                                                                                   <  2:494090/143‑1 (MQ=255)

                           aGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACACAAAAtttc                                                                                                                   >  1:242846/1‑143 (MQ=255)

                            ggCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttct                                                                                                                  <  2:871271/143‑1 (MQ=255)

                            ggCACTTGTGCCGCACCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttct                                                                                                                  <  2:861385/143‑1 (MQ=255)

                            ggCACTTGTAACGAATACGGCAATCTCTACCATTTTCGACGCTGTCGCGTCTTATCAGGCCTACAAGTGTTGCCGACCCGGGCGCCGGAAAAGGCGCTCGCCCCGCTACCGGCAGTGGTTACCCACGGCGGCTCaagcgttct                                                                                                                  >  1:635562/1‑136 (MQ=12)

                             gCACTTGTGCCGCATCCGGCAATCAATGCCTGTTGCGACGCTGTCGCGTCTTATCAAGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGCTTACCCGCGGCGACTccgcatttgct                                                                                                                 >  1:51283/1‑133 (MQ=17)

                             gCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGATCGCGCCGCATCCGGCAGCGGTTACCCGCGGCGACTCaacactccgt                                                                                                                 >  1:603788/1‑135 (MQ=17)

                             gCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGCCGCTCGCGCCGCATCCGGCAGTGTACACCCGCGGCGCATGAAAAttgcta                                                                                                                 >  1:130448/1‑142 (MQ=17)

                              cACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttcttt                                                                                                                <  2:113002/143‑1 (MQ=255)

                              cACTTGTACCCCCTCCTGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttcttt                                                                                                                <  1:343136/143‑1 (MQ=255)

                               aCTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCCCTCGCGCCGCATCCGGCAGTCCTTGCCTGCGGCGACGCagacgggtatga                                                                                                               >  1:759874/1‑132 (MQ=11)

                                 ttGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTtctc                                                                                                             <  1:53345/143‑1 (MQ=255)

                                 ttGGGCGGCATCCGGCAATCAAGGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTtctc                                                                                                             <  1:841702/143‑1 (MQ=255)

                                 gtgtgCCGCATCTGGCTATCGATGCCTGATGCGTCGCTGTCGCGTCTGATCAGGCTTTCAACTATTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTtctc                                                                                                             <  1:426933/142‑1 (MQ=37)

                                     tccGCATCCGGTCATCATTGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTGACCCGCGGCGACTCAAAATTTCTTTCTCATaa                                                                                                         <  1:463653/142‑1 (MQ=255)

                                       cGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTCTCTCCTaacc                                                                                                       >  2:45436/1‑141 (MQ=255)

                                       cGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATCTCTCTCTCATAAGc                                                                                                       >  1:698427/1‑143 (MQ=255)

                                          aTCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTGATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCACAAGTGCTTGCGCATGAGCCCg                                                                                                    >  2:427614/1‑143 (MQ=18)

                                            ccGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCa                                                                                                  <  2:742389/143‑1 (MQ=255)

                                              ggCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATACGGCGCTCGCGCCGCATCCGGCAGTGTTTAACCGCGGCGACTCCAAATTACTTACTCATAAGCCCCCACg                                                                                                >  1:678021/1‑143 (MQ=21)

                                              ggCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGACCGATAAGGCGCTCGCGCCGCATCCGGCAGTGCTTACCCGCGGCGACTCAAAATTTCTTCCTCGTAAACCCGCACg                                                                                                >  1:172680/1‑143 (MQ=21)

                                               gCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATACGGCGCTCGCGCCGCATCCTGCAGTGTTTACCCGCGGCGACTCAAAAGTTCTTTCTAATAAGCCCGCagga                                                                                               >  2:535965/1‑140 (MQ=21)

                                                caatcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGct                                                                                              <  2:262681/143‑1 (MQ=255)

                                                caatcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGct                                                                                              >  1:348820/1‑143 (MQ=255)

                                                 agtcaatGCCTGATGCGACGCTGTCGCGTCTGATATCTGACGGATCTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGctc                                                                                             <  1:183062/141‑1 (MQ=25)

