Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,206,475 T→A 19.4% S5R (AGT→AGA) ‡ ttdA → L‑tartrate dehydratase, alpha subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,206,4750TA19.4% 245.2 / 21.1 136S5R (AGT→AGA) ‡ttdAL‑tartrate dehydratase, alpha subunit
Reads supporting (aligned to +/- strand):  ref base T (29/71);  new base A (11/15);  total (50/86)
Fisher's exact test for biased strand distribution p-value = 2.38e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 137 total aligned reads displayed.

CAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGT  >  NC_000913/3206241‑3206712
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                      
cAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGtaat                                                                                                                                                                                                                                                     <  1:1058654/238‑1 (MQ=255)
      ttCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAc                                                                                                                                                                                                                                              <  1:264100/239‑1 (MQ=255)
            aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑gg                                                                                                                                                                                                                                         <  1:351998/236‑1 (MQ=255)
              cGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGT‑G‑AATTTTT‑CAGACCAAAA‑CCAAAACTAGCGTTGCTCTGATGAGCGGCAGTAATAAGCAAC‑A‑GACACT‑g                                                                                                                                                                                                                                   >  2:554090/1‑239 (MQ=255)
                 tAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑Gaa                                                                                                                                                                                                                                 <  2:538390/238‑1 (MQ=255)
                   aTTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATaa                                                                                                                                                                                                                              <  2:1345318/239‑1 (MQ=255)
                    ttATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAg                                                                                                                                                                                                                             <  1:378572/239‑1 (MQ=255)
                       tCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTg                                                                                                                                                                                                                          <  2:356486/239‑1 (MQ=255)
                          gCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑a                                                                                                                                                                                                                      <  1:230324/239‑1 (MQ=255)
                               tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑Ag‑a‑ga                                                                                                                                                                                                                <  1:319244/238‑1 (MQ=255)
                               tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGGTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAt                                                                                                                                                                                                               <  1:554090/239‑1 (MQ=255)
                                    tAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCg                                                                                                                                                                                                         <  2:443225/239‑1 (MQ=255)
                                    tAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATGCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTc                                                                                                                                                                                                          <  1:717129/238‑1 (MQ=255)
                                        cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTTTAGACAAATA‑CAAAAAATGGAGTTGTCCTTGTGAGCGGAAGTAAAAAAAAAA‑A‑AGCAAC‑GAAAAAGATTAA‑AG‑A‑GAT‑TGTGGcgca                                                                                                                                                                                                     >  2:76146/1‑236 (MQ=255)
