Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,206,504 C→A 15.8% T15K (ACA→AAA)  ttdA → L‑tartrate dehydratase, alpha subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,206,5040CA15.8% 266.0 / 9.7 134T15K (ACA→AAA) ttdAL‑tartrate dehydratase, alpha subunit
Reads supporting (aligned to +/- strand):  ref base C (38/71);  new base A (12/11);  total (50/84)
Fisher's exact test for biased strand distribution p-value = 1.56e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 134 total aligned reads displayed.

GCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCGAGCTGC  >  NC_000913/3206267‑3206740
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                  
gCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑a                                                                                                                                                                                                                                                  <  1:230324/239‑1 (MQ=255)
     tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑Ag‑a‑ga                                                                                                                                                                                                                                            <  1:319244/238‑1 (MQ=255)
          tAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCg                                                                                                                                                                                                                                     <  2:443225/239‑1 (MQ=255)
          tAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATGCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTc                                                                                                                                                                                                                                      <  1:717129/238‑1 (MQ=255)
              cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTTTAGACAAATA‑CAAAAAAT‑GGAGTTGTCCTTGTGAGCGGAAGT‑AAAAAAAAAA‑AAGCAAC‑GAAAAAGATTAA‑AG‑A‑GAT‑TGTGGcgca                                                                                                                                                                                                                                 >  2:76146/1‑236 (MQ=255)
                   tgtATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AAATTTTTCAGAAAAAAATAAAAAATT‑GGGGTTG‑CATGATTAGCGGAAGA‑AATAAACAAA‑AGGAAGT‑GAATAAGATTAA‑AG‑A‑AAT‑TGTCGC‑TAACtttt                                                                                                                                                                                                                           >  1:345641/1‑238 (MQ=255)
                        ttCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑CATTTTTTCCTAAACAAC‑AAAAAAAA‑GGGGGTGTCACAATGAGGGCAAGT‑AATAAACCAC‑AAGCAAC‑GGAAAACTTGTC‑AG‑C‑GAT‑TGTCGG‑CCACTTTAcccc                                                                                                                                                                                                                       >  2:297075/1‑236 (MQ=255)
                         tCGAAAAACATTGCCTTTCCCTGCTCTGGCCCAATATTCATTCTTATTTTCGCGTTAATTCACAAACTGTTAATTACATATTCACGGTGAAAAAAAATAAAAAACCAAATTTTTGGTGGTAGTTTGGGGCGGT‑G‑AATTTTTCAAGAAAAATA‑CAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGAAAC‑AGGCAGT‑GAATAAGTTGAA‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCa                                                                                                                                                                                                                     <  2:159431/239‑1 (MQ=255)
                             aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTTCAGACAAATA‑AAAAAAAT‑GGAGTTGCCATGATTAGCGGAAGT‑AAAAAAAAAC‑AAGAAGA‑GAATAATCTGAC‑AG‑A‑GGA‑TGTCGC‑GACAATTACCGCCATTAt                                                                                                                                                                                                                 >  1:673571/1‑239 (MQ=255)
                               aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTTCAGGAAAATA‑TAAAAAAA‑GGAGGTGCCCTGTTGTGGGGAAGG‑AATAAACAAA‑AGGAAAA‑GGAAAAAGTGAC‑AG‑G‑GAT‑TGTCGC‑TAAATTTACCCCCCTAAttt                                                                                                                                                                                                               >  1:113305/1‑239 (MQ=255)
                                    tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGG‑AATTTTTCCA‑ACACAAA‑CAAAAACT‑GGAGTTTGCATGGTGGGGGGAAGG‑AATAAGTAAC‑AAGCAGA‑GAAAAAGTTGTA‑AG‑A‑GGT‑TGTCGC‑Taaactctacgcaccaattttcta                                                                                                                                                                                                           >  2:68787/1‑217 (MQ=255)
                                       cATTCCCTGCTCTGGCGAAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTGGTGGCGGT‑A‑AATTTTTCCAGAAAAATA‑AAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGT‑TAACTTTACCGCCATGATTTCTACCCGa                                                                                                                                                                                                       <  1:817567/239‑1 (MQ=255)
                                           cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AAATTTTTCTGACACAAA‑CAAAAAAA‑TGAGGTGGCATGATGAGGGGAAGA‑AAAAAACAAA‑AAGCAGT‑GGAAAAGTTGAA‑CA‑A‑GGA‑TGTTGG‑CAACTTTACCGCCCCGATTTCTTCCCCaaaa                                                                                                                                                                                                    >  2:1211880/1‑236 (MQ=255)
                                                ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTTCAGACAAAAA‑CAAAAACA‑GGAGTTGTCACGGTGGGCGAAAGT‑AAAAAGCAAC‑ACGCAGG‑GAAAAAATTGTC‑AG‑A‑AAA‑TGTCGC‑TAACTTTACCACCCCGATTTCTACCCGACA‑GCCtgat                                                                                                                                                                                             >  2:487715/1‑239 (MQ=255)
                                                     gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTTCTAACAAAAA‑AAAAAAAT‑GGGGTTGGCATGATGAGGGGAAAT‑AAAAAAAAACAAGACAG‑‑GAATAAGTTGACAAG‑A‑GAT‑TGTGGT‑GAACTTTCCGCCCAGAATTTTTACCGCAAT‑GCGTG‑TGACgg                                                                                                                                                                                        >  2:638215/1‑238 (MQ=255)
                                                       gcAATATTAATTCTTATTTTCATGTGGATTCACGCACTGTTATTTACATACTCCCGGTGTAAAAAAATAAAAAACCACTTTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACT‑GGAGTTCCCAGGATGAGGGAAAGT‑AATAAGCAAC‑TGGCAGT‑GAAAAGGTTGGC‑AG‑C‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACgtg                                                                                                                                                                                       <  1:874948/238‑1 (MQ=255)
                                                       gaaaTATTATTTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAGAAAAATA‑CAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAATTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACgtg                                                                                                                                                                                       <  2:261785/236‑1 (MQ=255)
                                                           tatTCATTCTTTTTTTCGCGTTGATTCACTAACTGTTAATTACATATTCACGGTGGAAAAAAATATAAACCCACATTTTTAGTGTTAGTTTGTGGCGGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACG‑GGAGTTGCAATGATGAGGAAAAGT‑AATAAGCAAC‑AGGCAGT‑AAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTCCCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGa                                                                                                                                                                                  <  1:28355/239‑1 (MQ=255)
                                                           tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑GATTTTTTCAGACAAAAA‑AAAAAAAT‑GGAGTTGTCATGATGAGGGGAAAT‑AAAAAACAAA‑AAGGAGG‑GAAAAAGATGAC‑CG‑A‑GAA‑TGTCGC‑TAACTTTACCGCCATGAATTTTACCCCTAT‑GCCTGAGGACGGGGTGGa                                                                                                                                                                                  >  2:372883/1‑239 (MQ=255)
                                                           tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TACCTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACgtg                                                                                                                                                                                       <  1:1346673/234‑1 (MQ=255)
                                                           tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGA‑G‑AAATTTTTCACAAAAATA‑AAAAAAAT‑GGGGTTGTCATAGTGGGCGTGAGT‑AAAAAGAAAA‑AAGAAAA‑GAATAAAATTTC‑AG‑A‑GAT‑ATTTGC‑TAAAATTATCCCCCTGCATTTTACCCCAAT‑GTCtgatgagaggtggga                                                                                                                                                                                  >  1:739830/1‑230 (MQ=255)
                                                           tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACT‑GGAGTTGCCATGAGGAGCGAAAGT‑AAAAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGa                                                                                                                                                                                  <  1:977525/239‑1 (MQ=255)
                                                           tatTCATTCTTATTTACGCGTTGATTCACGACCTGTTAATTACATAGTCACGGTGGAAAAAAATATAAACCCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAGACAAACA‑CAAAAATT‑GGAGTTGCCATGAGGAGCGAAAGT‑AATAACCAAC‑AGGCAGT‑GAATAAGTTGAA‑AG‑A‑GAT‑TGTCCA‑TAATTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGa                                                                                                                                                                                  <  1:777044/239‑1 (MQ=255)
                                                                     tATTTTCGGTTTGTTTCACGAAAGGTAAATTACATATTCAGGGTGTAAAAAAATATAAAACCACATTTTTAGTGGGAGTTTGTGGGGGT‑A‑AATTTTCCCAGACAAATA‑AAAAAACG‑GGAGTTGCCAAGATGAGC‑AAAGTAAAAAAGCAAA‑AGGCGGT‑AAATAAGTTGAC‑AG‑A‑GAT‑TGTCGT‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                                                        <  2:303189/239‑1 (MQ=255)
                                                                     tATTTGCGGGTTAATTCACGAACTTTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACTTTTTTAGTGGTAGTTGGTGGGGGT‑A‑AATTTTTCCAGAAAAAAA‑CAAAAACG‑GGATTTGCCATGAGGAGCGAAAGT‑AATAAGAAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                                                        <  1:782590/239‑1 (MQ=255)
                                                                       ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTTCAGACAAAAA‑CAAAAAAT‑GGAGGTGTCATGATGAGCGGAAGA‑AATAAACAAC‑AAACAGA‑GAATAAATTGAC‑AG‑A‑GAT‑TGTCGCGTAAATTT‑CCCCCCTGATTTTTACCCCAAA‑AGCTGATGACGTTGTGGGGAAAATAAAACa                                                                                                                                                                      >  2:731558/1‑239 (MQ=255)
                                                                       ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AAATTTTTCAAAAAAAAA‑AAAAAAAT‑AGAGTTTGCATTATGAGGGAAAGG‑AAAAAAAAAA‑AGGGAGA‑GGAAAAATTGAA‑AA‑A‑AAG‑TGTTAG‑TAACATTACCGCCCATATTTTTACCCGGAA‑GGCTGATGTGGGGGGGGGTGAAATAAAACa                                                                                                                                                                      >  2:975011/1‑239 (MQ=255)
                                                                        tttCGCATGAATTAACGAATTTTAAATTAATTATAAAAGTTGGAAAAAAATAGAAAACCAAATTTTTAGTGGTATTTTGTGGAGGT‑A‑AATTTTTCCAGAAAAATA‑CAAAAACT‑GGAGTCGCAATGATGAGTGAATGT‑AATAAGCACC‑GGGAAGT‑GATTAATTTGAC‑AG‑A‑GTT‑TGGCCT‑TAACTTTCCCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAg                                                                                                                                                                     <  1:551818/239‑1 (MQ=255)
                                                                           ctgtttGATTCACGAACGTTTAATTACATATTCGCGGTGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGGGGCGGT‑A‑AATTTTCCCAGAAAAACA‑CAAAAACT‑GGATTGGCCATAATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAGGTGGAC‑GG‑A‑GAT‑TGCCGC‑TACCTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTa                                                                                                                                                                  <  1:1129549/235‑1 (MQ=255)
                                                                           cgcgTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTa                                                                                                                                                                  <  1:362532/239‑1 (MQ=255)
                                                                                gaatccgcGAATTTTTAATTAGATAGTGCCGGTGAAAAAAAATAAAAAACCACTGTTGTAGTGGTGGTTTGGGGCGGG‑G‑AATTTTGCCAAACAAATA‑AAAAAACG‑GGTGTTGCTATGACGAGCAAAATT‑AAAAAAAAAC‑AGGCAGT‑GAATAAGTAGAC‑AA‑A‑GAT‑TGTCGT‑TAACTTTCCCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTAGATAAACTAAAACAGCTAAAgg                                                                                                                                                              <  2:1112907/231‑1 (MQ=255)
                                                                                              ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTTCAGACAAATA‑CAAAAAAT‑GGAGTTTTCATGATGAGCGAAAGA‑AATAAGCAAC‑ACGCAGG‑GAATAAATTGAC‑AC‑A‑GAT‑TGTCGC‑CAACTTTACCGCCCTGATTTCTACCCCCAT‑GCCCGATGACGTGGTGGGGAAAACACAAAAGCTAAAGGGTACCGgaaagcgg                                                                                                                                                >  2:599508/1‑233 (MQ=255)
                                                                                              ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGC‑C‑AATTTTTTTAGAAAAAAG‑CAAAAAATCTGGTTTGGCAAG‑TGGATGTAAGG‑GAAAAACAAG‑AGGCCGT‑GTATAAGTTATA‑AG‑T‑AAT‑TGTCGG‑AAAGTTTTACACCATGATTTCTCCGCCCAA‑GCCTCATGACGTGGTGGTTAAACTAAAAAAACCAAACGATgggcaaacgccg                                                                                                                                                >  2:1244826/1‑227 (MQ=255)
                                                                                                aaTTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑GATTTTTTCTAACAAATA‑CAAAAAAT‑TGAGTTGCCATGATGAGGGAAAGA‑AATAAGAAAA‑AAGGAAT‑GAATAAAATTAA‑AG‑A‑GAT‑TGGCGC‑CAACCTTACAGCCATGATTTTTACCCGAAT‑GCCTGATTACGGGGTGGGAAAACTAAAAAAACTAAAGGATGCCGaaaaactgtcg                                                                                                                                             >  1:904245/1‑231 (MQ=255)
                                                                                                aaTTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTTCAGACAAATA‑CAAAAACT‑GGGGGTTCCCTGATGAGAGAAAAG‑AATAAACAAC‑AAGCAGT‑GAATAAATTGAC‑AG‑A‑GAT‑TTTCGC‑TTACTTTACCCCCCTGATTTTTTCCCCCAT‑GCCCGATGACGTGGGGGGTAAACTCAAAAAGCTAAAAGATTCCGAAACctcgtc                                                                                                                                              >  1:398705/1‑238 (MQ=255)
