Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,206,454 A→G 12.3% intergenic (‑200/‑7) ttdR ← / → ttdA transcriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,206,4540AG12.3% 305.7 / 13.1 140intergenic (‑200/‑7)ttdR/ttdAtranscriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit
Reads supporting (aligned to +/- strand):  ref base A (33/86);  new base G (11/7);  total (45/95)
Fisher's exact test for biased strand distribution p-value = 7.05e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 142 total aligned reads displayed.

TACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGATTGTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATT  >  NC_000913/3206216‑3206691
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                      
tACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCTAACAAACAACAAAACT‑AGa                                                                                                                                                                                                                                                        >  2:295705/1‑239 (MQ=255)
 aCCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAg                                                                                                                                                                                                                                                       <  2:1369602/239‑1 (MQ=255)
    tGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAAATTTTTTAAACAAAAAACAAAAAA‑GGAGttt                                                                                                                                                                                                                                                    >  2:484347/1‑238 (MQ=255)
       aaGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTACGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTACGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGcc                                                                                                                                                                                                                                                  <  2:222988/238‑1 (MQ=255)
        aGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑TTATTTTTTCATACAAAAAAAAAAACA‑TGAGTTggcca                                                                                                                                                                                                                                                >  2:1174881/1‑235 (MQ=255)
           cTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCatg                                                                                                                                                                                                                                               <  1:529821/237‑1 (MQ=255)
                  tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGa                                                                                                                                                                                                                                       <  2:402569/238‑1 (MQ=255)
                  tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGa                                                                                                                                                                                                                                       <  2:1224327/238‑1 (MQ=255)
                  tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGa                                                                                                                                                                                                                                       <  1:1133157/238‑1 (MQ=255)
                  tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGa                                                                                                                                                                                                                                       <  1:303635/238‑1 (MQ=255)
                         cAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGt‑aat                                                                                                                                                                                                                               <  1:1058654/238‑1 (MQ=255)
                               ttCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCatga                                                                                                                                                                                                                                              <  1:173132/218‑1 (MQ=255)
                               ttCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAc                                                                                                                                                                                                                        <  1:264100/239‑1 (MQ=255)
                                tCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑a                                                                                                                                                                                                                      <  1:1060572/239‑1 (MQ=255)
                                     aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑gg                                                                                                                                                                                                                   <  1:351998/236‑1 (MQ=255)
                                       cGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGT‑GAATTTTT‑CAGACCAAAACCAAAACT‑AGCGTTGCTCTGATGAGCGGCAGT‑AATAAGCAAC‑A‑GACACTg                                                                                                                                                                                                              >  2:554090/1‑239 (MQ=255)
                                            aTTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATaa                                                                                                                                                                                                        <  2:1345318/239‑1 (MQ=255)
                                                tCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTg                                                                                                                                                                                                    <  2:356486/239‑1 (MQ=255)
                                                   gCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GGATTTTTTCACACAAAAAAAAAAAAT‑GGAGTTGTCATGATGTGGGAAAGT‑AAAAAACAAC‑A‑GGAAGTG‑AATAAGTTGAC‑a                                                                                                                                                                                                >  2:1314934/1‑239 (MQ=255)
                                                   gCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑a                                                                                                                                                                                                <  1:230324/239‑1 (MQ=255)
                                                        tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑Agaga                                                                                                                                                                                            <  1:319244/238‑1 (MQ=255)
                                                        tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGGTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGAt                                                                                                                                                                                           <  1:554090/239‑1 (MQ=255)
                                                             tAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGATTGTCg                                                                                                                                                                                      <  2:443225/239‑1 (MQ=255)
                                                                 cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTTAGACAAATACAAAAAAT‑GGAGTTGTCCTTGTGAGCGGAAGT‑AAAAAAAAAA‑A‑AGCAACG‑AAAAAGATTAA‑AGAGATTGTGGcgca                                                                                                                                                                                  >  2:76146/1‑236 (MQ=255)
                                                                 cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAAAAAAAACT‑GGAGTTGTCAAGGAGAGGGGAAGT‑AATAAACAAA‑A‑AGCAAGG‑AATAAATTTGC‑AGAGAATGtgtctca                                                                                                                                                                                  >  1:764714/1‑233 (MQ=255)
                                                                 cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAAATTTTTCAAACAAAAAAAAAAAAT‑TGAGTTTTCCTGGTGTGTGGAAGT‑AAAAAACAAC‑ACGGCA‑TG‑GATAAAGTGAC‑AGAGAATGTCGC‑Taa                                                                                                                                                                                 >  1:716197/1‑239 (MQ=255)
                                                                      tgtATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTTAAACAAAAAAAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAAAAAA‑A‑GGCAGAG‑AATAAAATGAC‑AGAGATTGTCGC‑TAACttt                                                                                                                                                                             >  2:977525/1‑238 (MQ=255)
                                                                        tATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCa                                                                                                                                                                                                                 <  1:381189/203‑1 (MQ=255)
                                                                           ttCGCAAAACATTGCAATTCCCTGCTCTGGCGAAATATTCATTCTTATTTTCGCGTTGATTCACAAACTGTTAATTACATATTCCGGGGGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑AAATTTTTCCAGAAAAATACAAAACCG‑GGAGTTGCCATGATGAGCAAAAGA‑AATAAGCAAC‑G‑GGAAGTG‑AATAAGTGGAC‑AGAGATTGTCGC‑TAATTTTACCGcc                                                                                                                                                                       <  1:1034508/239‑1 (MQ=255)
                                                                            tCGAAAAACATTGCCTTTCCCTGCTCTGGCCCAATATTCATTCTTATTTTCGCGTTAATTCACAAACTGTTAATTACATATTCACGGTGAAAAAAAATAAAAAACCAAATTTTTGGTGGTAGTTTGGGGC‑GGT‑GAATTTTTCAAGAAAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGAAAC‑A‑GGCAGTG‑AATAAGTTGAA‑AGAGATTGTCGC‑TAACTTTACCGCCa                                                                                                                                                                      <  2:159431/239‑1 (MQ=255)
                                                                                aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAATAAAAAAAAT‑GGAGTTGCCATGATTAGCGGAAGT‑AAAAAAAAAC‑A‑AGAAGAG‑AATAATCTGAC‑AGAGGATGTCGC‑GACAATTACCGCCATTAt                                                                                                                                                                  >  1:673571/1‑239 (MQ=255)
                                                                                  aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGGAAAATATAAAAAAA‑GGAGGTGCCCTGTTGTGGGGAAGG‑AATAAACAAA‑A‑GGAAAAG‑GAAAAAGTGAC‑AGGGATTGTCGC‑TAAATTTACCCCCCTAAttt                                                                                                                                                                >  1:113305/1‑239 (MQ=255)
                                                                                       tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGGAATTTTTCCA‑ACACAAACAAAAACT‑GGAGTTTGCATGGTGGGGGGAAGG‑AATAAGTAAC‑A‑AGCAGAG‑AAAAAGTTGTA‑AGAGGTTGTCGC‑Taaactctacgcaccaattttcta                                                                                                                                                            >  2:68787/1‑217 (MQ=255)
                                                                                          cATTCCCTGCTCTGGCGAAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTGGTGGC‑GGT‑AAATTTTTCCAGAAAAATAAAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGATTGTCGT‑TAACTTTACCGCCATGATTTCT‑ACCCGa                                                                                                                                                       <  1:817567/239‑1 (MQ=255)
                                                                                              cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑gg                                                                                                                                                                                                                   <  1:129546/179‑1 (MQ=255)
                                                                                                   ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAACAAAAACA‑GGAGTTGTCACGGTGGGCGAAAGT‑AAAAAGCAAC‑A‑CGCAGGG‑AAAAAATTGTC‑AGAAAATGTCGC‑TAACTTTACCACCCCGATTTCT‑ACCCGACAGCCtgat                                                                                                                                              >  2:487715/1‑239 (MQ=255)
                                                                                                        gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCTAACAAAAAAAAAAAAT‑GGGGTTGGCATGATGAGGGGAAAT‑AAAAAAAAACAA‑GACAG‑G‑AATAAGTTGACAAGAGATTGTGGT‑GAACTTTCCGCCCAGAATTTTT‑ACCGCAATGCGTG‑TGACgg                                                                                                                                         >  2:638215/1‑238 (MQ=255)
                                                                                                          gcAATATTAATTCTTATTTTCATGTGGATTCACGCACTGTTATTTACATACTCCCGGTGTAAAAAAATAAAAAACCACTTTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTCCCAGGATGAGGGAAAGT‑AATAAGCAAC‑T‑GGCAGTG‑AAAAGGTTGGC‑AGCGATTGTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACgtg                                                                                                                                        <  1:874948/238‑1 (MQ=255)
                                                                                                          gaaaTATTATTTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGAAAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGATTGTCGC‑TAATTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACgtg                                                                                                                                        <  2:261785/236‑1 (MQ=255)
                                                                                                             atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGa                                                                                                                                                                                                                                       <  1:851443/147‑1 (MQ=255)
                                                                                                              tatTCATTCTTTTTTTCGCGTTGATTCACTAACTGTTAATTACATATTCACGGTGGAAAAAAATATAAACCCACATTTTTAGTGTTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACG‑GGAGTTGCAATGATGAGGAAAAGT‑AATAAGCAAC‑A‑GGCAGTA‑AATAAGTTGAC‑AGAGATTGTCGC‑TAACTTTCCCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                   <  1:28355/239‑1 (MQ=255)
