Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,153,890 T→C 12.6% Y110Y (TAT→TAC)  yghB → general envelope maintenance protein, DedA family inner membrane protein, putative multidrug efflux transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,153,8900TC12.6% 344.5 / 2.5 123Y110Y (TAT→TAC) yghBgeneral envelope maintenance protein, DedA family inner membrane protein, putative multidrug efflux transporter
Reads supporting (aligned to +/- strand):  ref base T (64/37);  new base C (2/17);  total (67/56)
Fisher's exact test for biased strand distribution p-value = 2.14e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 123 total aligned reads displayed.

CATGTTTGCCACGCTGTTTTTAGAAAACGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCA‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGAAGATCAGGTA  >  NC_000913/3153653‑3154124
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                               
cATGTTTGCCACGCTGTTTTTAGAAAACGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCA‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑c                                                                                                                                                                                                                                               >  1:591996/1‑239 (MQ=255)
  gtataagagacaggTTTTTAGAAAACGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCA‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑Ca                                                                                                                                                                                                                                              >  1:701937/14‑238 (MQ=255)
       gCCACGTTGTTTTTAGAAAACGGCCTGCTCCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCG‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAgcg                                                                                                                                                                                                                                        <  2:490076/239‑1 (MQ=255)
       gCCACCCTGTTGTTAGAAAGCGGCGGGATTCCCGCTTCATTTTTGCCAGGCGACAGCTTGTTGATCCTGGCAGGCTCATTGATTGCCCG‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAgcg                                                                                                                                                                                                                                        <  1:258433/239‑1 (MQ=255)
         cACGCTGTTTTTAGAAAACGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCA‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCGGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGTCAAATAT‑CACCAgacc                                                                                                                                                                                                                                       >  2:234769/1‑235 (MQ=255)
          aCGCTGTTTTTAGAAAACGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCA‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAgcg‑cgc                                                                                                                                                                                                                                    <  1:1210988/239‑1 (MQ=255)
                          aCGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCA‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCCGCA‑TGTTTGa                                                                                                                                                                                                                    >  2:357979/1‑238 (MQ=255)
                          aCGGCCTGCTGCCCGCCTCATTTTTCCCAGGCGACCGCTTGTTGATACTGGCAGGCGCCTTTATTGTCCA‑GGGGGTTATGGATTTTCTGCCTACGGTTGGCATTCTGA‑CCGCTGCAGCCAGCATGGGGTGTCGGCTACGGTATATTCAGGTGCGCTG‑GTTAGGG‑AATACA‑AAAA‑CGGTGAAA‑AGAT‑AGCAGGCA‑CCGCTTCCTGCTAAATAC‑TACCAGCG‑CGCCACTTTCA‑TGttgta                                                                                                                                                                                                                    >  2:1014990/1‑235 (MQ=255)
                               ctgcgccccGCGTCATTTTGCCCGGCCGCAAGTTTGTTGATACTGGCGGCCGCATTGATTGCCCG‑GGGGTTTAGGGTTTTTCTGCCTACGATTGCGTTTCGGC‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCa                                                                                                                                                                                                              <  2:1050453/233‑1 (MQ=255)
                                 gctgcCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCA‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCC‑TGTTTGACCGCCACg                                                                                                                                                                                                            >  1:826587/1‑239 (MQ=255)
                                        gCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCA‑GGGGGTTATGGCTTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTGTGGCCCTCTTGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑AGCT‑GGCTGGCA‑CAGCTGCCTTCTAAATCA‑CAccc                                                                                                                                                                                                                                           >  1:79505/1‑202 (MQ=255)
                                                         cGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCA‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGAc                                                                                                                                                                                    >  2:235787/1‑239 (MQ=255)
                                                                    ggactgtGGGAGGGGCAGTGATTGCCCG‑GGGGTTTATGGATTTTCTGCTTACGAGGGGGATTCGGA‑CCGCCGCAGAAAGTCTGGGCTGCGGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAC‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCa                                                                                                                                                                         <  2:817307/233‑1 (MQ=255)
                                                                     gtcagaggtgtaaaagagacgggCCCG‑GGGGGTTATGGATTTTCTGCCTACGTTTGCGTTTCTGA‑CCGCCGCAGCAAGTCGGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCa                                                                                                                                                                         <  2:509438/216‑1 (MQ=255)
