Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,299,499	Δ1,199 bp	intergenic (+254/‑485)	ychE → / → oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1299499–1300697	1300697	1–1199	83 [0]	[0] 83	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1299498	0 (0.000)	82 (1.440)	63/276	0.0	100%	intergenic (+253/‑1684)	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
	?	NC_000913	1300698 =	0 (0.000)					intergenic (+1453/‑484)	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

AACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGG  >  NC_000913/1300559‑1300839                                                                                                                                            |                                                                                                                                              tacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcatttggtagaggaaagtgctaaataa                                                                                                                                            >  1:294555‑M2/140‑143 (MQ=255)     gttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataat                                                                                                                                        <  2:911881‑M2/8‑1 (MQ=255)         gttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAt                                                                                                                                    <  1:129457‑M2/12‑1 (MQ=255)          ttgtaaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAtt                                                                                                                                   <  1:388773‑M2/13‑1 (MQ=255)          ttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgtgcttgctgaagaataattgaaatgatattattaatgccactgcctttggtagaggaaagtgctaaATAATAATCAAtt                                                                                                                                   <  2:457451‑M2/13‑1 (MQ=255)             taaggatttccttaaatgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGtt                                                                                                                                >  1:373563‑M2/128‑143 (MQ=255)             taaggatttcattaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGtt                                                                                                                                >  2:1014632‑M2/128‑143 (MQ=255)               aggatttcctgaacggcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaattatattaggaattacactgcttttggtagaggaaagtgctaaATAATAATCAATTGTTaa                                                                                                                              <  1:215003‑M2/18‑1 (MQ=255)               aagatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTaa                                                                                                                              <  2:254754‑M2/18‑1 (MQ=255)                     tccttaactgcttctcctctccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattatt                                                                                                                        <  2:889055‑M2/24‑1 (MQ=255)                     tccctaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattatt                                                                                                                        <  1:12076‑M2/24‑1 (MQ=255)                       cttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTCTtgt                                                                                                                      >  1:1008253‑M2/118‑143 (MQ=255)                             tgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAttt                                                                                                                >  1:187872‑M2/112‑143 (MQ=255)                               cttctcctcaccatcatgttcttttcgtcacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCa                                                                                                              <  1:929831‑M2/34‑1 (MQ=255)                                ttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctggagaataattgaaatgatattattaattccactgcctttggtagatgaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTCCac                                                                                                             >  2:564885‑M2/109‑143 (MQ=255)                                  ctcctcaccatcatgttattttcgccacatcataatccggggcttgaactaggattatttaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCacta                                                                                                           <  2:737834‑M2/37‑1 (MQ=255)                                  ctcctcaccatcatgttatcttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagacgaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCacta                                                                                                           <  2:2197‑M2/37‑1 (MQ=255)                                   tcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaCTAATAATCAATTGTTAAATTATTGTGCATTTAactac                                                                                                          >  1:93796‑M2/106‑143 (MQ=255)                                   tcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCactac                                                                                                          >  1:753872‑M2/106‑143 (MQ=255)                                      tctccatcatattattttcgccacatcataatcctgggcttgcttaataataattgaaatgatattattaattccacttcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTgg                                                                                                       <  1:660818‑M2/41‑1 (MQ=255)                                      tcaccatcattttattttcgccacatcataatcctagtcttgctgaagaataattgaaatgatattattaattccactgcctttggtagatgaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTgg                                                                                                       <  1:660815‑M2/41‑1 (MQ=255)                                       caccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGa                                                                                                      <  1:1001012‑M2/42‑1 (MQ=255)                                        accatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGaa                                                                                                     <  2:545932‑M2/43‑1 (MQ=255)                                        accatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGaa                                                                                                     <  2:163289‑M2/43‑1 (MQ=255)                                          catcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                                                                                                   <  2:468941‑M2/45‑1 (MQ=255)                                            tcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGt                                                                                                 >  2:366982‑M2/97‑143 (MQ=255)                                            tcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGt                                                                                                 >  2:300916‑M2/97‑143 (MQ=255)                                              atgttattttcgccacatcataagcctgggctggctgaagaataattgaaattatattattaattccactgcctttggtagaggaaagtgctaaATAACAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTaa                                                                                               <  2:978639‑M2/49‑1 (MQ=255)                                              acgttattttcgctacatcataatcctgggctagctgaagaataattgaaatgatattattaattccactgccgttggtagaggaaagtgctaaATAATAATCAATTGTTAAAGTATTGTGCATTTCACTACTGGAACTGTaa                                                                                               <  2:393494‑M2/49‑1 (MQ=255)                                               tgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggagagtgctaaATAATAATCAATTGTTAAATTATTGTGAATTTAACTACTGGAAGTGTAAt                                                                                              >  1:138534‑M2/94‑143 (MQ=255)                                                 ttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTATAATCa                                                                                            >  1:261219‑M2/92‑143 (MQ=255)                                                   attttcgccacatcataatcctgggcttgctgaagaataattgaaatgctattattaattccactgcctttggtagaggaaagtgctcaATAATAATCAATTGTTAAATTATTGTCCATTTCACTACTGGCACTGTAATCCGa                                                                                          >  2:933789‑M2/90‑143 (MQ=255)                                                      ttcgtcagatcataatcctgggcgtgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaaa                                                                                       <  2:845603‑M2/57‑1 (MQ=255)                                                      ttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaaa                                                                                       <  2:77895‑M2/57‑1 (MQ=255)                                                      ttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaagtccactgcatttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATCTCACTACTGGGACTGTAATCggaacg                                                                                       >  1:65217‑M2/87‑141 (MQ=255)                                                       tcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTATGCATTTAACTACTGGAACAGTAATCAGAAAAg                                                                                      >  1:833622‑M2/86‑143 (MQ=255)                                                          ccacatcataatcctgggcttgctgaagaatgattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAACTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATa                                                                                   <  1:985963‑M2/61‑1 (MQ=255)                                                          ccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATa                                                                                   <  1:584185‑M2/61‑1 (MQ=255)                                                            acatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTATATTATTGTGCATTTGCCTACTGGACCTGTAATCAGAAAAGATagt                                                                                 >  2:374220‑M2/81‑142 (MQ=255)                                                            acatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGa                                                                                 <  2:862695‑M2/63‑1 (MQ=255)                                                                cataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATg                                                                             >  1:579872‑M2/77‑143 (MQ=255)                                                                 ataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGc                                                                            >  2:382663‑M2/76‑143 (MQ=255)                                                                   aatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCtt                                                                          >  2:625718‑M2/74‑143 (MQ=255)                                                                    atcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTa                                                                         <  2:343343‑M2/71‑1 (MQ=255)                                                                     tcttgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTAATGGAACTGTAATCAGAAAAGATAGACATGCTTAg                                                                        <  1:20116‑M2/72‑1 (MQ=255)                                                                              tgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCAAatctcc                                                               >  2:399688‑M2/63‑142 (MQ=255)                                                                               gctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTa                                                              <  2:222201‑M2/82‑1 (MQ=255)                                                                                ctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAt                                                             <  2:849295‑M2/83‑1 (MQ=255)                                                                                 tgaagaataattgaaatgatattattaattccactgcctttggtaggggaaagtgctaaTTAATAATCAATTGTTAAATTATTGTGCATTTGACTAATGGCACTGTAATCAGAAAAGATAGACATGCATAGCCAATATCAAtt                                                            >  1:313576‑M2/60‑143 (MQ=255)                                                                                      aataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgatt                                                       >  1:119621‑M2/55‑143 (MQ=255)                                                                                      aataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgatt                                                       >  2:863099‑M2/55‑143 (MQ=255)                                                                                           ttgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgactt                                                  >  2:839586‑M2/50‑143 (MQ=255)                                                                                            tgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgacttg                                                 >  2:428678‑M2/49‑143 (MQ=255)                                                                                               aatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGaaa                                              <  1:981029‑M2/98‑1 (MQ=255)                                                                                                  gatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCCCTACTGGAACTGTAATCCGAAAAGATAGACATACTCAGCCAATATCTATTTGAATGAATTGAAAGAt                                           >  2:532884‑M2/43‑143 (MQ=255)                                                                                                   acattattaattccactggctttagtagaggaaagtgctaaATAATAATCAATTGGTAAATGATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtg                                          <  2:944122‑M2/102‑1 (MQ=255)                                                                                                      ttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgttt                                       >  1:700108‑M2/39‑143 (MQ=255)                                                                                                      ttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgttt                                       <  2:198180‑M2/105‑1 (MQ=255)                                                                                                      ttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATGTGAGTGAGTTGAAAGatgttg                                       >  2:493475‑M2/39‑142 (MQ=255)                                                                                                         ttaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgtttgtt                                    >  2:947374‑M2/36‑143 (MQ=255)                                                                                                           aattccactgcctttggtagaggaaagttctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTaa                                  <  2:982412‑M2/110‑1 (MQ=255)                                                                                                           aattccactgccttcggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTaa                                  <  2:286397‑M2/110‑1 (MQ=255)                                                                                                            attccactgcctttggtagagtaaagtgctaaATAATAATCAATTGTTAAATTATTGTGGATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAg                                 <  1:503633‑M2/111‑1 (MQ=255)                                                                                                            attccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAg                                 >  1:997768‑M2/33‑143 (MQ=255)                                                                                                            attccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAg                                 <  2:751132‑M2/111‑1 (MQ=255)                                                                                                             ttccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAgg                                >  2:377632‑M2/32‑143 (MQ=255)                                                                                                              cccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGc                               <  2:950818‑M2/113‑1 (MQ=255)                                                                                                                  cggcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATgg                           <  2:178180‑M2/117‑1 (MQ=255)                                                                                                                    gcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGAt                         <  2:753872‑M2/119‑1 (MQ=255)                                                                                                                     cctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATg                        >  1:808673‑M2/24‑143 (MQ=255)                                                                                                                         tggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAg                    >  1:108627‑M2/20‑143 (MQ=255)                                                                                                                          ggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAGCTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGc                   <  2:764255‑M2/125‑1 (MQ=255)                                                                                                                            gagaggagagtgctaaACAATAATCAATTGTTAAATTAGTGTGCGTTTCGCTACTGGAACTGTAATCAGAAAAGATAGACAGGCTTAGCCAATCGCTATGTGATGGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCta                 <  1:169309‑M2/127‑1 (MQ=255)                                                                                                                             agaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCtat                <  2:100950‑M2/128‑1 (MQ=255)                                                                                                                             agaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCtat                <  2:119621‑M2/128‑1 (MQ=255)                                                                                                                              gaggaaagtgctaaATAATAATCAATTGTTGTGTGAGTGTCCAATTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCtata               <  1:444479‑M2/129‑1 (MQ=255)                                                                                                                              gaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCtata               >  2:727303‑M2/15‑143 (MQ=255)                                                                                                                              gaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAAGTTTGTTAAGGCATGGATGCAAGCtata               >  1:141178‑M2/15‑143 (MQ=255)                                                                                                                                ggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGa             <  2:147628‑M2/131‑1 (MQ=255)                                                                                                                                    agtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCt         <  1:947374‑M2/135‑1 (MQ=255)                                                                                                                                      tgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGTTAGAAGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGa       >  1:209802‑M2/7‑143 (MQ=255)                                                                                                                                      tgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGa       >  2:678144‑M2/7‑143 (MQ=255)                                                                                                                                           aATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCACGGATACAAGCTATAGATTATGATACgg  >  1:122356‑M2/2‑143 (MQ=255)                                                                                                                                            |                                                                                                                                              AACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGG  >  NC_000913/1300559‑1300839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