                                                                                                              tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGATTGTCGC‑TACCTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACgtg                                                                                                                                        <  1:1346673/234‑1 (MQ=255)
                                                                                                              tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGA‑GAAATTTTTCACAAAAATAAAAAAAAT‑GGGGTTGTCATAGTGGGCGTGAGT‑AAAAAGAAAA‑A‑AGAAAAG‑AATAAAATTTC‑AGAGATATTTGC‑TAAAATTATCCCCCTGCATTTT‑ACCCCAATGTCtgatgagaggtggga                                                                                                                                   >  1:739830/1‑230 (MQ=255)
                                                                                                              tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGAGGAGCGAAAGT‑AAAAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGATTGTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                   <  1:977525/239‑1 (MQ=255)
                                                                                                              tatTCATTCTTATTTACGCGTTGATTCACGACCTGTTAATTACATAGTCACGGTGGAAAAAAATATAAACCCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAACACAAAAATT‑GGAGTTGCCATGAGGAGCGAAAGT‑AATAACCAAC‑A‑GGCAGTG‑AATAAGTTGAA‑AGAGATTGTCCA‑TAATTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                   <  1:777044/239‑1 (MQ=255)
                                                                                                                ttcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTTCGACAAAAACAAAAACA‑AGAGTTGCCATGATGAGGGGAAGA‑AAAAAACAAA‑A‑GGAAGAG‑AAAAAGATGAA‑AGAGAATGTCGC‑TAACATTTCCGCCATAATTTTT‑ACACGCATGTCGCATGAGGTGGTGGGTa                                                                                                                                 >  2:28355/1‑239 (MQ=255)
                                                                                                                        tATTTTCGGTTTGTTTCACGAAAGGTAAATTACATATTCAGGGTGTAAAAAAATATAAAACCACATTTTTAGTGGGAGTTTGTGGG‑GGT‑AAATTTTCCCAGACAAATAAAAAAACG‑GGAGTTGCCAAGATGAGC‑AAAGTAAAAAAGCAAA‑A‑GGCGGTA‑AATAAGTTGAC‑AGAGATTGTCGT‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                         <  2:303189/239‑1 (MQ=255)
                                                                                                                        tATTTTCGCTTTGATTCACGAACTGTTAATTACATATTCACGGTGACAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAAACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGATTGTCGT‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                         <  1:1211880/239‑1 (MQ=255)
                                                                                                                          ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAACAAAAAAT‑GGAGGTGTCATGATGAGCGGAAGA‑AATAAACAAC‑A‑AACAGAG‑AATAAATTGAC‑AGAGATTGTCGCGTAAATTT‑CCCCCCTGATTTTT‑ACCCCAAAAGCTGATGACGTTGTGGGGAAAATAAAACa                                                                                                                       >  2:731558/1‑239 (MQ=255)
                                                                                                                          ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAAATTTTTCAAAAAAAAAAAAAAAAT‑AGAGTTTGCATTATGAGGGAAAGG‑AAAAAAAAAA‑A‑GGGAGAG‑GAAAAATTGAA‑AAAAAGTGTTAG‑TAACATTACCGCCCATATTTTT‑ACCCGGAAGGCTGATGTGGGGGGGGGTGAAATAAAACa                                                                                                                       >  2:975011/1‑239 (MQ=255)
                                                                                                                          ttttCGCGTTGATTCACGAAATGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGA‑GGT‑GAAATTTTTCATACAAATAAAAAAAAT‑CAAGGTGTCATGATAAGAGGAAAA‑AATAAGCAAA‑A‑GGAAGGG‑AAAAAGATGAC‑CGAGATTGTCGC‑TAACTTCAACGGCATGATTTCT‑ACCCCAAAGACTGAAGACGCGGGGGGTAAAcacaaaaa                                                                                                                       >  1:114003/1‑232 (MQ=255)
                                                                                                                           tttCGCATGAATTAACGAATTTTAAATTAATTATAAAAGTTGGAAAAAAATAGAAAACCAAATTTTTAGTGGTATTTTGTGGA‑GGT‑AAATTTTTCCAGAAAAATACAAAAACT‑GGAGTCGCAATGATGAGTGAATGT‑AATAAGCACC‑G‑GGAAGTG‑ATTAATTTGAC‑AGAGTTTGGCCT‑TAACTTTCCCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAg                                                                                                                      <  1:551818/239‑1 (MQ=255)
                                                                                                                                   gaatccgcGAATTTTTAATTAGATAGTGCCGGTGAAAAAAAATAAAAAACCACTGTTGTAGTGGTGGTTTGGGGC‑GGG‑GAATTTTGCCAAACAAATAAAAAAACG‑GGTGTTGCTATGACGAGCAAAATT‑AAAAAAAAAC‑A‑GGCAGTG‑AATAAGTAGAC‑AAAGATTGTCGT‑TAACTTTCCCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTAGATAAACTAAAACAGCTAAAgg                                                                                                               <  2:1112907/231‑1 (MQ=255)