                                        cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTTCAGACAAAAA‑AAAAAACTGGAGTTGTCAAGGAGAGGGGAAGTAATAAACAAA‑A‑AGCAAG‑GAATAAATTTGC‑AG‑A‑GAA‑TGtgtctca                                                                                                                                                                                                     >  1:764714/1‑233 (MQ=255)
                                        cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AAATTTTTCAAACAAATA‑CAAAAAACGTGGGTGTCCTGGTGAGCGAAAGAAAAAAAAAAC‑A‑CACAGA‑GAAAAAAATGAC‑AG‑A‑GAT‑TGTGTC‑Taa                                                                                                                                                                                                    >  2:41850/1‑239 (MQ=255)
                                        cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AAATTTTTCAAACAAAAA‑AAAAAAATTGAGTTTTCCTGGTGTGTGGAAGTAAAAAACAAC‑ACGGCA‑T‑GGATAAAGTGAC‑AG‑A‑GAA‑TGTCGC‑Taa                                                                                                                                                                                                    >  1:716197/1‑239 (MQ=255)
                                             tgtATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTTTAAACAAAAA‑AAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAAAAAA‑A‑GGCAGA‑GAATAAAATGAC‑AG‑A‑GAT‑TGTCGC‑TAACttt                                                                                                                                                                                                >  2:977525/1‑238 (MQ=255)
                                             tgtATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AAATTTTTCAGAAAAAAATAAAAAATTGGGGTTG‑CATGATTAGCGGAAGAAATAAACAAA‑A‑GGAAGT‑GAATAAGATTAA‑AG‑A‑AAT‑TGTCGC‑TAACtttt                                                                                                                                                                                               >  1:345641/1‑238 (MQ=255)
                                               tATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCa                                                                                                                                                                                                                                       <  1:381189/203‑1 (MQ=255)
                                                  ttCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑CATTTTTTCCTAAACAAC‑AAAAAAAAGGGGGTGTCACAATGAGGGCAAGTAATAAACCAC‑A‑AGCAAC‑GGAAAACTTGTC‑AG‑C‑GAT‑TGTCGG‑CCACTTTAcccc                                                                                                                                                                                           >  2:297075/1‑236 (MQ=255)
                                                  ttCGCAAAACATTGCAATTCCCTGCTCTGGCGAAATATTCATTCTTATTTTCGCGTTGATTCACAAACTGTTAATTACATATTCCGGGGGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑A‑AATTTTTCCAGAAAAATA‑CAAAACCGGGAGTTGCCATGATGAGCAAAAGAAATAAGCAAC‑G‑GGAAGT‑GAATAAGTGGAC‑AG‑A‑GAT‑TGTCGC‑TAATTTTACCGcc                                                                                                                                                                                          <  1:1034508/239‑1 (MQ=255)
                                                   tCGAAAAACATTGCCTTTCCCTGCTCTGGCCCAATATTCATTCTTATTTTCGCGTTAATTCACAAACTGTTAATTACATATTCACGGTGAAAAAAAATAAAAAACCAAATTTTTGGTGGTAGTTTGGGGC‑GGT‑G‑AATTTTTCAAGAAAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGAAAC‑A‑GGCAGT‑GAATAAGTTGAA‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCa                                                                                                                                                                                         <  2:159431/239‑1 (MQ=255)
                                                       aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTTCAGACAAATA‑AAAAAAATGGAGTTGCCATGATTAGCGGAAGTAAAAAAAAAC‑A‑AGAAGA‑GAATAATCTGAC‑AG‑A‑GGA‑TGTCGC‑GACAATTACCGCCATTAt                                                                                                                                                                                     >  1:673571/1‑239 (MQ=255)
                                                         aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTTTACACAAATA‑AAAAAAATGGGGATTTCCTGATGAGAGAAAGTAATAAACAAA‑A‑AGCAAG‑GAAAAAATTGAC‑AG‑A‑GAG‑TTTTCC‑TAACTTTTCCGCACTGAttt                                                                                                                                                                                   >  1:1369101/1‑239 (MQ=255)
                                                         aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTTCAGGAAAATA‑TAAAAAAAGGAGGTGCCCTGTTGTGGGGAAGGAATAAACAAA‑A‑GGAAAA‑GGAAAAAGTGAC‑AG‑G‑GAT‑TGTCGC‑TAAATTTACCCCCCTAAttt                                                                                                                                                                                   >  1:113305/1‑239 (MQ=255)