                                                                                                   tacaattacACGGGGGAAAAAAAAAAAAACCCAAATTTTTAGTGGTAG‑TTGGGGGGGT‑GAAATTTTTCCAGAAAAAAA‑CAAAAACG‑GGGGTGGCTTGGATGAGCGAAAGA‑AATAAGCAAC‑GGGAAGT‑AAATAAGTTGAC‑AG‑A‑GAT‑GGTCGA‑TAATTTACCCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATg                                                                                                                                          <  2:592744/231‑1 (MQ=255)
                                                                                                      atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTTCATACAAAAA‑CAAAAAAA‑TGAGTTGCCATGGTGAGCGAAAAG‑AATAAACAAC‑AAGAAGT‑GAAAAAATTGAA‑AG‑A‑GAT‑TGTTGC‑TAAATTTACCGCCCTGATTTCTACCCGAAA‑TCCTGATGAAGTGGGGGATCAAAATAAACAGCTAAAGGAGTCCCAAAAATTGTCGGTgggg                                                                                                                                       >  1:1352722/1‑239 (MQ=255)
                                                                                                       tatTCACGGGGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                                                      <  1:41850/239‑1 (MQ=255)
                                                                                                        atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AAATTTTTTATAAAAAAA‑CACAAAAT‑GGAGTTTTCATGAGGAGGGAAAAT‑AATAAACAAA‑CAGCAGA‑GAATAAGTTGAA‑CG‑A‑GAT‑TGTCGC‑TAAATTTAACCCCATGATTTTTATCCGAAT‑GCCTCGTTAAGTGGGGGGTAAACTAAAACAGCTAAACGAAGCCCAAAccaagtacattgggga                                                                                                                                     >  2:1128489/1‑224 (MQ=255)
                                                                                                        atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AAATTTTTCCGACAAAAA‑CAAAAACA‑GGGGTTTCCATTGTGAGGGGAAGT‑AATAAACAAC‑AGGCAGT‑GAAAAAATTGAC‑AA‑A‑GAA‑TGTCGC‑TAACTTTACCCCCCTGATTTTTACCCCAAT‑TCCTGATTGAGGGGTGGGTAAACTAAAAAAACTCAAAGATTGCGAAACGTCCGCGATggggga                                                                                                                                     >  1:1241603/1‑237 (MQ=255)
                                                                                                        atTCACGGTGGCAAAAAAAATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAGACAAAAA‑CAAAAACT‑GGATTGGCCATGATGAGCAAAAGA‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGaa                                                                                                                                     <  1:294935/239‑1 (MQ=255)
                                                                                                         ttgaCGGTGGAAAAAAAAAAAAACCCAAATTATTATTGGTGATTGGTGGCGGA‑T‑AATTTTTCAAAACAAAAA‑AAAAAACT‑GGAGTGCCGATGATGAAAGAAATT‑AATAAGCAAC‑AGGCAGT‑TAATAAGTTGAC‑GG‑A‑GCT‑TGTCGA‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                                                      <  2:686643/234‑1 (MQ=255)
                                                                                                            agggtgaaaaaaaaTAAAAAACCACATTTTTGGTGGGAGTTTGTGGCGGT‑G‑AATTTTTACAGACAAATA‑CAAAAACG‑GGGGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GTT‑TGTCGC‑TAATTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt                                                                                                                                 <  2:1341638/231‑1 (MQ=255)
                                                                                                            aCGGTGGAAAAAAATATAAACCCACATTTTTAGTGGTAGTTTGTGGGGGT‑G‑AATTTTTCAAGAAAAATA‑CAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt                                                                                                                                 <  2:812328/239‑1 (MQ=255)
                                                                                                            aCGGTGACAAAAAAGATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑ATTTTTACAAGAAAAAGA‑GAAAAACT‑GGGGGTGCTATGAGGGGGTAAAGT‑AATAAGCAAC‑AGGAAGG‑GAAAAAGTTGAA‑AG‑A‑GAT‑TGTCGC‑TAACTTTCCCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt                                                                                                                                 <  1:1244826/239‑1 (MQ=255)
                                                                                                             cGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTTCCCACAAAAA‑AAAAAAAT‑GGAGTTGCCATGATGAGAGAAAGA‑AATAAACAAA‑AAGGAAT‑GAAAAAAATGAC‑AG‑A‑GAT‑TGTCGC‑TAAATTTACCGCCATGATTTTTACCCCAAT‑GCCCGATGACGTGGTGGGTAAAATAAAAAAGCTAAAGGAAGCCGAAAAGGCGTCGATGGGGGAAATTa                                                                                                                                >  1:1067518/1‑239 (MQ=255)
                                                                                                              ggTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGC‑G‑AATTTTTCCAAAAAAAAA‑AAAAAAAA‑TGGGGTGTCATTATGAGCGGAAAG‑AAAAAAAAAA‑AAACAAT‑GAAAAAATTGAC‑AG‑A‑GAA‑TGTCGC‑TCACATTTTCACCCTAATTTCTACCCCAAA‑GCCCGATGAGCGGGGGGTTAAAATCAAAAAAATAAACGATGCCGAAACGTCGCCGATGGGGAAAAatat                                                                                                                               >  2:1182401/1‑239 (MQ=255)
                                                                                                               ttGGCAAAAAATATAAAACCACATTTTAAGTGGTATTTTTGGGCGGT‑G‑AATTTTACCAGACAAAAA‑CAAAAACT‑GGGGTTTCGTTGAGGAGCAAAAGT‑AATAACCAAC‑AGGCAGT‑AAATAAGTTGAC‑AG‑A‑GTT‑GGTGGC‑TAACTTTGCCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                                                                               <  1:1128489/237‑1 (MQ=255)
                                                                                                               gTGGAAAAAAATATAAAACCACATGTTTAGTGGTAGTTTGTGGGGTT‑A‑AATTTTTCCAAAAAAATA‑CAAAAACT‑GGAGTGGCAATGAGGAGTGAAATT‑AAAAAGCACC‑AGGAAGA‑AAATAATTTGAC‑AG‑G‑AAT‑TGTCGC‑TAATTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                                                                               <  1:709548/238‑1 (MQ=255)
                                                                                                                tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AAATTTTTCAGACAAAAA‑AAAAAAAA‑GGGGGTGCCATGGTGGGGGGAAGG‑AAAAAAAAAC‑AAGCAGG‑GAATAAGTTGTA‑AG‑A‑GAA‑TTTTGC‑TAAATTTTACCCCATCATTTTTTCCCCAATAGCCTG‑TGATGGGGGGGGTAAAATAAAACAACCAAAAGATGGCGCAACAGCGTCGGTGGGGGAAAatatta                                                                                                                             >  2:1330359/1‑237 (MQ=255)
                                                                                                                      aaaggaaaacacgaaatttagaGTGGTAGTTGGTGGCAGT‑A‑TATTTTTCAAGACAAAAA‑CAAAAACT‑GGGTTTGCCAGTATGAGCGAAAGA‑AATAACCAAC‑AGGCAGG‑GAATAAGTTGAC‑AG‑A‑GGT‑GGTCGC‑AAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATa                                                                                                                       <  2:240694/218‑1 (MQ=255)
                                                                                                                      aaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAAAAAAATA‑CAAAAACT‑GGATTGGCCATTATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATa                                                                                                                       <  1:372883/239‑1 (MQ=255)
                                                                                                                        aaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGAAAC‑AGGAAGT‑AAATAAGTTGAC‑AG‑A‑GTT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                                                                     <  1:731558/239‑1 (MQ=255)
                                                                                                                        aaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTCCCAAACAAATA‑AAAAAACT‑GGAGTTGCAATGATGAGCGAAAGA‑AATAAGCAAC‑AGGCAGT‑AAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAATTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                                                                     <  1:36974/239‑1 (MQ=255)
                                                                                                                        aaTAAAAACCCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑ATTTTTCCCAGACAAAAA‑AAAAAACG‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGAAAC‑AGGCGGT‑AAATAAGTTGAC‑AG‑A‑GTT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                                                                     <  2:1352722/239‑1 (MQ=255)
                                                                                                                        aaTAAAAACCCAAATTTTTAGTGGTAGTTTGGGGGGGT‑A‑AATTTTCCCAGACAAATA‑AAAAAACG‑GGAGTGGCAATGATGAGAGAAATT‑AATAAGCAAC‑AGGCAGT‑AAATAAGTTGAA‑AG‑A‑GAT‑TGTCGT‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                                                                     <  2:1291049/239‑1 (MQ=255)
                                                                                                                        aaTAAAAAACCACATTTTTAGTGGTAGTTTGGGGCGGT‑A‑AATTTTCCCAGAAAAATA‑CAAAAACG‑GGAGTTGCCATGAGGAGCAAAAGT‑AATAAGCAAC‑GGGCAGT‑AAATAAGTTGAA‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                                                                     <  1:68787/239‑1 (MQ=255)
                                                                                                                          tataAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑Ag‑a‑ga                                                                                                                                                                                                                                            <  1:1393126/121‑1 (MQ=255)
                                                                                                                                  cacaTTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTTCCGACAAATA‑AAAAAAAT‑GGAGTTGTCATGATGGGCGGAAGA‑AATAAACAAC‑AAGCAGA‑GAAAAAAATGGC‑AA‑A‑GAT‑TGTCGC‑TAACTTTTCCCCCCTGATTTTTACCCGAAT‑GACTGATGACGTGGGGGGTAAACAAAAAAAACTAAAGGAAGCCGAAACGGCGTCGGTGGGGGAAAATATTTAACAAACGAAATTTGaca                                                                                                           >  2:127087/1‑239 (MQ=255)
                                                                                                                                   acaTTTTTATTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAGACAAATA‑AAAAAACT‑GGAGTTGCAATGATGAGGGAAAGT‑AATAAGAAAC‑AGGCAGT‑GAATAGGTTAAG‑AG‑A‑GAT‑TGTCGT‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGacaa                                                                                                          <  1:1174881/239‑1 (MQ=255)
