| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3230015 = | 148 (1.060) | 3 (0.020) | 3/404 | NT | 1.9% | coding (1130/2352 nt) | ygjK | alpha‑glucosidase |
| ? | NC_000913 | 3230701 = | 163 (1.240) | coding (1816/2352 nt) | ygjK | alpha‑glucosidase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGCCGTTGCCGTTGTGATCGCGGTTACGTAACCACCAGTCGTGATAGGCCACCAGTTTCGGGTACATCTCTGCCACCCAGGTTTTATCTTGGGTGACGTTATACACTTCCATCACCGACCAGGCGGCAAGGCTGGGTTTGGTATTACGTTCGTTCCAGTTGCCGCCATCGCCACCACGCTCGGGGCTAAGGTTCCACGCTATCAGGTCGGGGACAAAGCCCACATCCTGCGGACGCACGCTATCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3230263‑3230015‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgctatcgccagTTGGCACAGCAGCTCGCGGACTACATCAACACCTGTATGTTCGACCCGACTACCCAGTTCTACTATGACGTACGTATTGAAGATAAACCACTGGCGAACGGCTGCGCGGGCAAACCGATTGTTGAGCGCGGTAAAGGGCCGGAAGGCTGGTCGCCGCTGTTTAACGGTGCGGCAACGCAGGCCAATGCCGACGCGGTGGTGAAGGTGATGCTCGATCCTAAAGAGTTCAAC > NC_000913/3230701‑3230931 CGCCGTTGCCGTTGTGATCGCGGTTACGTAACCACCAGTCGTGATAGGCCACCAGTTTCGGGTACATCTCTGCCACCCAGGTTTTATCTTGGGTGACGTTATACACTTCCATCACCGACCAGGCGGCAAGGCTGGGTTTGGTATTACGTTCGTTCCAGTTGCCGCCATCGCCACCACGCTCGGGGCTAAGGTTCCACGCTATCAGGTCGGGGACAAAGCCCACATCCTGCGGACGCAC > 1:1120605/1‑238CGCCGTTGCCGTTGTGATCGCGGTTACGTAACCACCAGTCGTGATAGGCCACCAGTTTCGGGTACATCTCTGCCACCCAGGTTTTATCTTGGGTGACGTTATACACTTCCATCACCGACCAGGCGGCAAGGCTGGGTTTGGTATTACGTTCGTTCCAGTTGCCGCCATCGCCACCACGCTCGGGGCTAAGGTTCCACGCTATCAGGTCGGGGACAAAGCCCACATCCTGCGGACGCAC > 2:1010602/1‑238 GCCGTTGCCGTTGTGATCGCGGTTACGTAACCACCAGTCGTGATAGGCCACCAGTTTCGGGTACATCTCTGCCACCCAGGTTTTATCTTGGGTGACGTTATACACTTCCATCACCGACCAGGCGGCAAGGCTGGGTTTGGTATTACGTTCGTTCCAGTTGCCGCCATCGCCACCACGCTCGGGGCTAAGGTTCCACGCTATCAGGTCGGGGACAAAGCCCACATCCTGCGGACGCACGC < 1:75911/239‑1 CGTTGCCGTTGTGATCGCGGTTACGTAACCACCAGTCGTGATAGGCCACCAGTTTCGGGTACATCTCTGCCACCCAGGTTTTATCTTGGGTGACGTTATACACTTCCATCACCGACCAGGCGGCAAGGCTGGGTTTGGTATTACGTTCGTTCCAGTTGCCGCCATCGCCACCACGCTCGGGGCTAAGGTTCCACGCTATCAGGTCGGGGACAAAGCCCACATCCTGCGGACGCACGCT < 2:1534709/238‑1 TGCCGTTGTGATCGCGGTTACGTAACCACCAGTCGTGATAGGCCACCAGTTTCGGGTACATCTCTGCCACCCAGGTTTTATCTTGGGTGACGTTATACACTTCCATCACCGACCAGGCGGCAAGGCCGGGTTTGGTATTACGTTCGTTCCAGTTGCCGCCATCGCCACCACGCTCGGGGCTAAGGTTCCACGCTATCAGGTCGGGGACAAAGCCCACATCCTGCGGACGCACGCTATCG < 1:1265370/239‑1 