                                                              tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGG‑AATTTTTCCA‑ACACAAA‑CAAAAACTGGAGTTTGCATGGTGGGGGGAAGGAATAAGTAAC‑A‑AGCAGA‑GAAAAAGTTGTA‑AG‑A‑GGT‑TGTCGC‑Taaactctacgcaccaattttcta                                                                                                                                                                               >  2:68787/1‑217 (MQ=255)
                                                                 cATTCCCTGCTCTGGCGAAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTGGTGGC‑GGT‑A‑AATTTTTCCAGAAAAATA‑AAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGT‑TAACTTTACCGCCATGATTTCTACCCGa                                                                                                                                                                           <  1:817567/239‑1 (MQ=255)
                                                                     cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑gg                                                                                                                                                                                                                                         <  1:129546/179‑1 (MQ=255)
                                                                     cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AAATTTTTCTGACACAAA‑CAAAAAAATGAGGTGGCATGATGAGGGGAAGAAAAAAACAAA‑A‑AGCAGT‑GGAAAAGTTGAA‑CA‑A‑GGA‑TGTTGG‑CAACTTTACCGCCCCGATTTCTTCCCCaaaa                                                                                                                                                                        >  2:1211880/1‑236 (MQ=255)
                                                                               gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTTCTAACAAAAA‑AAAAAAATGGGGTTGGCATGATGAGGGGAAATAAAAAAAAACAA‑GACAG‑‑GAATAAGTTGACAAG‑A‑GAT‑TGTGGT‑GAACTTTCCGCCCAGAATTTTTACCGCAAT‑GCGTG‑TGACgg                                                                                                                                                            >  2:638215/1‑238 (MQ=255)
                                                                                cgaaaTATTAATTTTTATTTTCGGGTTAATTAAGAAACTTTTAATTACATTTTCACGGTGGAAAAAAATATAAAACCAAATTTTTAGTGGTAGTTTGTGGC‑GGT‑A‑AATTTTTCCAGAAAAAAA‑AAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGAAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACgt                                                                                                                                                            <  2:1369101/235‑1 (MQ=255)
                                                                                 gcAATATTAATTCTTATTTTCATGTGGATTCACGCACTGTTATTTACATACTCCCGGTGTAAAAAAATAAAAAACCACTTTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTCCCAGGATGAGGGAAAGTAATAAGCAAC‑T‑GGCAGT‑GAAAAGGTTGGC‑AG‑C‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACgtg                                                                                                                                                           <  1:874948/238‑1 (MQ=255)
                                                                                 gaaaTATTATTTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGAAAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAATTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACgtg                                                                                                                                                           <  2:261785/236‑1 (MQ=255)
                                                                                     tatTCATTCTTTTTTTCGCGTTGATTCACTAACTGTTAATTACATATTCACGGTGGAAAAAAATATAAACCCACATTTTTAGTGTTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACGGGAGTTGCAATGATGAGGAAAAGTAATAAGCAAC‑A‑GGCAGT‑AAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTCCCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGa                                                                                                                                                      <  1:28355/239‑1 (MQ=255)
                                                                                     tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGAGGAGCGAAAGTAAAAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGa                                                                                                                                                      <  1:977525/239‑1 (MQ=255)
                                                                                     tatTCATTCTTATTTACGCGTTGATTCACGACCTGTTAATTACATAGTCACGGTGGAAAAAAATATAAACCCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAACA‑CAAAAATTGGAGTTGCCATGAGGAGCGAAAGTAATAACCAAC‑A‑GGCAGT‑GAATAAGTTGAA‑AG‑A‑GAT‑TGTCCA‑TAATTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGa                                                                                                                                                      <  1:777044/239‑1 (MQ=255)
