| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3142449 | 203 (1.450) | 3 (0.020) | 3/416 | NT | 1.5% | coding (539/1704 nt) | hybC | hydrogenase 2, large subunit |
| ? | NC_000913 | = 3142459 | 192 (1.420) | coding (529/1704 nt) | hybC | hydrogenase 2, large subunit | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACATCAGGCGCTCAAGGTTCAGCACGCCCAAACCGTCGAGGTTGATCGGGTTCGCGACACCACCTACCGCCAGGTTCTGAATGTGCGGCGTTTTACCGCCCAGCAGCGCCACGACGCGGTTAGCGTCACGCTGGCACTCCAACGCTTGCAGGTAGTGCGCTACCGCAATCAGGTTCACTTCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3142206‑3142449‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcgATGAAACTGCCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGTTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGCCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAACCTTGAGCGCCTGATGTACATCAAGTCTTTCATCGACAAACTGAGCGACTTTGTTGAGC < NC_000913/3142459‑3142222 TCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACATCAGGCGCTCAAGGTTCAGCACGCCCAAACCGTCGAGGTTGATCGGGTTCGCGACACCACCTACCGCCAGGTTCTGAATGTGCGGCGTTTTACCGCCCAGCAGCGCCACGACGCGGTTAGCGTCACGCTGGCACTCCAACGCTTGCAGGTAGTGCGCTACCGCAATCAGGTTCACTT > 2:1338708/1‑238TCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACATCAGGCGCTCAAGGTTCAGCACGCCCAAACCGTCGAGGTTGATCGGGTTCGCGACACCACCTACCGCCAGGTTCTGAATGTGCGGCGTTTTACCGCCCAGCAGCGCCACGACGCGGTTAGCGTCACGCTGGCACTCCAACGCTTGCAGGTAGTGCGCTACCGCAATCAGGTTCACTT > 1:146197/1‑238 CTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACATCAGGCGCTCAAGGTTCAGCACGCCCAAACCGTCGAGGTTGATCGGGTTCGCGACACCACCTACCGCCAGGTTCTGAATGTGCGGCGTTTTACCGCCCAGCAGCGCCACGACGCGGTTAGCGTCACGCTGGCACTCCAACGCTTGCAGGTAGTGCGCTACCGCAATCAGGTTCACTTCCGGCG > 1:1090341/1‑239 ATCAGGCGCTCAAGGTTCAGCACGCCCAAACCGTCGAGGTTGATCGGGTTCGCGACCCCACCTACCGCCAGGTTCTGAATGTGCGGCGTTTTACCGCCCAGCAGCGCCACGACGCGGTTAGCGTCACGCTGGCACTCCAACGCTTGCAGGTAGTGCGCTACCGCAATCAGGTTCGCTTCCGGCGGCAGTTTCATCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGT < 1:1126845/239‑1 AGCACGCCCAAACCGTCGAGGTTGATCGGGTTCGCGACACCACCTACCGCCAGGTTCTGAATGTGCGGCGTTTTACCGCCCAGCAGCGCCACGACGCGGTTAGCGTCACGCTGGCACTCCAACGCTTGCAGGTAGTGCGCTACCGCAATCAGGTTCACTTCCGGCGGCAGTTTCATCGCCGGAAGTGAACCTGATTGCGGTAGCGCAGTACATGCAAGCGCTGGAGTGCCAGCGTGAC > 2:1136715/1‑238 ACGCCCAAACCGTCGAGGTTGATCGGGTTCGCGACCCCACCTACCGCCAGGTTCTGAATGTGCGGCGTTTTACCGCCCAGCAGCGCCACGACGCGGTTAGCGTCACGCTGGCACTCCAACGCTTGCAGGTAGTGCGCTACCGCAATCAGGTTCACTTCCGGCGGCAGTTTCATCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGTTGGAGTGCCAGCGTGACGC < 1:1136715/237‑1 GCGATGAAACTGCCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGTTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGCCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAACCTTGAG < 1:1281710/189‑1 GCGATGAAACTGCCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGTTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGCCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAACCTTGAG > 2:1281710/1‑189 CGATGAAACTGCCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGTTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGCCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAACCTTGAGCGCCTGATGTACATCAAGTCTTTCATCGACAAACTGAGCGACTTTGTTGA > 1:1457656/1‑238 GATGAAGCTTCCGCCGGAAGTGAACCTGATTGCGGTAGCGCTCTACCTGCAAGCGTTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGCCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAACCTTGAGCGCCTGATGTACATCAAGTCTTTCATCGACAAACTGAGCGACTTTGTTGAGC < 1:918096/239‑1 GATGAAACTGCCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTGCCTGCAAGCGTTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGCCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAGCCTTGAGCGCCTGATGTACATCAAGTCTTTCATCGACAAACTGAGCGACTTTGTTGAGC < 1:1449864/239‑1 GATGAAACTGCCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGTTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGTCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAACCTTGAGCGCCTGATGTACATCAAGTCTTTCATCGACAAACTGAGCGACTTTGTTGAG < 1:757107/238‑1 GATGAAACTGCCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGTTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGCCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAACCTTGAGCGCCTGATGTACATCAAGTCTTTCATCGACAAACTGAGCGACTTTGTTGAG < 2:1397173/238‑1 GATGAAACTGCCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGTTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGCCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAACCTTGAGCGCCTGATGTACATCAAGTCTTTCATCGACAAACTGAGCGACTTTGTTGAG < 2:1530560/238‑1 GATGAAACTGCCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGTTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGCCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAACCTTGAGCGCCTGATGTACATCAAGTCTTTCATCGACAAACTGAGCGACTTTGTTGAG < 2:214380/238‑1 GATGAAACTGCCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGTTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGCCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAACCTTGAGCGCCTGATGTACATCAAGTCTTTCATCGACAAACTGAGCGACTTTGTTGAG < 2:70573/238‑1 GATGAAACTGCCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGTTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGCCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAACCTTGAGCGCCTGATGTACATCAAGTCTTTCATCGACAAACTGAGCGACTTTGTTGAG < 2:829596/238‑1 GATGAAACTGCCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGGTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGCCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAACCTTGAGCGCCTGATGTACATCAAGTCTTTCATCGACAAACTGAGCGACTTTGTTGAGC < 1:1472538/239‑1 GATGAAACCGCCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGTTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGCCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAACCTTGAGCGCCTGATGTACATCAAGTCTTTCATCGACAAACTGAGCGACTTTGTTGAG < 2:9474/238‑1 TCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACATCAGGCGCTCAAGGTTCAGCACGCCCAAACCGTCGAGGTTGATCGGGTTCGCGACACCACCTACCGCCAGGTTCTGAATGTGCGGCGTTTTACCGCCCAGCAGCGCCACGACGCGGTTAGCGTCACGCTGGCACTCCAACGCTTGCAGGTAGTGCGCTACCGCAATCAGGTTCACTTCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3142206‑3142449‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcgATGAAACTGCCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGTTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGCCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAACCTTGAGCGCCTGATGTACATCAAGTCTTTCATCGACAAACTGAGCGACTTTGTTGAGC < NC_000913/3142459‑3142222 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |