Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 257,908 Δ776 bp [crl] [crl]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 257908–258675 258683 9–776 70 [0] [0] 70 [crl] [crl]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2579070 (0.000)67 (1.220) 52/268 0.0 100% intergenic (+8/‑769) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913 258684 = 0 (0.000)pseudogene (9/331 nt) crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers

TGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCC  >  NC_000913/257766‑258047
                                                                                                                                             |                                                                                                                                            
tgtTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAGATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAa                                                                                                                                             <  2:656533‑M1/143‑2 (MQ=255)
tgtTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAa                                                                                                                                             <  2:675513‑M1/143‑2 (MQ=255)
   tAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtg                                                                                                                                          >  1:256133‑M1/1‑139 (MQ=255)
     aaaaTTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgca                                                                                                                                        <  2:45073‑M1/143‑7 (MQ=255)
      aaaTTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCAGGATATTCGTGAAGGTAagtgcaa                                                                                                                                       >  1:628469‑M1/1‑136 (MQ=255)
              tAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGCAGCGCTGATTTTGTTAAACATTTACGGCACTAGGCGCGTATAGTCGTGCAGGTAagtgcaaagataatc                                                                                                                               >  2:375762‑M1/1‑128 (MQ=255)
              tAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatc                                                                                                                               >  2:777917‑M1/1‑128 (MQ=255)
              tAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatc                                                                                                                               >  1:318202‑M1/1‑128 (MQ=255)
               aaaTTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAGGAGCAGATTGATCAAAAAATTTACCGGACTAGGCCCGTATATTCGTGAAGGTAagtgcaacgataatcg                                                                                                                              >  2:549993‑M1/1‑127 (MQ=255)
               aaaTTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACCTTACCGAGTGGACACCCGAAGAGCAGATTGATCCAAAAATTTACCGCACTAGGCCCCTATATTCGTTAAGGTAagagcaaaaataatcg                                                                                                                              >  2:432436‑M1/1‑127 (MQ=255)
                  ttttGCCAATTTGGTATAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgatt                                                                                                                           <  2:250167‑M1/143‑20 (MQ=255)
                   tttGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattc                                                                                                                          <  2:830005‑M1/143‑21 (MQ=255)
                   tttGCAAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattc                                                                                                                          <  2:369713‑M1/143‑21 (MQ=255)
                        cAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattcttttt                                                                                                                     <  2:884219‑M1/143‑26 (MQ=255)
                        cAATTCGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATGCTCCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattcttttt                                                                                                                     <  2:469332‑M1/143‑26 (MQ=255)
                         aaTTTTGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttc                                                                                                                    <  1:632857‑M1/143‑27 (MQ=255)
                         aaTTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGGAagtgcaaagataatcgattctttttc                                                                                                                    >  2:288582‑M1/1‑117 (MQ=255)
                          tgtttgtaaaaCAGTCGCATCCCAACAGGAGATCGCAATGACGTTACCGAGTGGACACCCCAAGAGCAGATTGATCAAAAAATGTACCGCCCTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcg                                                                                                                   <  1:799152‑M1/138‑28 (MQ=255)
                          aTTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcg                                                                                                                   <  2:789352‑M1/143‑28 (MQ=255)
                           tctggTAAAACAGCTGCACCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcga                                                                                                                  <  2:76766‑M1/141‑29 (MQ=255)
                             tGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgatt                                                                                                                <  1:143394‑M1/143‑31 (MQ=255)
                                tAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGACGGTAagtgcaaagataatcgcttctctttcgattgtc                                                                                                             >  1:1013811‑M1/1‑110 (MQ=255)
                                tAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtc                                                                                                             <  2:40363‑M1/143‑34 (MQ=255)
                                    aCAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggc                                                                                                         <  2:105871‑M1/143‑38 (MQ=255)
                                    aCAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGCGGACACCCGAAGAGCAGAGTGATCAAAAAATTTACCGCACCCGGCCCGTAAATTCGGGAAGGAAagtgcaaagataatcgcgtcctgttcgattggctggc                                                                                                         >  1:693860‑M1/1‑106 (MQ=255)
                                     ccgttGCATCACAATAGGAGATAGCAATGACCTTACCTAGTCGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggct                                                                                                        <  1:351181‑M1/141‑39 (MQ=255)
                                           cATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAGTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgc                                                                                                  <  1:185598‑M1/143‑45 (MQ=255)
                                               gcaacagGAGATGGCGATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtca                                                                                              <  1:50768‑M1/142‑49 (MQ=255)
                                                      gagaTTGCAATGACTATACCGAGGGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaa                                                                                       <  2:133865‑M1/143‑56 (MQ=255)
                                                             cactgacGTTTCCGAGGGGACACCCGAAGGGCAGATTGATCAACAAATATTCCGCATGAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggca                                                                                <  1:878070‑M1/140‑63 (MQ=255)
                                                             cAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgacaccggca                                                                                >  1:218818‑M1/1‑81 (MQ=255)
                                                              aaggacgTTACCGTGTGGACAGCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcac                                                                               <  1:665449‑M1/140‑64 (MQ=255)
                                                                   cGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaa                                                                          <  2:814183‑M1/143‑69 (MQ=255)
                                                                   cGTGACGGAGGGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCGGTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaa                                                                          <  2:790575‑M1/143‑69 (MQ=255)