                                                                                       ttcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTTTCGACAAAAA‑CAAAAACAAGAGTTGCCATGATGAGGGGAAGAAAAAAACAAA‑A‑GGAAGA‑GAAAAAGATGAA‑AG‑A‑GAA‑TGTCGC‑TAACATTTCCGCCATAATTTTTACACGCAT‑GTCGCATGAGGTGGTGGGTa                                                                                                                                                    >  2:28355/1‑239 (MQ=255)
                                                                                               tATTTTCGCTTTGATTCACGAACTGTTAATTACATATTCACGGTGACAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAAACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGT‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                            <  1:1211880/239‑1 (MQ=255)
                                                                                                 ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTTCAGACAAAAA‑CAAAAAATGGAGGTGTCATGATGAGCGGAAGAAATAAACAAC‑A‑AACAGA‑GAATAAATTGAC‑AG‑A‑GAT‑TGTCGCGTAAATTT‑CCCCCCTGATTTTTACCCCAAA‑AGCTGATGACGTTGTGGGGAAAATAAAACa                                                                                                                                          >  2:731558/1‑239 (MQ=255)
                                                                                                 ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AAATTTTTCAAAAAAAAA‑AAAAAAATAGAGTTTGCATTATGAGGGAAAGGAAAAAAAAAA‑A‑GGGAGA‑GGAAAAATTGAA‑AA‑A‑AAG‑TGTTAG‑TAACATTACCGCCCATATTTTTACCCGGAA‑GGCTGATGTGGGGGGGGGTGAAATAAAACa                                                                                                                                          >  2:975011/1‑239 (MQ=255)
                                                                                                  tttCGCATGAATTAACGAATTTTAAATTAATTATAAAAGTTGGAAAAAAATAGAAAACCAAATTTTTAGTGGTATTTTGTGGA‑GGT‑A‑AATTTTTCCAGAAAAATA‑CAAAAACTGGAGTCGCAATGATGAGTGAATGTAATAAGCACC‑G‑GGAAGT‑GATTAATTTGAC‑AG‑A‑GTT‑TGGCCT‑TAACTTTCCCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAg                                                                                                                                         <  1:551818/239‑1 (MQ=255)
                                                                                                     ctgtttGATTCACGAACGTTTAATTACATATTCGCGGTGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGGGGC‑GGT‑A‑AATTTTCCCAGAAAAACA‑CAAAAACTGGATTGGCCATAATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAGGTGGAC‑GG‑A‑GAT‑TGCCGC‑TACCTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTa                                                                                                                                      <  1:1129549/235‑1 (MQ=255)
                                                                                                     cgcgTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTa                                                                                                                                      <  1:362532/239‑1 (MQ=255)
                                                                                                          gaatccgcGAATTTTTAATTAGATAGTGCCGGTGAAAAAAAATAAAAAACCACTGTTGTAGTGGTGGTTTGGGGC‑GGG‑G‑AATTTTGCCAAACAAATA‑AAAAAACGGGTGTTGCTATGACGAGCAAAATTAAAAAAAAAC‑A‑GGCAGT‑GAATAAGTAGAC‑AA‑A‑GAT‑TGTCGT‑TAACTTTCCCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTAGATAAACTAAAACAGCTAAAgg                                                                                                                                  <  2:1112907/231‑1 (MQ=255)
                                                                                                                      tGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGG‑G‑AAATTTTTCAGACAAATA‑AAAAAAATGGAGTTGGCATGATGAGCGAAAGTAATAAACAAC‑A‑AGCAGG‑GAATAAATTGAC‑AG‑A‑AAT‑TTTCGC‑TAACTTTAACGCCCTGATTTCTACCCCAAT‑GCCTGGTGACGTGGGGGGTAAACTAAAACAACTAAAGGGTGCCGAAAcgtc                                                                                                                     >  1:812328/1‑239 (MQ=255)
                                                                                                                        ttaattaaATATTCACGGTGGAAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                            <  1:1335734/214‑1 (MQ=255)
                                                                                                                        ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTTCAGACAAATA‑CAAAAAATGGAGTTTTCATGATGAGCGAAAGAAATAAGCAAC‑A‑CGCAGG‑GAATAAATTGAC‑AC‑A‑GAT‑TGTCGC‑CAACTTTACCGCCCTGATTTCTACCCCCAT‑GCCCGATGACGTGGTGGGGAAAACACAAAAGCTAAAGGGTACCGgaaagcgg                                                                                                                    >  2:599508/1‑233 (MQ=255)
                                                                                                                          aaTTAAATATACACGGTGGCAAAAAAAATAAACCCACATTTTTAGTGGTATTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAATTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGtcgtcg                                                                                                                 <  1:484347/239‑1 (MQ=255)
                                                                                                                             tacaattacACGGGGGAAAAAAAAAAAAACCCAAATTTTTAGTGGTAG‑TTGGGGG‑GGT‑GAAATTTTTCCAGAAAAAAA‑CAAAAACGGGGGTGGCTTGGATGAGCGAAAGAAATAAGCAAC‑G‑GGAAGT‑AAATAAGTTGAC‑AG‑A‑GAT‑GGTCGA‑TAATTTACCCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATg                                                                                                              <  2:592744/231‑1 (MQ=255)