                                                                                                                                   aaaTTTTGAGTGGTAGTTTGTGGCGGT‑A‑AATTTTTCCAGACAAATA‑CAAAAACT‑GGAGTTGCCATGATGAGCGAAATA‑AAAAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGacaa                                                                                                          <  1:487715/237‑1 (MQ=255)
                                                                                                                                    caTTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTTCAGAAAAAAA‑CAAAAAAA‑GGAGGTGCCATGATGGGCGAAAGT‑AATAAACAAC‑AGGCAGA‑GAAAAAGTTGAC‑AG‑A‑GAT‑TGTGGC‑Taa                                                                                                                                                                                                                                >  2:1393126/1‑121 (MQ=255)
                                                                                                                                                 aattggtgGCGGT‑A‑AATTTTTCAGGCAAAACA‑AAAAAACT‑GGATTTCCCATGATGAGCCAAAGT‑AATAAGCACC‑AGGCGGT‑GAATAAGTGGAC‑AG‑T‑GTT‑GCTCGC‑TATCTTTGCCGCCATGATTTCTACCCGAAT‑GCCTGATGTCGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                                            <  1:758974/234‑1 (MQ=255)
                                                                                                                                                 aGTTTGTGGCGGT‑A‑AATTTTTCAAGACAAATA‑CAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AAAAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                                            <  1:76146/239‑1 (MQ=255)
                                                                                                                                                  gtgtgggtagtt‑G‑AATTTTGACAGAAAAATA‑AAAACACT‑GGATTTGCGAAGAGGAGCAAAAAT‑GATAAGCAAC‑ATGCGGT‑GAAAAATTTAAC‑AG‑T‑AGT‑TGTCCA‑TAATTTTACCACCATGATTTCTACCCGCAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                                            <  1:1176372/227‑1 (MQ=255)
                                                                                                                                                  gTTTGTGGGGGG‑A‑AATTTTTCCAGAAAAATA‑CAAAACCT‑GAAGTTGCCAGAATGGGCGAAAAT‑AATAAGCAAC‑AGGAAGT‑GAATAAGTGGAC‑AG‑G‑GAT‑TGTCGC‑TAATTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                                            <  1:1182401/238‑1 (MQ=255)
                                                                                                                                                  gTTGGTGGCGGT‑A‑AATTTTTCAAGAAAAATA‑AAAAAACT‑GGAGTGGCCATGATGAGCGAAAGT‑AATAATCAAC‑AGGCGGT‑AAATAAGTTGAA‑AG‑A‑GTT‑TGTCGT‑TACCTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                                            <  2:821929/238‑1 (MQ=255)
                                                                                                                                                     tgtgGGGGT‑A‑AATTTTCCAAAAAAAATA‑AAAAAATG‑GGAGTTGCCATGAAGAGCGAAATA‑AATAAGCAAC‑AGGCGGT‑AAATAAGTTGAA‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGa                                                                                        <  2:1067518/239‑1 (MQ=255)
                                                                                                                                                      ggggCGGT‑G‑AATTTTTCCAAAAAAATA‑AAAAAACG‑GGAGTTGCCATGATGAGCAAAAGA‑AATAAGCAAC‑AGGCAGT‑AAATAAGTGGAC‑AG‑A‑GAT‑TTTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAc                                                                                       <  2:764714/237‑1 (MQ=255)
                                                                                                                                                           ggT‑A‑AATTTTACAAGAAAAATA‑CAAAAACG‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑AAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGa                                                                                   <  2:398705/238‑1 (MQ=255)
                                                                                                                                                                  aTTTTCCCAGACAAAGC‑CAAAAATT‑GGAGTTCCACTGTTGAGCGAAAGA‑AACAAGCAAC‑AGGCACT‑TAATAGGTGGAC‑AG‑A‑GAT‑TTCCGC‑TAACTGTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGACGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTc                                                                             <  2:1148441/239‑1 (MQ=255)
                                                                                                                                                                     tttCCAAACAAATA‑AAAAAACT‑GGAGTTGCCATGATGAGAGAAAGT‑AATAAGCAAC‑AGGAAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg                                                                          <  1:1379660/239‑1 (MQ=255)
                                                                                                                                                                     ttacaaGAAAAAGA‑CAAAATCG‑GGAGTTGCCAGGATGAACGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAAAAAGTTGAC‑GG‑A‑GAT‑TGTGGT‑TATCTTAACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg                                                                          <  1:297075/234‑1 (MQ=255)
                                                                                                                                                                            tataagagacaaagCT‑GGAGTTGCCATGAGGAGAAAAAGA‑AAAAAGCAAC‑AGGCAGT‑AAATAAGTTGAG‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGt                                                                     <  2:108414/228‑1 (MQ=255)
                                                                                                                                                                            aaaaaaa‑caaaaacT‑GGATTTGCCATAATGAGAAAAATA‑AAAAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GTT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCa                                                                   <  1:1314934/237‑1 (MQ=255)
                                                                                                                                                                            aaaaaaa‑caaaaacT‑GGAGTTGCCATGATGGGCGAAAGA‑AAAAAGCAAC‑GGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCa                                                                   <  1:38975/237‑1 (MQ=255)
                                                                                                                                                                            aaaaaTA‑CAAAAACT‑GACTTTCCCATGATGAGCGAAAGA‑AAAAAGCAAC‑AGG‑AGTGGAATAAGTT‑AC‑AG‑AGGAT‑TTCCGC‑TATTTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCa                                                                   <  2:1131393/237‑1 (MQ=255)
                                                                                                                                                                               aaTA‑AAAAAAGT‑AGATTTGACATGAGGAGCAAAAGT‑AATAAGCAAA‑AGGCAAT‑AAATGAGGGGAC‑AG‑A‑GAG‑GGATTC‑TAACTGTACCGCCATGATTTCTACCCGAAT‑GCCAGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGAGGTTCGACAACATGCAAAAAGCGATTGACCGGAATCGTCCTGCCTGTCAGGa                                                                <  2:689243/239‑1 (MQ=255)
                                                                                                                                                                                        aaCT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑TAT‑TGTCGA‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                                                        <  2:739830/239‑1 (MQ=255)
                                                                                                                                                                                        aaCT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAATTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                                                        <  1:567100/239‑1 (MQ=255)
                                                                                                                                                                                         aaaggggatcgacagaatgaGGGAAAGT‑AAAAACAAAA‑AGGAAGT‑G‑ATGAATTG‑C‑AGAA‑GATGTGTTGC‑AAACTTTACCGCCATGATTTCTAATCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAAGCGTCCTGCCTGTCAGGACATCgggg                                                        <  2:14695/223‑1 (MQ=255)
                                                                                                                                                                                              gAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACAGCCATGATTTCTACCCGAAT‑GCCCGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATCCAACAAGCGATTGACCTGAATACTCCTGCCTGTCAGGACACCTGGGAGAta                                                   >  2:767572/1‑238 (MQ=255)
                                                                                                                                                                                                   gCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTc                                                                                                                                                                                                              <  1:752411/80‑1 (MQ=255)
                                                                                                                                                                                                   gCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGt                                               >  1:100135/1‑238 (MQ=255)
                                                                                                                                                                                                   gCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGt                                               >  1:1068313/1‑238 (MQ=255)
                                                                                                                                                                                                   gCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGAGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGt                                               >  2:228097/1‑238 (MQ=255)