                                                                    tttgccgagaGGACACCCGAAGGGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaag                                                                         <  2:898622‑M1/139‑70 (MQ=255)
                                                                        ccGAGTGGACACCCGAAGAGCAGATTGACCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcg                                                                     <  2:13260‑M1/143‑74 (MQ=255)
                                                                         cGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTCTATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgt                                                                    >  1:516929‑M1/1‑69 (MQ=255)
                                                                                acacCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGGGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcgacgtgaaaccggcaccggaagtgcgtgaattct                                                             >  2:828942‑M1/1‑62 (MQ=255)
                                                                                 cacCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctg                                                            <  2:933329‑M1/143‑83 (MQ=255)
                                                                                 cacCCGAAGAGAAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctg                                                            <  2:869625‑M1/143‑83 (MQ=255)
                                                                                  acCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctgg                                                           <  2:560699‑M1/143‑84 (MQ=255)
                                                                                  aagagtctagtacgttgatcaaaaaatgtgCCGCGCTGGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattcgttttcgagtgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctgg                                                           <  1:239785‑M1/129‑84 (MQ=255)
                                                                                   ccgtacgagcagattGATCAAAAAATTTACCTCACTAGGCTCGTATATTCGTGAAGGTAagtgcaaagataatcgtttctttttcgattgtctggctgtatgcgtcaacgtgtaaccggcaccggaagtgcgtgaattctggg                                                          <  1:85946‑M1/137‑85 (MQ=255)
                                                                                   cccGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggg                                                          <  1:487985‑M1/143‑85 (MQ=255)
                                                                                    ccGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctgggg                                                         >  1:619225‑M1/1‑58 (MQ=255)
                                                                                    ccGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctgggg                                                         <  1:570118‑M1/143‑86 (MQ=255)
                                                                                     cGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggcagtgcgtgaattctggggc                                                        >  1:930272‑M1/1‑57 (MQ=255)
                                                                                      gAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgcttgtctggctgtatgcgtcaccgtgacaccggcaccggaagtgcgaaaaaacagaggat                                                       >  2:247888‑M1/1‑56 (MQ=255)
                                                                                        agagCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccgacaccggaagtgcgtgaattatggggctgg                                                     >  2:834298‑M1/1‑54 (MQ=255)
                                                                                          cgcAGAGTGGTCAAAAAATTTACCGCACTGGGCCCGGATATTCGTGAAGGTAagtgcaaagataatcgattcttgtgcgattgtctggctgtatgcgtcaacgtgagaccggcaccggaagtgcgtgaattctggggctggtg                                                   <  1:84515‑M1/142‑92 (MQ=255)
                                                                                          agCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtg                                                   <  2:747695‑M1/143‑92 (MQ=255)
                                                                                           gCAGATTGATCAAAAAATTGACCGCGCTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtgg                                                  <  2:87096‑M1/143‑93 (MQ=255)
                                                                                               aTTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatgg                                              <  2:701844‑M1/143‑97 (MQ=255)
                                                                                                     cAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctgg                                        >  2:580205‑M1/1‑41 (MQ=255)
                                                                                                      aaaaaaTTTACCGCACTAGGCCCGTATATTCGTGACGGTAagtgcaaagataatcgattctttttcgattgtacggctgcatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggc                                       >  2:331428‑M1/1‑40 (MQ=255)
                                                                                                      aaaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctgga                                       <  2:256133‑M1/143‑104 (MQ=255)
                                                                                                      aaaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctgga                                       >  1:741796‑M1/1‑40 (MQ=255)
                                                                                                          aaTGTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctgtggctggtggatggagctggaagcg                                   <  2:449330‑M1/143‑108 (MQ=255)
                                                                                                            ttttCCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgagtctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgca                                 <  2:106973‑M1/143‑110 (MQ=255)
                                                                                                              tACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcagg                               <  2:318202‑M1/143‑112 (MQ=255)
                                                                                                                       agtcccgtaTATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgtt                      <  2:506048‑M1/140‑121 (MQ=255)
                                                                                                                       aGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgtt                      <  2:596138‑M1/143‑121 (MQ=255)
                                                                                                                        ggCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttt                     <  2:619225‑M1/143‑122 (MQ=255)
                                                                                                                           ccGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtaaattctggggctggtggatggagctggaagcgcaggaatcccgttttac                  >  2:392473‑M1/1‑19 (MQ=255)
                                                                                                                              tataTTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttaccta               <  2:402455‑M1/143‑128 (MQ=255)
                                                                                                                                gtttcgTGAAGGTAcgggcaaagataatcgattctgtttcgattgtcgggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctaca             <  1:695559‑M1/141‑130 (MQ=255)
                                                                                                                                     gTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggcatcccgttttacctacagttac        >  2:360321‑M1/1‑9 (MQ=255)
                                                                                                                                        aaGGTAagtgcaaatataatcgtgtctttttcgattgttgggctgtatgcggcaacgggaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccag     <  2:222361‑M1/143‑138 (MQ=255)
                                                                                                                                           gTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtgggtggcgctggacgcgccgggatcccgttttacctgcagtttccgattt  >  2:437048‑M1/1‑3 (MQ=255)
                                                                                                                                           gTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagttt  >  2:527941‑M1/1‑3 (MQ=255)
                                                                                                                                             |                                                                                                                                            
TGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCC  >  NC_000913/257766‑258047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.