                                                                                                                                atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTTCATACAAAAA‑CAAAAAAATGAGTTGCCATGGTGAGCGAAAAGAATAAACAAC‑A‑AGAAGT‑GAAAAAATTGAA‑AG‑A‑GAT‑TGTTGC‑TAAATTTACCGCCCTGATTTCTACCCGAAA‑TCCTGATGAAGTGGGGGATCAAAATAAACAGCTAAAGGAGTCCCAAAAATTGTCGGTgggg                                                                                                           >  1:1352722/1‑239 (MQ=255)
                                                                                                                                 tatTCACGGTGGAAAAAAATAAAAACCCACATTTTTAGTGGTAGTTTGTGGG‑GGT‑A‑AATTTTTCCAGAAAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGAAGT‑GAATAAGTGGAC‑AG‑A‑GAT‑TGTCGC‑TATCTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                          <  2:1241603/239‑1 (MQ=255)
                                                                                                                                 tatTCACGGGGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                          <  1:41850/239‑1 (MQ=255)
                                                                                                                                  atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AAATTTTTCCGACAAAAA‑CAAAAACAGGGGTTTCCATTGTGAGGGGAAGTAATAAACAAC‑A‑GGCAGT‑GAAAAAATTGAC‑AA‑A‑GAA‑TGTCGC‑TAACTTTACCCCCCTGATTTTTACCCCAAT‑TCCTGATTGAGGGGTGGGTAAACTAAAAAAACTCAAAGATTGCGAAACGTCCGCGATggggga                                                                                                         >  1:1241603/1‑237 (MQ=255)
                                                                                                                                  atTCACGGTGGCAAAAAAAATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAAAA‑CAAAAACTGGATTGGCCATGATGAGCAAAAGAAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGaa                                                                                                         <  1:294935/239‑1 (MQ=255)
                                                                                                                                   ttgaCGGTGGAAAAAAAAAAAAACCCAAATTATTATTGGTGATTGGTGGC‑GGA‑T‑AATTTTTCAAAACAAAAA‑AAAAAACTGGAGTGCCGATGATGAAAGAAATTAATAAGCAAC‑A‑GGCAGT‑TAATAAGTTGAC‑GG‑A‑GCT‑TGTCGA‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                          <  2:686643/234‑1 (MQ=255)
                                                                                                                                      agggtgaaaaaaaaTAAAAAACCACATTTTTGGTGGGAGTTTGTGGC‑GGT‑G‑AATTTTTACAGACAAATA‑CAAAAACGGGGGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GTT‑TGTCGC‑TAATTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt                                                                                                     <  2:1341638/231‑1 (MQ=255)
                                                                                                                                      aCGGTGGAAAAAAATATAAACCCACATTTTTAGTGGTAGTTTGTGGG‑GGT‑G‑AATTTTTCAAGAAAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt                                                                                                     <  2:812328/239‑1 (MQ=255)
                                                                                                                                      aCGGTGACAAAAAAGATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑ATTTTTACAAGAAAAAGA‑GAAAAACTGGGGGTGCTATGAGGGGGTAAAGTAATAAGCAAC‑A‑GGAAGG‑GAAAAAGTTGAA‑AG‑A‑GAT‑TGTCGC‑TAACTTTCCCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt                                                                                                     <  1:1244826/239‑1 (MQ=255)
                                                                                                                                       cGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTTCCCACAAAAA‑AAAAAAATGGAGTTGCCATGATGAGAGAAAGAAATAAACAAA‑A‑AGGAAT‑GAAAAAAATGAC‑AG‑A‑GAT‑TGTCGC‑TAAATTTACCGCCATGATTTTTACCCCAAT‑GCCCGATGACGTGGTGGGTAAAATAAAAAAGCTAAAGGAAGCCGAAAAGGCGTCGATGGGGGAAATTa                                                                                                    >  1:1067518/1‑239 (MQ=255)
                                                                                                                                        ggTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGC‑G‑AATTTTTCCAAAAAAAAA‑AAAAAAAATGGGGTGTCATTATGAGCGGAAAGAAAAAAAAAA‑A‑AACAAT‑GAAAAAATTGAC‑AG‑A‑GAA‑TGTCGC‑TCACATTTTCACCCTAATTTCTACCCCAAA‑GCCCGATGAGCGGGGGGTTAAAATCAAAAAAATAAACGATGCCGAAACGTCGCCGATGGGGAAAAatat                                                                                                   >  2:1182401/1‑239 (MQ=255)
                                                                                                                                         ttGGCAAAAAATATAAAACCACATTTTAAGTGGTATTTTTGGGC‑GGT‑G‑AATTTTACCAGACAAAAA‑CAAAAACTGGGGTTTCGTTGAGGAGCAAAAGTAATAACCAAC‑A‑GGCAGT‑AAATAAGTTGAC‑AG‑A‑GTT‑GGTGGC‑TAACTTTGCCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                                                   <  1:1128489/237‑1 (MQ=255)
                                                                                                                                         gTGGAAAAAAATAAAAACCCAAATTTTAAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGAAAAAAA‑CAAAAACGGGAGTGGCCATGATGAGCAAAAGAAATAAGCAAC‑A‑GGAATT‑AAATAAGTAGAC‑AG‑A‑GTT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                                                   <  1:638215/238‑1 (MQ=255)
                                                                                                                                          tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AAATTTTTCAGACAAAAA‑AAAAAAAAGGGGGTGCCATGGTGGGGGGAAGGAAAAAAAAAC‑A‑AGCAGG‑GAATAAGTTGTA‑AG‑A‑GAA‑TTTTGC‑TAAATTTTACCCCATCATTTTTTCCCCAATAGCCTG‑TGATGGGGGGGGTAAAATAAAACAACCAAAAGATGGCGCAACAGCGTCGGTGGGGGAAAatatta                                                                                                 >  2:1330359/1‑237 (MQ=255)
                                                                                                                                                  aaTATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGAAAC‑A‑GGAAGT‑AAATAAGTTGAC‑AG‑A‑GTT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                                         <  1:731558/239‑1 (MQ=255)
                                                                                                                                                  aaTATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTCCCAAACAAATA‑AAAAAACTGGAGTTGCAATGATGAGCGAAAGAAATAAGCAAC‑A‑GGCAGT‑AAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAATTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                                         <  1:36974/239‑1 (MQ=255)
                                                                                                                                                  aaTAAAAACCCAAATTTTTAGTGGTAGTTTGGGGG‑GGT‑A‑AATTTTCCCAGACAAATA‑AAAAAACGGGAGTGGCAATGATGAGAGAAATTAATAAGCAAC‑A‑GGCAGT‑AAATAAGTTGAA‑AG‑A‑GAT‑TGTCGT‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                                         <  2:1291049/239‑1 (MQ=255)
                                                                                                                                                  aaTAAAAAACCACATTTTTAGTGGTAGTTTGGGGC‑GGT‑A‑AATTTTCCCAGAAAAATA‑CAAAAACGGGAGTTGCCATGAGGAGCAAAAGTAATAAGCAAC‑G‑GGCAGT‑AAATAAGTTGAA‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                                         <  1:68787/239‑1 (MQ=255)
                                                                                                                                                    tataAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑Ag‑a‑ga                                                                                                                                                                                                                <  1:1393126/121‑1 (MQ=255)
                                                                                                                                                            cacaTTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTTCCGACAAATA‑AAAAAAATGGAGTTGTCATGATGGGCGGAAGAAATAAACAAC‑A‑AGCAGA‑GAAAAAAATGGC‑AA‑A‑GAT‑TGTCGC‑TAACTTTTCCCCCCTGATTTTTACCCGAAT‑GACTGATGACGTGGGGGGTAAACAAAAAAAACTAAAGGAAGCCGAAACGGCGTCGGTGGGGGAAAATATTTAACAAACGAAATTTGaca                                                                               >  2:127087/1‑239 (MQ=255)
                                                                                                                                                             acaTTTTTATTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑AAAAAACTGGAGTTGCAATGATGAGGGAAAGTAATAAGAAAC‑A‑GGCAGT‑GAATAGGTTAAG‑AG‑A‑GAT‑TGTCGT‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGacaa                                                                              <  1:1174881/239‑1 (MQ=255)
                                                                                                                                                             aaaTTTTGAGTGGTAGTTTGTGGC‑GGT‑A‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAATAAAAAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGacaa                                                                              <  1:487715/237‑1 (MQ=255)
                                                                                                                                                              caTTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTTCAGAAAAAAA‑CAAAAAAAGGAGGTGCCATGATGGGCGAAAGTAATAAACAAC‑A‑GGCAGA‑GAAAAAGTTGAC‑AG‑A‑GAT‑TGTGGC‑Taa                                                                                                                                                                                                    >  2:1393126/1‑121 (MQ=255)
                                                                                                                                                                           aGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACGGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                <  1:148146/239‑1 (MQ=255)