                                                                                                                                                                                                    ccatgagagacaaaaGT‑AATAAGCAAC‑AGGCATT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGT‑AAACTTAACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGtt                                              <  2:358918/226‑1 (MQ=255)
                                                                                                                                                                                                    ccATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCg                                                           >  1:108414/1‑225 (MQ=255)
                                                                                                                                                                                                              cGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAg                                   >  2:830381/1‑239 (MQ=255)
                                                                                                                                                                                                                   gT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGt                              >  1:522259/1‑239 (MQ=255)
                                                                                                                                                                                                                               c‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTcc                    >  2:5762/1‑238 (MQ=255)
                                                                                                                                                                                                                               c‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGAAGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGAAGGGGAAAATGATCTACCATACTATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCATCCTGCCTGACAGTACACCGCGGAGACTATGTTCTTCGTTAAAGTCGATTCCCACTTccc                   >  1:1386537/1‑239 (MQ=255)
                                                                                                                                                                                                                                            tAAGTTGAA‑AG‑A‑GTT‑TTTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCg        <  1:1358887/239‑1 (MQ=255)
                                                                                                                                                                                                                                            tAAGTGGAC‑AA‑A‑GTT‑TTCCGT‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCg        <  1:1029312/239‑1 (MQ=255)
                                                                                                                                                                                                                                            aaaGTTGAA‑AA‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGAATTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCg        <  1:599508/238‑1 (MQ=255)
                                                                                                                                                                                                                                              atgggAC‑AG‑A‑AGT‑TGTCCA‑TATCTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCGAg      <  2:903456/235‑1 (MQ=255)
                                                                                                                                                                                                                                              aGTTGAA‑AG‑A‑GAT‑TTCCGT‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCGAg      <  1:604227/239‑1 (MQ=255)
                                                                                                                                                                                                                                                  gAC‑AG‑A‑GAT‑TGTCTC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCGAGCTGc  <  1:1019896/239‑1 (MQ=255)
                                                                                                                                                                                                                                                  gAC‑AG‑A‑GAT‑TGTCGT‑TATCTTTACCGGCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCGAGCTGc  <  2:750589/239‑1 (MQ=255)
                                                                                                                                                                                                                                                  gAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGa                                                                                                                                                                                                       >  2:375757/1‑43 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                  
GCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑G‑AATTTTTCCAGACAAATA‑CAAAAACT‑GGAGTTGCCATGATGAGCGAAAGT‑AATAAGCAAC‑AGGCAGT‑GAATAAGTTGAC‑AG‑A‑GAT‑TGTCGC‑TAACTTTACCGCCATGATTTCTACCCGAAT‑GCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCGAGCTGC  >  NC_000913/3206267‑3206740

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