                                                  atcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACGCAAAAGTTCTGTCTCATAAGCCGGCACGctct                                                                                            >  2:263097/1‑143 (MQ=255)

                                                   tcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTCGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGCCTCAAACTTTCTTTCTCACAAGCCCGCACCctccc                                                                                           >  1:611073/1‑141 (MQ=21)

                                                       tGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCCGTGTTTACCCGCGGCGACTCAACATTTCTTTCTCCTAAGCCCGCCCGCTCTCCCGc                                                                                       >  2:377512/1‑143 (MQ=25)

                                                         ccTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCa                                                                                     <  2:301459/143‑1 (MQ=255)

                                                          cTGATGGGCCGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCAt                                                                                    <  1:81247/143‑1 (MQ=255)

                                                          cTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACGCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCAt                                                                                    >  2:850092/1‑143 (MQ=255)

                                                          aagacgcgacagcgTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCAt                                                                                    >  2:564343/14‑143 (MQ=255)

                                                             aTGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCACACTTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCg                                                                                 >  1:116979/1‑143 (MQ=255)

                                                             aTGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCg                                                                                 >  2:320096/1‑143 (MQ=255)

                                                             aTGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCg                                                                                 <  2:593367/143‑1 (MQ=255)

                                                              cgcgcCGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGc                                                                                <  1:381704/142‑1 (MQ=255)

                                                               gCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTCGGCCGGATAAGGAGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCCAACTTTCTTTCTCATAAGCCCGCCAGCTCCCCAGCCAATCCCt                                                                               >  1:205802/1‑143 (MQ=25)

                                                               gCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCt                                                                               >  1:169889/1‑143 (MQ=255)

                                                                    gCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGATCGCGCCGCATACGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCAGCACGCTCTCCAGCCATTCGCTACatg                                                                          >  2:147509/1‑143 (MQ=255)

                                                                       gTCGCGTCCTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACctgctg                                                                       <  1:561427/143‑1 (MQ=255)

                                                                            gccTTATGAGGCCTACCCCTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTa                                                                  <  1:854612/141‑1 (MQ=255)

                                                                            gTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTa                                                                  >  2:193937/1‑143 (MQ=255)

                                                                             tCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTAt                                                                 >  2:6283/1‑143 (MQ=255)

                                                                                tATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCCTCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCCCTCCAGCCATTCGCTCCCTGCCGGccgaccgc                                                              >  1:120270/1‑136 (MQ=38)

                                                                                  tCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGa                                                            <  1:507299/143‑1 (MQ=255)

                                                                                  tCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGAGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTAACCTGa                                                            >  2:3583/1‑143 (MQ=255)

                                                                                   cAGGCCTTCAACTGTAGCCGACCCGGAGGCCGGATAAGGCGCGCGCGCAGCATCCGGCAGTGTTGACCCGCGGCGACTCAAAATTGCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGAc                                                           <  2:296883/143‑1 (MQ=255)

                                                                                    aGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACg                                                          <  2:128940/143‑1 (MQ=255)

                                                                                      gCCTACAACTGTTGCCGACCCGTAGGCCTGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGtt                                                        >  1:317083/1‑143 (MQ=255)

                                                                                      gCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGTCTCAAAATTTCTTTCTCATATGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGtt                                                        <  1:64356/143‑1 (MQ=255)

                                                                                      gCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGtt                                                        <  2:457558/143‑1 (MQ=255)

                                                                                        cTACAACTGTTGCTGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTgg                                                      <  2:479108/143‑1 (MQ=255)

                                                                                        cTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTgg                                                      <  2:516177/143‑1 (MQ=255)

                                                                                        cTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTgg                                                      <  2:16054/143‑1 (MQ=255)

                                                                                           cAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCCCTCCGGCCATTCGCCACCTGCTGGCGCATCGTGGCGTTGGCac                                                   >  2:843980/1‑142 (MQ=38)

                                                                                            aaCTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAAt                                                  >  2:264573/1‑143 (MQ=255)

                                                                                              cTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGCCTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCAATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATAc                                                >  2:485007/1‑143 (MQ=255)

                                                                                               tGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCactgta                                               >  2:215037/1‑138 (MQ=255)

                                                                                                gTTGCCGACGCGCAGGCCAGATAAGGCGCTCGCGCCGCAGCCGGCAGTGTTTACCCGCGGCGACTCAACAGTCCTTGCGCATAAGCCCGGACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACAt                                              <  2:123669/143‑1 (MQ=255)

                                                                                                 ttGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTCGGccaggcatt                                             >  2:684962/1‑135 (MQ=255)

                                                                                                  tGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGCGTTTACAATGCACGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACAttt                                            <  2:408454/143‑1 (MQ=38)

                                                                                                   gCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTc                                           <  1:286065/143‑1 (MQ=255)

                                                                                                    ccGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAAGACATTTcc                                          >  2:232380/1‑143 (MQ=255)

                                                                                                         ccGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGAc                                     >  2:715849/1‑143 (MQ=255)

                                                                                                          cGTAGGCCGGCTAATGCTCGCTCGCCGCACCCGCCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGAcc                                    <  1:527117/143‑1 (MQ=255)

                                                                                                            tAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCACCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCACTACATCTCCCACAcccc                                  >  2:217422/1‑141 (MQ=255)

                                                                                                                 cggaccgggCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGcc                             <  1:742959/136‑1 (MQ=255)

                                                                                                                   gATAAGGCTCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGCCTCAAAATTTCTTTCTCATAAGCCCCCACGCCCCCCAGCCATTCGCCACCTGCTACCCTAGCCTGACGTTGGCAATACATTACCCAGACCGCCTGCCAc                           >  2:612718/1‑143 (MQ=255)

                                                                                                                    aTAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAACATTTCTTTCTCATAAGCCCGCACGCTCTCCAACCATTCGCTACCTGCTGGCGTATCCTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACg                          >  2:446926/1‑143 (MQ=255)

                                                                                                                     tAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTATCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACgg                         >  2:93908/1‑143 (MQ=255)

                                                                                                                          tccTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACg                    <  1:702543/141‑1 (MQ=255)

                                                                                                                           gcTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCCGCCATTCGCTACCTGCTGGCGATCCGTGAGGTTGGCAATACATTTCCCAGCCCGCCTGCCACGGCAACGa                   >  2:165493/1‑143 (MQ=255)

                                                                                                                               gcgcCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACGATTTc               <  2:759874/143‑1 (MQ=255)

                                                                                                                               gcgcCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACGATTTc               <  2:151371/143‑1 (MQ=255)

                                                                                                                                ggccgcATCCCGCAGTGTTTCCCCGCGGCGCCTTAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACGATTTCt              <  1:888367/142‑1 (MQ=255)

                                                                                                                                 gccgcATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACGATTTCTg             <  2:525270/143‑1 (MQ=255)

                                                                                                                                 gccgcATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACGATTTCTg             <  1:465239/143‑1 (MQ=255)

                                                                                                                                 gccgcATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACGATTTCTg             >  2:711851/1‑143 (MQ=255)

                                                                                                                                       tCCGGCAGTGCTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACGATTTCTGCTCTTc       <  1:461268/143‑1 (MQ=255)

                                                                                                                                        ccGGCGGTGCTTACCCGCGGCGACTCAAAATTTCTTTCTCATCAGCCCGCACTCTCTCCAGCCATGCGCTACCTGCTGGCGTATCGTGACGTTGTCAATAGATTTCTCAGACCGCCTGCCACGGCAACGATTTCTGCTCTTcc      <  1:270327/143‑1 (MQ=255)

                                                                                                                                            cAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCGCGGCACCGATTTCTGCTCTTCcagca  >  2:103747/1‑143 (MQ=255)

AACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGCGTATCGTGACGTTGGCAATACATTTCCCAGACCGCCTGCCACGGCAACGATTTCTGCTCTTCCAGCA  >  NC_000913/4094576‑4094858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.