                                                                                                                                                                           aGTTTGTGGC‑GGT‑A‑AATTTTTCAAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAAAAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                <  1:76146/239‑1 (MQ=255)
                                                                                                                                                                            gTTGGTGGC‑GGT‑A‑AATTTTTCAAGAAAAATA‑AAAAAACTGGAGTGGCCATGATGAGCGAAAGTAATAATCAAC‑A‑GGCGGT‑AAATAAGTTGAA‑AG‑A‑GTT‑TGTCGT‑TACCTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                <  2:821929/238‑1 (MQ=255)
                                                                                                                                                                             gtgtgggtagtt‑G‑AATTTTGACAGAAAAATA‑AAAACACTGGATTTGCGAAGAGGAGCAAAAATGATAAGCAAC‑A‑TGCGGT‑GAAAAATTTAAC‑AG‑T‑AGT‑TGTCCA‑TAATTTTACCACCATGATTTCTACCCGCAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                <  1:1176372/227‑1 (MQ=255)
                                                                                                                                                                               tgtgGG‑GGT‑A‑AATTTTCCAAAAAAAATA‑AAAAAATGGGAGTTGCCATGAAGAGCGAAATAAATAAGCAAC‑A‑GGCGGT‑AAATAAGTTGAA‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGa                                                            <  2:1067518/239‑1 (MQ=255)
                                                                                                                                                                                ggggC‑GGT‑G‑AATTTTTCCAAAAAAATA‑AAAAAACGGGAGTTGCCATGATGAGCAAAAGAAATAAGCAAC‑A‑GGCAGT‑AAATAAGTGGAC‑AG‑A‑GAT‑TTTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAc                                                           <  2:764714/237‑1 (MQ=255)
                                                                                                                                                                                      ggT‑A‑AATTTTACAAGAAAAATA‑CAAAAACGGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑AAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGa                                                       <  2:398705/238‑1 (MQ=255)
                                                                                                                                                                                             aTTTTCCCAGACAAAGC‑CAAAAATTGGAGTTCCACTGTTGAGCGAAAGAAACAAGCAAC‑A‑GGCACT‑TAATAGGTGGAC‑AG‑A‑GAT‑TTCCGC‑TAACTGTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGACGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTc                                                 <  2:1148441/239‑1 (MQ=255)
                                                                                                                                                                                                tttCCAAAAAAAAA‑AAAAAACTGGATGTGCAATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑AAATAATGTGAA‑AG‑A‑GAT‑TGTCGC‑AAATTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg                                              <  1:975011/239‑1 (MQ=255)
                                                                                                                                                                                                   taaaaaaaaaaaaaaaaaTGGGGGTTGCAATGAGGAGCAAAAGTAAAAAGCAAA‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑TTT‑GGTCGT‑TATCTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctgcc                                            <  2:113305/226‑1 (MQ=255)
                                                                                                                                                                                                       aaaaaaa‑caaaaacTGGATTTGCCATAATGAGAAAAATAAAAAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GTT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCa                                       <  1:1314934/237‑1 (MQ=255)
                                                                                                                                                                                                       aaaaaaa‑caaaaacTGGAGTTGCCATGATGGGCGAAAGAAAAAAGCAAC‑G‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCa                                       <  1:38975/237‑1 (MQ=255)
                                                                                                                                                                                                       aaaaaTA‑CAAAAACTGACTTTCCCATGATGAGCGAAAGAAAAAAGCAAC‑A‑GG‑AGTGGAATAAGTT‑AC‑AG‑AGGAT‑TTCCGC‑TATTTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCa                                       <  2:1131393/237‑1 (MQ=255)
                                                                                                                                                                                                          aaTA‑AAAAAAGTAGATTTGACATGAGGAGCAAAAGTAATAAGCAAA‑A‑GGCAAT‑AAATGAGGGGAC‑AG‑A‑GAG‑GGATTC‑TAACTGTACCGCCATGATTTCTACCCGAAT‑GCCAGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGAGGTTCGACAACATGCAAAAAGCGATTGACCGGAATCGTCCTGCCTGTCAGGa                                    <  2:689243/239‑1 (MQ=255)