                                                                         cTGGCAGGCGCATTGAGTGCCCA‑AGGGGTTAAGGATTTTCTGCCTAAGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCCGGCTAAGTTAGATTCAGGGGGGCTG‑GTTAAGG‑AATACC‑AAAA‑CGCCGAAA‑AGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAC‑CACCAGCG‑CGCCACCTGCA‑TGGTTGCCCGCCACGGTCTGCTGGCGCTGCCGGCTGGGACTTTTCTTTCATTTg                                                                                                                                                                     >  2:1050602/1‑238 (MQ=255)
                                                                            gCAGGCGCATTGATTGCCCA‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCg                                                                                                                                                                 >  2:1359118/1‑239 (MQ=255)
                                                                             cAGGCGCATTGATTGCCCA‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCg                                                                                                                                                                 <  1:96400/238‑1 (MQ=255)
                                                                             cAGGCGCATTGATTGCCCA‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGt                                                                                                                                                                >  2:123119/1‑239 (MQ=255)
                                                                                 cgcATTGATTGCCCA‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CCGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTTCA‑TGTTTTACCGCCCCGGTCTGCCGGCGCTGCTGGCTTGCCGTTTTCTTGCATTTTTCCGTACg                                                                                                                                                             >  2:828701/1‑238 (MQ=255)
                                                                                  ggatgtggtgCCCACGGGGGTTTTGGATTTTCTGCTTCCGTTTGGGTTTTTGG‑CCGCCGCAGCAAGTCGGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAT‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTCACCGCCACGGTCTGCTGGCGCTGCTGGCTTGACGTTTTCTTGCATTTGTCCGTACg                                                                                                                                                             <  2:448110/230‑1 (MQ=255)
                                                                                   cATGGATTGCCCG‑GGGGGTTATGGTTTTTCGTCCTACGATTGCGTTTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACgctg                                                                                                                                                          <  2:696881/239‑1 (MQ=255)
                                                                                    attgattgCCCA‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACgct                                                                                                                                                           >  1:1248484/1‑237 (MQ=255)
                                                                                      tgattgCCCA‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACgctgct                                                                                                                                                        >  2:1071573/1‑238 (MQ=255)
                                                                                          tgCCCA‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTctgctg                                                                                                                                                                                                    >  1:197085/1‑190 (MQ=255)
                                                                                            cccA‑GGGGGTTATGGTTTTTCGGCCTCCGTTTGCG‑TTCCGACCCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAAc                                                                                                                                                  <  2:402780/238‑1 (MQ=255)
                                                                                                      ttATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCggg                                                                                                                                         <  1:235787/238‑1 (MQ=255)
                                                                                                      ttATGGATTTCCTGCCTACGTTTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCggg                                                                                                                                         <  1:1313987/238‑1 (MQ=255)
                                                                                                       tATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTa                                                                                                                                                               >  1:509438/1‑215 (MQ=255)
                                                                                                       tATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCCACCATGGCgggga                                                                                                                                       >  2:452495/1‑237 (MQ=255)
                                                                                                       tATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGaa                                                                                                                                       >  1:943212/1‑239 (MQ=255)
                                                                                                       tATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGaa                                                                                                                                       >  1:544883/1‑239 (MQ=255)
                                                                                                       tATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGaa                                                                                                                                       >  1:1197576/1‑239 (MQ=255)
                                                                                                        aTGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCAttt                                                                                                                                                                      <  1:330363/207‑1 (MQ=255)
                                                                                                            aTTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGGAttttc                                                                                                                                  >  1:653866/1‑237 (MQ=255)
                                                                                                              tttCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCgg                                                                                                                                >  1:1139761/1‑239 (MQ=255)
                                                                                                                tttGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCAACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTCTTCTTGCATTTGTCCGTACGCTGCTGCCACCCCTGGCGGGacgtttcgt                                                                                                                                >  2:1223085/3‑229 (MQ=255)
                                                                                                                tCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCgg                                                                                                                                >  1:1043507/1‑237 (MQ=255)
                                                                                                                              cGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACg                                                                                                                                                                                   <  1:378343/172‑1 (MQ=255)
                                                                                                                              cGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAAccg‑c‑c                                                                                                                >  1:879598/1‑237 (MQ=255)
                                                                                                                                aTTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGGATTTTCGGTCTGCCAAACCG‑C‑CGCt                                                                                                             >  1:417810/1‑238 (MQ=255)
                                                                                                                                aTTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCt                                                                                                             >  1:1106260/1‑238 (MQ=255)
                                                                                                                                   tcggcccgccgCAGCAAGTCTGGGCTGTTGGTTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCCCCTGCT‑TGTTTGCCCGCCCCGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTcc                                                                                                          <  2:371189/234‑1 (MQ=255)
                                                                                                                                   tccacccgcctCATCATGTCTGGGCTGCTTGCTAAGTTATATTGGGGGGCGTGT‑TTTAGGA‑AATACC‑AAAC‑CGTTGAAA‑GGCT‑GCCTGGCA‑CAGCTTCCTGCTAAATAT‑ACCCAGCG‑CGCCCCCTGCA‑TTTTTGCCCGCCACGGTCTGCTGTCGCTGCTGGCTGGACGTTTTCTTGCATTTTTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTCCCAATCCG‑C‑CGCTTcc                                                                                                          <  2:287904/234‑1 (MQ=255)
                                                                                                                                   cTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCa                                                                                                         >  1:870980/1‑239 (MQ=255)
                                                                                                                                      a‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCCGtt                                                                                                      >  1:1201698/1‑239 (MQ=255)
                                                                                                                                            ggcaacaAGTCGGGGCTGTGGGTTAGTTTATATTCGGGGGCGCGT‑GTTAGGA‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCAAAATAC‑CCCCAGCG‑CGCCCCCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTc                                                                                                  <  2:701937/237‑1 (MQ=255)
                                                                                                                                            cgcAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGtttttta                                                                                                 >  1:1076133/1‑237 (MQ=255)
                                                                                                                                             cgagaaaggtggggctgtgggtaaaGTTATATTCAGGGGCGCTG‑GTTAGGA‑AATACA‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CACTTTCCTGCAAAATAT‑CCCCGGCG‑CCCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCGGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCaa                                                                                                <  2:948142/216‑1 (MQ=255)
                                                                                                                                                           tggttgGCAAAGTTATATTCGGGGGGGCTG‑GTTGGGA‑AATACC‑AAAC‑GGGTAAAG‑GGTG‑GGCGGGCA‑CAGCTCCCTGTAAAATAC‑CCCCAGCG‑CCCCCCCTGAT‑TGTTTGACCGCCACGGTCGGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCAAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGa                                                                                   <  2:879598/234‑1 (MQ=255)
                                                                                                                                                           aaaagagacaggTTATATTCAGGGGCGCTG‑GTTAGGG‑AACACA‑AAAC‑CGGGGAAA‑GGCT‑GGCTGGCA‑CAGTTTCCTGCTAAATAC‑CCCCGGCG‑CGCCCCCTGCA‑TGTTTGACCGCCCCGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGAt                                                                                  <  2:1098724/228‑1 (MQ=255)
                                                                                                                                                            tgctgGTAAAGTTATATTGAGGGGCGCTG‑GTTAGGA‑AAAACA‑AAAA‑CGGTGAAA‑GCCG‑GGCTGGCA‑CAGCTTCCTGCAAAATAT‑CCCCTGCG‑CGCCCCCTGCA‑TTTTGGCCCCCCCCGGTCTGCGGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCGGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGAt                                                                                  <  2:1043507/238‑1 (MQ=255)