                                                                                                                                               tGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGG‑GAAATTTTTCAGACAAATAAAAAAAAT‑GGAGTTGGCATGATGAGCGAAAGT‑AATAAACAAC‑A‑AGCAGGG‑AATAAATTGAC‑AGAAATTTTCGC‑TAACTTTAACGCCCTGATTTCT‑ACCCCAATGCCTGGTGACGTGGGGGGTAAACTAAAACAACTAAAGGGTG‑C‑CGAAAcgtc                                                                                                >  1:812328/1‑239 (MQ=255)
                                                                                                                                                 ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAATACAAAAAAT‑GGAGTTTTCATGATGAGCGAAAGA‑AATAAGCAAC‑A‑CGCAGGG‑AATAAATTGAC‑ACAGATTGTCGC‑CAACTTTACCGCCCTGATTTCT‑ACCCCCATGCCCGATGACGTGGTGGGGAAAACACAAAAGCTAAAGGGTA‑C‑CGgaaagcgg                                                                                               >  2:599508/1‑233 (MQ=255)
                                                                                                                                                 ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGC‑CAATTTTTTTAGAAAAAAGCAAAAAATCTGGTTTGGCAAG‑TGGATGTAAGG‑GAAAAACAAG‑A‑GGCCGTG‑TATAAGTTATA‑AGTAATTGTCGG‑AAAGTTTTACACCATGATTTCT‑CCGCCCAAGCCTCATGACGTGGTGGTTAAACTAAAAAAACCAAACGATgggcaaacgccg                                                                                                 >  2:1244826/1‑227 (MQ=255)
                                                                                                                                                   aaTTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GGATTTTTTCTAACAAATACAAAAAAT‑TGAGTTGCCATGATGAGGGAAAGA‑AATAAGAAAA‑A‑AGGAATG‑AATAAAATTAA‑AGAGATTGGCGC‑CAACCTTACAGCCATGATTTTT‑ACCCGAATGCCTGATTACGGGGTGGGAAAACTAAAAAAACTAAAGGATG‑C‑CGaaaaactgtcg                                                                                            >  1:904245/1‑231 (MQ=255)
                                                                                                                                                   aaTTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAATACAAAAACT‑GGGGGTTCCCTGATGAGAGAAAAG‑AATAAACAAC‑A‑AGCAGTG‑AATAAATTGAC‑AGAGATTTTCGC‑TTACTTTACCCCCCTGATTTTT‑TCCCCCATGCCCGATGACGTGGGGGGTAAACTCAAAAAGCTAAAAGATT‑C‑CGAAACctcgtc                                                                                             >  1:398705/1‑238 (MQ=255)
                                                                                                                                                   aaTTAAATATACACGGTGGCAAAAAAAATAAACCCACATTTTTAGTGGTATTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGATTGTCGC‑TAATTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGtcgtcg                                                                                            <  1:484347/239‑1 (MQ=255)
                                                                                                                                                         atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCATACAAAAACAAAAAAA‑TGAGTTGCCATGGTGAGCGAAAAG‑AATAAACAAC‑A‑AGAAGTG‑AAAAAATTGAA‑AGAGATTGTTGC‑TAAATTTACCGCCCTGATTTCT‑ACCCGAAATCCTGATGAAGTGGGGGATCAAAATAAACAGCTAAAGGAGT‑C‑CCAAAAATTGTCGGTgggg                                                                                      >  1:1352722/1‑239 (MQ=255)
                                                                                                                                                         atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAATACAAAAACT‑TGAGGTGGCCTTATGGGCGGAAGA‑AATAAACAAA‑A‑AGCAGTG‑AATAAGTTGAC‑AGAGATTGTCGC‑TTACTTTACCGCCCTGATTTTT‑TCCCCGATGCCTTATGACGTGGGGGGTAAAATAAAACAACTAAAGGAAGCC‑CGAAAC‑TCGTTGGTgggg                                                                                      >  1:358918/1‑239 (MQ=255)
                                                                                                                                                         atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATaa                                                                                                                                                                                                        <  1:1278150/130‑1 (MQ=255)
                                                                                                                                                          tatTCACGGTGGAAAAAAATAAAAACCCACATTTTTAGTGGTAGTTTGTGGG‑GGT‑AAATTTTTCCAGAAAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGAAGTG‑AATAAGTGGAC‑AGAGATTGTCGC‑TATCTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGa                                                                                     <  2:1241603/239‑1 (MQ=255)
                                                                                                                                                          tatTCACCGTGGAAAAAAATAGAAAACCAAATTTTAAGGGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAAAAAAATACAAAAACT‑GGAGGTGCCATAAGGGGCAAAATT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTGGAC‑AGAGATTGTCGC‑AAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGa                                                                                     <  1:1084316/239‑1 (MQ=255)