                                                                                                                                                                                                                 acactgggAGTTGCGATAATGACGAAAAGAAATAGTCACC‑T‑GGAATT‑AAATAGGTGGAC‑AG‑A‑GTT‑TGTCGC‑TACTTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgg                              <  2:1096056/233‑1 (MQ=255)
                                                                                                                                                                                                                   aaaggggatcgacagaatgaGGGAAAGTAAAAACAAAA‑A‑GGAAGT‑G‑ATGAATTG‑C‑AGAA‑GATGTGTTGC‑AAACTTTACCGCCATGATTTCTAATCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAAGCGTCCTGCCTGTCAGGACATCgggg                            <  2:14695/223‑1 (MQ=255)
                                                                                                                                                                                                                   aaCTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑TAT‑TGTCGA‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                            <  2:739830/239‑1 (MQ=255)
                                                                                                                                                                                                                        gAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACAGCCATGATTTCTACCCGAAT‑GCCCGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATCCAACAAGCGATTGACCTGAATACTCCTGCCTGTCAGGACACCTGGGAGAta                       >  2:767572/1‑238 (MQ=255)
                                                                                                                                                                                                                             gCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTc                                                                                                                                                                                  <  1:752411/80‑1 (MQ=255)
                                                                                                                                                                                                                             gCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGt                   >  1:100135/1‑238 (MQ=255)
                                                                                                                                                                                                                             gCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGt                   >  1:1068313/1‑238 (MQ=255)
                                                                                                                                                                                                                             gCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGAGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGt                   >  2:228097/1‑238 (MQ=255)
                                                                                                                                                                                                                              ccatgagagacaaaaGTAATAAGCAAC‑A‑GGCATT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGT‑AAACTTAACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGtt                  <  2:358918/226‑1 (MQ=255)
                                                                                                                                                                                                                              ccATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCg                               >  1:108414/1‑225 (MQ=255)
                                                                                                                                                                                                                                        cGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAg       >  2:830381/1‑239 (MQ=255)
                                                                                                                                                                                                                                           aaGTAATAAGCAAC‑A‑GGCAGT‑AAATAAGTTGAC‑AG‑A‑GTT‑TGTCTC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGt      <  2:36186/237‑1 (MQ=255)
                                                                                                                                                                                                                                            aGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCgg   >  1:750589/1‑239 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                      
CAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAC‑A‑GGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGT  >  NC_000913/3206241‑3206712

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