                                                                                                                                                            tgctgGCTAAGTTATATTCAGGGGCGCTG‑TTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGAt                                                                                  <  1:1071573/238‑1 (MQ=255)
                                                                                                                                                            tgctgGCTAAGTTATATGCAGGGGCGCTG‑TTTAGGA‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CGGCTTCCTCCAAAATAC‑CACCAGGG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGAt                                                                                  <  1:234769/238‑1 (MQ=255)
                                                                                                                                                            tgctgGCTAAGTTATATCCAGGGGCGCTG‑GTTAGGG‑AATCCC‑AAAC‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCCCCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGAt                                                                                  <  1:826956/238‑1 (MQ=255)
                                                                                                                                                            tgcgggtaaatttATTTTCGGGGGCTCGG‑TTTAGGA‑AATCCA‑AAAA‑GGGTGAAA‑GGCT‑GGCGGGCC‑CAGCTCCCTGCTAAATAT‑CACCGGCG‑CGCCCCCTGCT‑TTTTTGCCCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGAt                                                                                  <  2:37581/227‑1 (MQ=255)
                                                                                                                                                            tgcggctaaaGTTATTTCCGGGGGCCCGG‑TTTAGGA‑AATCCC‑AAAC‑CGG‑GAAA‑GGGTGGGCTGGCA‑CCGTTCCTTGCAAAATAC‑CCCCGGCG‑CGCCCCCTGCT‑TTTTTGCCCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGAt                                                                                  <  2:544883/230‑1 (MQ=255)
                                                                                                                                                              ctgGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTTTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTTGTTAAggggtat                                                                                 >  2:1084955/1‑234 (MQ=255)
                                                                                                                                                               tggctagtttagttgctggggCGTTG‑TTTGGGA‑AATCCC‑AAAA‑CGGTGACG‑GTCG‑GGCTGGCA‑CAGCTTCATGTTAAAATG‑CCCCAGGG‑CGCCCCCTGCA‑TGTTTGACCGCCACGGTCTGCTGGGGCTGCTGGCTGGACGTTTTCTTTCTTTTGTCCGTACGCTGCTGCCACCCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCt                                                                              <  2:230840/222‑1 (MQ=255)
                                                                                                                                                                     aGTAATATTGAGGGGCGCTG‑GTTA‑GG‑AAAACC‑AAAAGCGGTGAAA‑GGCG‑GGTGGGCG‑CAGCTTCCTGCTAAATAC‑CCCCAGCG‑CGCCACCTGCA‑TGTTGGCCCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGt                                                                        <  2:859427/239‑1 (MQ=255)
                                                                                                                                                                         ttatttcggggggCTGTGTTGGGGAAATACA‑AAAA‑GGGTGAAG‑GGTT‑GGCTGGCA‑CAGTTTCCTGCTAAATAC‑CCCCGGGG‑CGCCCCCTGCA‑TGTTTGCCCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCa                                                                      <  2:325276/232‑1 (MQ=255)
                                                                                                                                                                            ttCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGGATTTCCGGCTTGCCAAAACG‑C‑CCCTTCCAGGTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCggg                                                                 >  2:361258/1‑237 (MQ=255)
                                                                                                                                                                                ggggCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTa                                                              >  1:221001/1‑238 (MQ=255)
                                                                                                                                                                                 gggCGCTG‑GTTAGGG‑TATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTTCCAAACCG‑C‑CGCTTCCAGTTTTTCCCCTGGTTAAGTGGATTGCTGTGGGTCCGCGTGGTaa                                                             >  1:139883/1‑238 (MQ=255)
                                                                                                                                                                                 gggCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGCATTTTCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTTCGGGTCAGCGTGGGaa                                                             >  2:1200807/1‑238 (MQ=255)
                                                                                                                                                                                 gggCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGTTCTG‑CAAACCGCC‑CGCTTCCATTTTTTCAACTGTTTAAGGGGAttctggtgggcagcgggggaaa                                                             >  1:914926/1‑218 (MQ=255)
                                                                                                                                                                                  ggggcTG‑GTTAGGA‑AATCCC‑AAAC‑GGGTGAAA‑GGCT‑GGCGGCCA‑CAGTTCCCTGCAAAATAC‑CCCCGGCG‑CCCCCCCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAAc                                                            <  2:1139761/235‑1 (MQ=255)
                                                                                                                                                                                    gggaggtgtAGGG‑AAAACCAAAAA‑CGGTAAAA‑GGCG‑GGCGGGCA‑CAGCTTCCGGCAAAATAC‑CCCCAGCG‑CGCCCCCTGCT‑GTTTTGCCCGCCACGGTCTGCTGGCGTTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTCCGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAAc                                                            <  2:730365/230‑1 (MQ=255)
                                                                                                                                                                                    cgcTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAg                                                         >  1:836717/1‑239 (MQ=255)
                                                                                                                                                                                              gggaagtACA‑AAAC‑CGGTGAAA‑GCCT‑‑GCTGGCACCATCTTCCGCTTAATTAT‑CACCAGCG‑CGCCCCCTCCT‑TTTTTGCGCGCCACGTTCTTCTGGCGCGGCTGGCTGGACGTTTTCTGGCAGTTGTCCAGACGCTGCTCCCACCCATGGCGGGATTTTCCGGTCTGCCAAGCCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTTCTGTGGGTCAGCGTGGTAACCAGTTTTGGCt                                                 <  2:374625/233‑1 (MQ=255)
                                                                                                                                                                                               ggaaaTCCC‑AAAA‑CGGGGAAG‑GGCG‑GGGTGACA‑CAGTTTCTTGTTAAATAT‑CACCAGGG‑CGCCCCCTGTT‑TGTTTGCCCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCt                                                 <  2:1024023/235‑1 (MQ=255)
                                                                                                                                                                                               gg‑AATCCA‑AAAA‑CGGGAAAA‑GGCT‑GGCTGGCC‑CAGCTTCCTGTTAAATAT‑CCCCGGCG‑CGCCACCTGCA‑TGTTTGACCGCCTCGGTCTGCTGCCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTa                                                <  1:1131947/238‑1 (MQ=255)
                                                                                                                                                                                                gaaaTCCC‑AAAA‑CGGTGAAA‑GGCG‑GGCGGGCC‑CAGTTTCCTGTTAAATTA‑CCCCAGCG‑CGCCACCTGCA‑TGTTTGCCCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTa                                                <  2:584861/236‑1 (MQ=255)
                                                                                                                                                                                                     aCC‑AAAC‑CGGTGAAG‑GGCG‑GTCTGGCC‑CTG‑TTTCTCCTAAATTTCCCCCGGCC‑CCCCCCCTGCT‑TTTTTGCCCGCCCCGTTCGCCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCtt                                          <  2:907634/239‑1 (MQ=255)
                                                                                                                                                                                                     aCC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACg                                                                                                                                                                                                            >  2:603906/1‑79 (MQ=255)
                                                                                                                                                                                                     aCC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACg                                                                                                                                                                                                            <  1:603906/79‑1 (MQ=255)
                                                                                                                                                                                                     aCC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTTTCCGTACGCTGCTGCCAACCATGGCGGGAATTTTCCTTCTCCCAAACCG‑C‑CGCTTCCCGCTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCtt                                          >  2:265164/1‑239 (MQ=255)
                                                                                                                                                                                                     aCC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCCGGTTTTTCACTGGTTAAGTGGGTTGCTGGGGGGCAGCGGGGTGACCAGGTTTGGCTTTGCCtt                                          >  2:21944/1‑239 (MQ=255)
                                                                                                                                                                                                     aCC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CCCTTCCCGTTTTTCACCTGGGTAAGTGGGTTGCTGTGGGACACAGCGGGGACCAGTTTTTGCtgttcttt                                          >  2:1191549/1‑232 (MQ=255)
                                                                                                                                                                                                      cc‑AAAA‑CCGGGAAATGTCG‑GGCGGGCA‑GTGCTTCCTCTTAAATAC‑CCCCCGCG‑CCCCCCTTGCT‑TTTTTGCCCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCtt                                          <  2:836717/239‑1 (MQ=255)
                                                                                                                                                                                                           aa‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑AGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGTATTTCCGGTCTTCCAAACCG‑CGCGTTTCC‑GCTTTTCAACTGGCTAGGCGGCTTGGTGTGGGTCCGCGTGGTAACCAGATTTGGCGATGGCCTTAGTa                                     >  2:1299587/1‑239 (MQ=255)
                                                                                                                                                                                                               ggTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGa                                  <  1:1359118/239‑1 (MQ=255)
                                                                                                                                                                                                                 tGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAGTTTCCGGGCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGAGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTTGGCATGGCTTTAGTATGAt                                 >  1:1102470/1‑238 (MQ=255)
                                                                                                                                                                                                                 tGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGa                                  >  1:1035802/1‑237 (MQ=255)
                                                                                                                                                                                                                 tGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGGCAGGGTGGGAACCAGTTTTGGCTATGCCTTaaagatgtt                                 >  2:917415/1‑231 (MQ=255)
                                                                                                                                                                                                                 tGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCCGTCTGCCAAACCG‑C‑CGCTTCCCGGTTTTCAACTGGTTAAGTGGTTTGCTTTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGAt                                 >  2:155729/1‑238 (MQ=255)
                                                                                                                                                                                                                   aaa‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGGTTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTcc                              >  1:1029917/1‑239 (MQ=255)
                                                                                                                                                                                                                            ggctggcA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGGATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGCTTTTCAACTGGGTAAGTGGATTGCTGTGGGTCCGCGTGGTGACCAGTTTTGGCTCTGCCTTAAGTATGATTCcgttcgtt                       >  2:317854/1‑239 (MQ=255)
                                                                                                                                                                                                                             gctggcA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGGATTTCCCGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTTAGTGGTTTGCTGTGGGTCAGCGTGGCAACCAGCTTTGGCTCTGCCTTCAGAAAGATTCCGTTCGTTa                      >  2:1027797/1‑239 (MQ=255)
                                                                                                                                                                                                                             gctggcA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTa                      >  2:1358049/1‑239 (MQ=255)
                                                                                                                                                                                                                             gctggcA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGGGGGTCCGCGTGGGAACCAGTTTTTGCTATGCCTTTAGTATGATTTCGTTCGGTa                      >  1:691315/1‑239 (MQ=255)
                                                                                                                                                                                                                                  ca‑caTCTTCCTGCAAAATAC‑CCCCAGCG‑CGCCCCCTGCA‑TGTTTGCCCGCCCGGGTCTGCTGGCTCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCAGGGCGGGAATTTCCGGTCTGCAAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACg                  <  2:1277181/238‑1 (MQ=255)
                                                                                                                                                                                                                                       gCTTCCTGCTAAAAAC‑CCCCGGCG‑CGCCACCTGAA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATg             <  1:357979/239‑1 (MQ=255)
                                                                                                                                                                                                                                        cTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGa            >  1:522919/1‑239 (MQ=255)
                                                                                                                                                                                                                                         ttCCTGCTAAATAT‑CACCAGCG‑CGCCCCCTGCA‑TGTTGGACCGCCCCGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGa            <  1:863741/238‑1 (MQ=255)
                                                                                                                                                                                                                                         gacgggcaaaaTAT‑CCCCGGCG‑CGCCACGTGCA‑TGTTTGCCCGCCCCGGTCTGCTGGCGCGGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATg             <  1:773565/229‑1 (MQ=255)
                                                                                                                                                                                                                                         cttctggcaaaTTT‑CCCCCGCGCCGCCCCCTGCA‑TGTTGGCCCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCa               <  1:21944/228‑1 (MQ=255)
                                                                                                                                                                                                                                           cgtGCAAAATAC‑CACC‑GCG‑CGCCCGCTGGATTTTTTGCCCGCCCCGGTCTGCTGGCGCTGCGGGCTGGACGTTTCCTTGCTTTTGTCCGTACGCTGCGGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGAAGa         <  2:593777/237‑1 (MQ=255)
                                                                                                                                                                                                                                            ttGCTAAATAT‑CCCCGGCG‑CGCCACTGGCA‑TGTTTGCCCGCCCCGGTTTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGGCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGAAGAt        <  1:938647/238‑1 (MQ=255)
                                                                                                                                                                                                                                             tgttAAATAC‑CCCCGGCG‑CGCCCCCTGCT‑TTTTTGCCCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGAAGAt        <  2:385048/235‑1 (MQ=255)
                                                                                                                                                                                                                                                  aaTAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGAAGATCAGGTa  >  1:1208902/1‑239 (MQ=255)
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CATGTTTGCCACGCTGTTTTTAGAAAACGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCA‑GGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGA‑CCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTG‑GTTAGGG‑AATACC‑AAAA‑CGGTGAAA‑GGCT‑GGCTGGCA‑CAGCTTCCTGCTAAATAT‑CACCAGCG‑CGCCACCTGCA‑TGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCG‑C‑CGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGAAGATCAGGTA  >  NC_000913/3153653‑3154124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