                                                                                                                                                           atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAAATTTTTTATAAAAAAACACAAAAT‑GGAGTTTTCATGAGGAGGGAAAAT‑AATAAACAAA‑C‑AGCAGAG‑AATAAGTTGAA‑CGAGATTGTCGC‑TAAATTTAACCCCATGATTTTT‑ATCCGAATGCCTCGTTAAGTGGGGGGTAAACTAAAACAGCTAAACGAAG‑C‑CCAAAccaagtacattgggga                                                                                    >  2:1128489/1‑224 (MQ=255)
                                                                                                                                                           atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAAATTTTTCCGACAAAAACAAAAACA‑GGGGTTTCCATTGTGAGGGGAAGT‑AATAAACAAC‑A‑GGCAGTG‑AAAAAATTGAC‑AAAGAATGTCGC‑TAACTTTACCCCCCTGATTTTT‑ACCCCAATTCCTGATTGAGGGGTGGGTAAACTAAAAAAACTCAAAGATT‑G‑CGAAACGTCCGCGATggggga                                                                                    >  1:1241603/1‑237 (MQ=255)
                                                                                                                                                               agggtgaaaaaaaaTAAAAAACCACATTTTTGGTGGGAGTTTGTGGC‑GGT‑GAATTTTTACAGACAAATACAAAAACG‑GGGGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGTTTGTCGC‑TAATTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAAtt                                                                                <  2:1341638/231‑1 (MQ=255)
                                                                                                                                                               aCGGTGGAAAAAAATATAAACCCACATTTTTAGTGGTAGTTTGTGGG‑GGT‑GAATTTTTCAAGAAAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGATTGTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAAtt                                                                                <  2:812328/239‑1 (MQ=255)
                                                                                                                                                                 ggTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGC‑GAATTTTTCCAAAAAAAAAAAAAAAAA‑TGGGGTGTCATTATGAGCGGAAAG‑AAAAAAAAAA‑A‑AACAATG‑AAAAAATTGAC‑AGAGAATGTCGC‑TCACATTTTCACCCTAATTTCT‑ACCCCAAAGCCCGATGAGCGGGGGGTTAAAATCAAAAAAATAAACGATG‑C‑CGAAACGTCGCCGATGGGGAAAAatat                                                                              >  2:1182401/1‑239 (MQ=255)
                                                                                                                                                                  ttGGCAAAAAATATAAAACCACATTTTAAGTGGTATTTTTGGGC‑GGT‑GAATTTTACCAGACAAAAACAAAAACT‑GGGGTTTCGTTGAGGAGCAAAAGT‑AATAACCAAC‑A‑GGCAGTA‑AATAAGTTGAC‑AGAGTTGGTGGC‑TAACTTTGCCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTAt                                                                              <  1:1128489/237‑1 (MQ=255)
                                                                                                                                                                  gTGGAAAAAAATATAAAACCACATGTTTAGTGGTAGTTTGTGGG‑GTT‑AAATTTTTCCAAAAAAATACAAAAACT‑GGAGTGGCAATGAGGAGTGAAATT‑AAAAAGCACC‑A‑GGAAGAA‑AATAATTTGAC‑AGGAATTGTCGC‑TAATTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTAt                                                                              <  1:709548/238‑1 (MQ=255)
                                                                                                                                                                  gTGGAAAAAAATAAAAACCCAAATTTTAAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGAAAAAAACAAAAACG‑GGAGTGGCCATGATGAGCAAAAGA‑AATAAGCAAC‑A‑GGAATTA‑AATAAGTAGAC‑AGAGTTTGTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTAt                                                                              <  1:638215/238‑1 (MQ=255)
                                                                                                                                                                         aaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAAAAAAATACAAAAACT‑GGATTGGCCATTATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGATTGTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATa                                                                      <  1:372883/239‑1 (MQ=255)
                                                                                                                                                                         aaaaTAAAAACCCACATTTTTAGGGGTATTTTGTGGC‑GGT‑AAATTTTTCCAGAAAAATAAAAAAACG‑GGGATGTCAATGAGGAGCAAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGTATGTCGC‑TAATTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATa                                                                      <  2:576389/239‑1 (MQ=255)
                                                                                                                                                                           aaTATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGAAAC‑A‑GGAAGTA‑AATAAGTTGAC‑AGAGTTTGTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                    <  1:731558/239‑1 (MQ=255)
                                                                                                                                                                           aaTATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTCCCAAACAAATAAAAAAACT‑GGAGTTGCAATGATGAGCGAAAGA‑AATAAGCAAC‑A‑GGCAGTA‑AATAAGTTGAC‑AGAGATTGTCGC‑TAATTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                    <  1:36974/239‑1 (MQ=255)