GCCGTTGTGATCGCGGTTACGTAACCACCAGTCGTGATAGGCCACCAGTTTCGGGTACATCTCTGCCACCCAGGTTTTATCTTGGGTGACGTTATACACTTCCATCACCGACCAGGCGGCAAGGCTGGGTTTGGTATTACGTTCGTTCCAGTTGCCGCCATCGCCACCACGCTCGGGGCTAAGGTTCCACGCTATCAGGTCGGGGACAAAGCCCACATCCTGCGGACGCACGCTATCGC < 2:648593/239‑1 GCCGTTGTGATCGCGGTTACGTAACCACCAGTCGTGATAGGCCACCAGTTTCGGGTACATCTCTGCCACCCAGGTTTTATCTTGGGTGACGTTATACACTTCCATCACCGACCAGGCGGCAAGGCTGGGTTTGGTATTACGTTCGTTCCAGTTGCCGCCATCGCCACCACGCTCGGGGCTAAGGTTCCACGCTATCAGGTCGGGGACAAAGCCCACATCCTGCGGACGCACGCTATCGC < 1:74142/239‑1 GTTGTGATCGCGGTTACGTAACCACCAGTCGTGATAGGCCACCAGTTTCGGGTACATCTCTGCCACCCAGGTTTTATCTTGGGTGACGTTATACACTTCCATCACCGACCAGGCGGCAAGGCTGGGTTTGGTATTACGTTCGTTCCAGTTGCCGCCATCGCCACCACGCTCGGGGCTAAGGTTCCACGCTATCAGGTCGGGGACAAAGCCCACATCCTGCGGACGCACGCTATCGCCAG < 2:592923/239‑1 TTGTGATCGCGGTTACGTAACCACCAGTCGTGATAGGCCACCAGTTTCGGGTACATCTCTGCCACCCAGGTTTTATCTTGGGTGACGTTATACACTTCCATCACCGACCAGGCGGCAAGGCTGGGTTTGGTATTACGTTCGTTCCAGTTGCCGCCATCGCCACCACGCTCGGGGCTAAGGTTCCACGCTATCAGGTCGGGGACAAAGCCCACATCCTGCGGACGCACGCTATCGCCAG > 1:967312/1‑238 GTGATCGCGGTTACGTAACCACCAGTCGTGATAGGCCACCAGTTTCGGGTACATCTCTGCCACCCAGGTTTTATCTTGGGTGACGTTATACACTTCCATCACCGACCAGGCGGCAAGGCTGGGTTTGGTATTACGTTCGTTCCAGTTGCCGCCATCGCCACCACGCTCGGGGCTAAGGTTCCACGCTATCAGGTCGGGGACAAAGCCCACATCCTGCGGACGCACGCTATCGCCAG > 1:94237/1‑236 GTGATCGCGGTTACGTAACCACCAGTCGTGATAGGCCACCAGTTTCGGGTACATCTCTGCCACCCAGGTTTTATCTTGGGTGACGTTATACACTTCCATCACCGACCAGGCGGCAAGGCTGGGTTTGGTATTACGTTCGTTCCAGTTGCCGCCATCGCCACCACGCTCGGGGCTAAGGTTCCACGCTATCAGGTCGGGGACAAAGCCCACATCCTGCGGACGCACGC > 1:513734/1‑227 GTGATCGCGGTTACGTAACCACCAGTCGTGATAGGCCACCAGTTTCGGGTACATCTCTGCCACCCAGGTTTTATCTTGGGTGACGTTATACACTTCCATCACCGACCAGGCGGCAAGGCTGGGTTTGGTATTACGTTCGTTCCAGTTGCCGCCATCGCCACCACGCTCGGGGCTAAGGTTCCACGCTATCAGGTCGGGGACAAAGCCCACATCCTGCGGACGCACGC < 2:513734/227‑1 GGGTGACGTTATACACTTCCATCACCGACCAGGCGGCAAGGCTGGGTTTGGTATTACGTTCGTTCCAGTTGCCGCCATCGCCACCACGCTCGGGGCTAAGGTTCCACGCTATCAGGTCGGGGACAAAGCCCACATCCTGCGGACGCACGCTATCGCCAGTTGGCACAGCAGCTCGCGGACTACATCAACACCTGTATGTTCGACCCGACTACCCAGTTCTACTATGACGTACGTATTGA > 2:641655/1‑239 CGCCACCACGCTCGGGGCTAAGGTTCCACGCTATCAGGTCGGGGACAAAGCCCACATCCTGCGGACGCACGCTATCGCCAGTTGGCACAGCAGCTCGCGGACTACATCAACACCTGTATGTTCGACCCGACTACCCAGTTCTACTATGACGTACGTATTGAAGATAAACCACTGGCGAACGGCTGCGCGGGCAAACCGATTGTTGAGCGCGGTAAAGGGCCGGAAGGCTGGTCGCCGCT < 1:641655/239‑1 