                                                                                                                                                                           aaTAAAAACCCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GATTTTTCCCAGACAAAAAAAAAAACG‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGAAAC‑A‑GGCGGTA‑AATAAGTTGAC‑AGAGTTTGTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                    <  2:1352722/239‑1 (MQ=255)
                                                                                                                                                                           aaTAAAAACCCAAATTTTTAGTGGTAGTTTGGGGG‑GGT‑AAATTTTCCCAGACAAATAAAAAAACG‑GGAGTGGCAATGATGAGAGAAATT‑AATAAGCAAC‑A‑GGCAGTA‑AATAAGTTGAA‑AGAGATTGTCGT‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                    <  2:1291049/239‑1 (MQ=255)
                                                                                                                                                                             tataAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑Agaga                                                                                                                                                                                            <  1:1393126/121‑1 (MQ=255)
                                                                                                                                                                                      aaaTTTTGAGTGGTAGTTTGTGGC‑GGT‑AAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAATA‑AAAAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGATTGTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGacaa                                                         <  1:487715/237‑1 (MQ=255)
                                                                                                                                                                                       caTTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCTAACAAAAAAAAAAAAT‑GGAGTTGTCATGCTGAGGGAAAAT‑AAAAAGAAAA‑A‑AGCAGGGAAAAAAGTTG‑C‑AGAGGTTTTAGC‑TAACATTCCCGCCACAACTTCTAACCCCAAT‑CCCGATTACGCGGGGGACAAAATAAAAAAACTAACAGATG‑CACAAAACG‑CGTTGCGGGGGGAAATTAATTACCATACCATTTTTGacaaa                                                        >  2:685745/1‑238 (MQ=255)
                                                                                                                                                                                       caTTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGAAAAAAACAAAAAAA‑GGAGGTGCCATGATGGGCGAAAGT‑AATAAACAAC‑A‑GGCAGAG‑AAAAAGTTGAC‑AGAGATTGTGGC‑Taa                                                                                                                                                                                 >  2:1393126/1‑121 (MQ=255)
                                                                                                                                                                                                    aattggtgGC‑GGT‑AAATTTTTCAGGCAAAACAAAAAAACT‑GGATTTCCCATGATGAGCCAAAGT‑AATAAGCACC‑A‑GGCGGTG‑AATAAGTGGAC‑AGTGTTGCTCGC‑TATCTTTGCCGCCATGATTTCT‑ACCCGAATGCCTGATGTCGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                           <  1:758974/234‑1 (MQ=255)
                                                                                                                                                                                                    aGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACG‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGATTGTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                           <  1:148146/239‑1 (MQ=255)
                                                                                                                                                                                                     gTTTGTGGG‑GGG‑AAATTTTTCCAGAAAAATACAAAACCT‑GAAGTTGCCAGAATGGGCGAAAAT‑AATAAGCAAC‑A‑GGAAGTG‑AATAAGTGGAC‑AGGGATTGTCGC‑TAATTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                           <  1:1182401/238‑1 (MQ=255)
                                                                                                                                                                                                     gTTGGTGGC‑GGT‑AAATTTTTCAAGAAAAATAAAAAAACT‑GGAGTGGCCATGATGAGCGAAAGT‑AATAATCAAC‑A‑GGCGGTA‑AATAAGTTGAA‑AGAGTTTGTCGT‑TACCTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                           <  2:821929/238‑1 (MQ=255)
                                                                                                                                                                                                      gtgtgggtagtt‑GAATTTTGACAGAAAAATAAAAACACT‑GGATTTGCGAAGAGGAGCAAAAAT‑GATAAGCAAC‑A‑TGCGGTG‑AAAAATTTAAC‑AGTAGTTGTCCA‑TAATTTTACCACCATGATTTCT‑ACCCGCATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                           <  1:1176372/227‑1 (MQ=255)
                                                                                                                                                                                                        tgtgGG‑GGT‑AAATTTTCCAAAAAAAATAAAAAAATG‑GGAGTTGCCATGAAGAGCGAAATA‑AATAAGCAAC‑A‑GGCGGTA‑AATAAGTTGAA‑AGAGATTGTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGa                                       <  2:1067518/239‑1 (MQ=255)
                                                                                                                                                                                                         ggggC‑GGT‑GAATTTTTCCAAAAAAATAAAAAAACG‑GGAGTTGCCATGATGAGCAAAAGA‑AATAAGCAAC‑A‑GGCAGTA‑AATAAGTGGAC‑AGAGATTTTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAc                                      <  2:764714/237‑1 (MQ=255)
                                                                                                                                                                                                               ggT‑AAATTTTACAAGAAAAATACAAAAACG‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTA‑AATAAGTTGAC‑AGAGATTGTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGa                                  <  2:398705/238‑1 (MQ=255)
                                                                                                                                                                                                                     aTTTTCCCAGACAAAGCCAAAAATT‑GGAGTTCCACTGTTGAGCGAAAGA‑AACAAGCAAC‑A‑GGCACTT‑AATAGGTGGAC‑AGAGATTTCCGC‑TAACTGTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGACG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTc                            <  2:1148441/239‑1 (MQ=255)
                                                                                                                                                                                                                        tttCCAAACAAATAAAAAAACT‑GGAGTTGCCATGATGAGAGAAAGT‑AATAAGCAAC‑A‑GGAAGTG‑AATAAGTTGAC‑AGAGATTGTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg                         <  1:1379660/239‑1 (MQ=255)
                                                                                                                                                                                                                        ttacaaGAAAAAGACAAAATCG‑GGAGTTGCCAGGATGAACGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AAAAAGTTGAC‑GGAGATTGTGGT‑TATCTTAACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg                         <  1:297075/234‑1 (MQ=255)
                                                                                                                                                                                                                          taaaaaaaaaaaaaaaaaTG‑GGGGTTGCAATGAGGAGCAAAAGT‑AAAAAGCAAA‑A‑GGCAGTG‑AATAAGTTGAC‑AGATTTGGTCGT‑TATCTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctgcc                       <  2:113305/226‑1 (MQ=255)
                                                                                                                                                                                                                               aaaaaaacaaaaacT‑GGATTTGCCATAATGAGAAAAATA‑AAAAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGTTTGTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCa                  <  1:1314934/237‑1 (MQ=255)
                                                                                                                                                                                                                               aaaaaaacaaaaacT‑GGAGTTGCCATGATGGGCGAAAGA‑AAAAAGCAAC‑G‑GGCAGTG‑AATAAGTTGAC‑AGAGATTGTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCa                  <  1:38975/237‑1 (MQ=255)
                                                                                                                                                                                                                                  aaTAAAAAAAGT‑AGATTTGACATGAGGAGCAAAAGT‑AATAAGCAAA‑A‑GGCAATA‑AATGAGGGGAC‑AGAGAGGGATTC‑TAACTGTACCGCCATGATTTCT‑ACCCGAATGCCAGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGAGGTTCGACAACATGCAAAAAGCGATTGACCGGAATCGTCCTGCCTGTCAGGa               <  2:689243/239‑1 (MQ=255)
                                                                                                                                                                                                                                     aaaaaaaCG‑GGAGTTGCCATGTGGAGAAAAAGT‑AATAAGAAAC‑A‑GGCAGTA‑AATAAGTGGAC‑AGAGATTGTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGacac            <  2:716197/237‑1 (MQ=255)
                                                                                                                                                                                                                                         acactgggAGTTGCGATAATGACGAAAAGA‑AATAGTCACC‑T‑GGAATTA‑AATAGGTGGAC‑AGAGTTTGTCGC‑TACTTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgg         <  2:1096056/233‑1 (MQ=255)
                                                                                                                                                                                                                                                gAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGATTGTCGC‑TAACTTTACAGCCATGATTTCT‑ACCCGAATGCCCGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATCCAACAAGCGATTGACCTGAATACTCCTGCCTGTCAGGACACCTGGGAGAta  >  2:767572/1‑238 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                      
TACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑A‑GGCAGTG‑AATAAGTTGAC‑AGAGATTGTCGC‑TAACTTTACCGCCATGATTTCT‑ACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATG‑C‑CGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATT  >  NC_000913/3206216‑3206691

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