TCGGGGACAAAGCCCACATCCTGCGGACGCACGCTATCGCCAGTTGGCACAGCAGCTCGCGGACTACATCAACACCGGTATGTTCGACCCGACTACCCAGTTCTACTATGACGTACGTATTGAAGATAAACCACTGGCGAACGGCTGCGCGGGCAAACCGATTGTTGAGCGCGGTAAAGGGCCGGAAGGCTGGTCGCCGCTGTTTAACGGTGCGGCAACGCAGGCCAATGCCGACGC < 1:888388/237‑1 ACGCTATCGCCAGTTGGCACAGCAGCTCGCGGACTACATCAACACCTGTATGTTCGACCCGACTACCCAGTTCTACTATGACGTACGTATTGAAGATAAACCACTGGCGAACGGCTGCGCGGGCAAACCGATTGTTGAGCGCGGTAAAGGGCCGGAAGGCTGGTCGCCGCTGTTTAACGGTGCGGCAACGCAGGCCAATGCCGACGCGGTGGTGAAGGTGATGCTCGATCCTAAAGAGT > 2:1305266/1‑239 TATCGCCAGTTGGCACAGCAGCTCGCGGACTACATCAACACCTGTATGTTCGACCCGACTACCCAGTTCTACTATGACGTACGTATTGAAGATAAACCACTGGCGAACGGCTGCGCGGGCAAACCGATTGTTGAGCGCGGTAAAGGGCCGGAAGGCTGGTCGCCGCTGTTTAACGGTGCGGCAACGCAGGCCAATGCCGACGCGGTGGTGAAGGTGATGCTCGATCCTAAAGAGTTCAA < 1:883253/239‑1 TATCGCCAGTTGGCACAGCAGCTCGCGGACTACATCAACACCTGTATGTTCGACCCGACTACCCAGTTCTACTATGACGTACGTATTGAAGATAAACCACTGGCGAACGGCTGCGCGGGCAAACCGATTGTTGAGCGCGGTAAAGGGCCGGAAGGCTGGTCGCCGCTGTTTAACGGTGCGGCAACGCAGGCCAATGCCGACGCGGTGGTGAAGGTGATGCTCGATCCTAAAGAGTTCAA < 1:1467594/239‑1 ATCGCCAGTTGGCACAGCAGCTCGCGGACTACATCAACACCTGTATGTTCGACCCGACTACCCAGTTCTACTATGACGTACGTATTGAAGATAAACCACTGGCGAACGGCTGCGCGGGCAAACCGATTGTTGAGCGCGGTAAAGGGCCGGAAGGCTGGTCGCCGCTGTTTAACGGTGCGGCAACGCAGGCCAATGCCGACG < 2:1204259/201‑1 ATCGCCAGTTGGCACAGCAGCTCGCGGACTACATCAACACCTGTATGTTCGACCCGACTACCCAGTTCTACTATGACGTACGTATTGAAGATAAACCACTGGCGAACGGCTGCGCGGGCAAACCGATTGTTGAGCGCGGTAAAGGGCCGGAAGGCTGGTCGCCGCTGTTTAACGGTGCGGCAACGCAGGCCAATGCCGACG > 1:1204259/1‑201 TCGCCAGTTGGCACAGCAGCTCGCGGACTACATCAACACCTGTATGTTCGACCCGACTACCCAGTTCTACTATGACGTACGTATTGAAGATAAACCACTGGCGAACGGCTGCGCGGGCAAACCGATTGTTGAGCGCGGTAAAGGGCCGGAAGGCTGGTCGCCGCTGTTTAACGGTGCGGCAACGCAGGCCAATGCCGACGCGGTGGTGAAGGTGATGCTCGATCCTAAAGAGTTCAAC > 1:778427/1‑238 CGCCGTTGCCGTTGTGATCGCGGTTACGTAACCACCAGTCGTGATAGGCCACCAGTTTCGGGTACATCTCTGCCACCCAGGTTTTATCTTGGGTGACGTTATACACTTCCATCACCGACCAGGCGGCAAGGCTGGGTTTGGTATTACGTTCGTTCCAGTTGCCGCCATCGCCACCACGCTCGGGGCTAAGGTTCCACGCTATCAGGTCGGGGACAAAGCCCACATCCTGCGGACGCACGCTATCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3230263‑3230015‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgctatcgccagTTGGCACAGCAGCTCGCGGACTACATCAACACCTGTATGTTCGACCCGACTACCCAGTTCTACTATGACGTACGTATTGAAGATAAACCACTGGCGAACGGCTGCGCGGGCAAACCGATTGTTGAGCGCGGTAAAGGGCCGGAAGGCTGGTCGCCGCTGTTTAACGGTGCGGCAACGCAGGCCAATGCCGACGCGGTGGTGAAGGTGATGCTCGATCCTAAAGAGTTCAAC > NC_000913/3230701‑3230931 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |