Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,151,691 C→T 18.1% intergenic (+45/+20) yegJ → / ← yegK uncharacterized protein/ser/thr phosphatase‑related protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,151,6910CT18.1% 93.5 / 5.6 58intergenic (+45/+20)yegJ/yegKuncharacterized protein/ser/thr phosphatase‑related protein
Reads supporting (aligned to +/- strand):  ref base C (25/22);  new base T (6/5);  total (31/27)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01

TATTGTTACAAACGTAGAATATGGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGATGTATACGCGCGGGGATAAAATTTA‑CGGCGG‑TTATACCATTGATCCTTTATTGGT‑CACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTGTTGTCTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGCCAGTCGCTGGATACCATCCGTA  >  NC_000913/2151475‑2151921
                                                                                                                                                                                                                              |                                                                                                                                                                                                                                         
tATTGTTAAAAACGGAGAATAGGGCAGGGAGTGAAAAAAAAAGAAAAAAGATATTTCAGTCTGGATTTATACGGGGGGGAAAAAAATTTG‑CGGTGT‑TTATACCATTGATCTTTTATTGGT‑CACTTATCAAAAAAAAGAAGCCGACGAGAAAAGAGAAAAATTGGTTCGCTAACCCGCCTTTATATTTATTGTTAAAACGGGC‑GGTT‑G‑AATTGTTGTCTTCAA‑CCGCCATG‑AGAAactc                                                                                                                                                                                                                    <  2:939130/238‑1 (MQ=255)
 aTTGTTACAAACGTAGAATATGGCGAGGAGGGAAAAAAAAAAAAAGAAGATATTTCAGACTGGATGTATACGCGCGGGAATAAAATTTA‑CGGCGG‑TTATCCCTTTGATCTTTTATTGGT‑CACCTATCAAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGTTAACCAGCCGTTATATTTATTGTTTAAACGGGC‑GGTT‑G‑AATTGTTTTTTTCAA‑CCGCCATG‑AGAAactcac                                                                                                                                                                                                                  <  1:842872/239‑1 (MQ=255)
                  atatGGCCGGGGGTGAAAAAAAAAAAAAGAAGATATTCCAGACTGGATTTATACGCGCGGGGATAAAATTTA‑CGGGGG‑TTATACAATTAATCTTTTATTGGT‑CACCTACCAAAAAGAAGAAGCCGACGAGCTAAGAGAAAAATTAGTTCCTTAATCAGCCTTTATATTTATTGTTAAACCGGGC‑GGTT‑A‑AATTTTTGTCTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGcc                                                                                                                                                                                                   <  1:1370609/237‑1 (MQ=255)
                     tGGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGATGTATACGCGCGGGGATAAAATTTA‑CGGCGG‑TTATACCATTTATCCTTTTTTTGT‑CACCTATTCAAAAAAAGAAGACGACGAGCTAAGAGCAAAAATAGTTTGCTTATTAGACGTTATATTTATTTTTTAAAATAGC‑GGGT‑GTATTTTTTTTTTTTAA‑CACCCTTGAAAAAACACACTTTCCCCACAGCCCCAg                                                                                                                                                                                                 >  1:404175/1‑238 (MQ=255)
                       gcagggaggaaaaaaaaaaaaaaaaaGATTTTACAATCGGGATGTAACCGGGCGGGGA‑AAAATTTT‑CGGGGGTTTATCCCATTGATCTTTTATTGGT‑CCCCTAACAAAAAAAAGAAGCCGACGAGAAAAGAGAAAAATTAGTTCGCAAACCAGCCGTTATATTTATTTTTAAAACGGGG‑GGTT‑G‑ATTTTTTTTCTACAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGcc                                                                                                                                                                                             <  2:1272789/218‑1 (MQ=255)
                         cAGGAGTGGAAAAAAAAAAAGAAAGTTTTTTCAGCCGGGATGTATCCGCG‑GGGGAAAAAATTTACCGGGTG‑TTATCCCATTGTTCCTTTATGGGT‑CCCCTACCAAAAAGAAGAACCCAACGAGTTAAGAGAAAAATTGTTCCGCTAATAAGCGTTTATTTTTATTGTTTAAACGGGG‑GGTT‑A‑AATTGTTGTCTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCaa                                                                                                                                                                                           <  1:501181/238‑1 (MQ=255)
                             aGTGGAAAAAAAAGAAAAAAGATTTTACACTCTGTATGTATACGCGGTGGAAAAAATTTTA‑CGGGGT‑TTATCCCATTGAT‑CTTTTTTGGTCCCCCTATCAAAAAAAAGAGGCCCGGGAGCAAAGAAAAAAATTTTTTCGTAAACCACCCTTTATATTTTTTTTTTAAACGGGG‑GGTG‑A‑AATTGTTTTCTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGtt                                                                                                                                                                                       <  2:1073912/238‑1 (MQ=255)
                                                      ttCAGACTGGATGTATACGCGCGGGGATAAAATTTA‑CGGCGG‑TTATACCATTGATCCTTTATTGGT‑CACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTGTTGTCtt                                                                                                                                                                                                                                         <  1:797680/165‑1 (MQ=255)
                                                               gttGTATACGCGGGGGGAAAAAATTTC‑CGGGGT‑TTACACTGTTGATCTTTTTTGGGT‑AACATATCAAAAAGAAGAAGCCGACGAGTAAAAATAAAAATTATTTCCATAAACATCTTTTATATTTATTTTTAAAACTGGG‑GGTT‑T‑AATTCTTTCCCTAAT‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGc                                                                                                                                                     <  1:1296637/236‑1 (MQ=255)
                                                                       cgcgggGGGATAAAATTTA‑CGGGGT‑TTATCCCATTGATCTTTTATTGGT‑CACTTATCAAAAAGAAGAAGCCGACGATCTAAGAGAAAAATTATTTCGCAAATCAGCCGTTATATTTTTTGTTAAACCGGGG‑GGTT‑A‑ATTTGTTTTCTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACaaaa                                                                                                                                            <  1:507052/239‑1 (MQ=255)
                                                                       cgcgggGGAAAAAAATTTA‑CGGCGG‑TTATACCTTTTATCCTTTTTGGCT‑CCCCTCCCAAAAAAAAAAAGCCGCCGATCAAAGAGAAAAATTGGTTCGCTAATCAGCCTTTATATTTTTTTTTTAACCGGGG‑GGTT‑G‑ATTTTTTGTCTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACaaaa                                                                                                                                            <  1:1475065/239‑1 (MQ=255)
                                                                                       ttA‑CGGGGT‑TTATACATTTGATCTTTTATTGGT‑CCCCTATCAAAAAGAAAAAGCCGAAGAGCTAAGAGAAAAATTATTCCGCTAATCAGCGTTTATTTTTTTTTTTTAAACGGGC‑GTTT‑G‑AATTGTTGTCTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTc                                                                                                                           <  1:1417096/239‑1 (MQ=255)
                                                                                       ttA‑CGGGGG‑TTAAACAATTGATCTTTTTTTGGT‑CCCCTACCAAAAAAAAGAAGCCGACGAGAAAAGAAAAAAATTATTCCGTTAACCAGCTGTTATTTTTATTTTTAAAACGGGG‑GTTT‑G‑ATTTTTTGTTTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTc                                                                                                                           <  1:762124/239‑1 (MQ=255)
                                                                                        tacgggagg‑TTATAACTTTGATCTTTTATTGGT‑CCCCTAACAAAAAAAAAAACCCGACGAGTAAAGAAAAAAATTAGTTCGCTAACCAGCCTTTATTTTTTTTGTTAAACCGGGC‑GGTT‑G‑AATTGTTGTCTCCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTc                                                                                                                           <  1:30365/232‑1 (MQ=255)
                                                                                                 tttATACCTTTTATCCTTTTTTGGT‑CCCCTATCAAAAAAAAAAACCGAACGAGCTAAGAAAAAAATTTGTTCGTTAATCACCCTTTTTTTTTTTTTTTAAAACGGGG‑GTTT‑G‑AATTTTTGTTTCCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGtaat                                                                                                                    <  1:1409538/237‑1 (MQ=255)
                                                                                                         aTTTATCCTTTATTGGT‑CACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGGTT‑T‑AATTTTGTTTTTCAA‑CCCCCTTA‑GGAAAACAACCTTCCCCCCACGCCCCGGGCCACCGTTTTTTCATATACCTTACCCCCGTTTCCCCCGCGGCTGGGCAAAAACTCT‑TTTAAAAATTCCgggataaaaat                                                                                                               >  2:254185/1‑227 (MQ=255)
                                                                                                           tGATCCTTTATTGGT‑CACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑GATTTTTTTTTTCCA‑CCCGCATT‑AAAAAATCACTCTTCCCACAACGCCAGTGCCAACGGTTTATCATCATCCCAACCCCCGCTTACCGCCGGGCTGGGCAAAAACTTCTTTTACCATTTCAGGAATTAAATAGAgtt                                                                                                          >  2:1125891/1‑239 (MQ=255)
                                                                                                           tGATCCTTTATTGGT‑CACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTGTTGTCTTTAA‑CCGCCATG‑AGAAAATAACTCTGCCCACAGCGCCAGTGCCAACGTTTTTTCATCATCCGTACGCCCCTTTACCCCCGGGCTGGGCAAAAACTGC‑TTTAACAATTCAGGGAATAAATCGAgtta                                                                                                         >  2:87208/1‑238 (MQ=255)
                                                                                                           tGATCCTTTATTGGT‑CACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTGTTGTCTTCTA‑CCGCCAAG‑AGAAACTCACTCTCCCCACCGCGCCACTGCCCACGTTTTATCATCATCCCTACGCTCGTTTAACCCCGCGCTGGGCCACAACCTC‑TTTTACAATTAAGGTAATAAAACCAgttt                                                                                                         >  2:1402626/1‑238 (MQ=255)
                                                                                                            gATCCTTTATTGGT‑CACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑T‑AATTGTTTTCTTCAA‑CCGCCATG‑AGAAAATCACTCTGCCCACAGCGCCAGTGCCAACCTTTTTTCATCATCCGTATGCCCCCTTACCGCCCGGCTGGACCAAAACTGC‑TTTTACAATTTAGGTCATAAATCGtgttgt                                                                                                        >  1:842855/1‑239 (MQ=255)
                                                                                                            gATCCTTTATTGGT‑CACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTGTTGTCTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAACGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAgttgt                                                                                                        >  1:1218018/1‑239 (MQ=255)
                                                                                                            gATCCTTTATTGGT‑CACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTGTTGTCTTCAA‑CCGCCATG‑AGAAAATCACTCTGCCCACAGCGCCACGGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGGCAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAgttgt                                                                                                        >  1:620733/1‑239 (MQ=255)
                                                                                                             aTCCTTTATTGGT‑CACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTGTTGTCTTCCA‑CCCCCCTG‑AGAAAATCACTCTGCCCCCAGCGCCAGTGCCAACGTTTTATCATCATCCCTACGCTCGTTTACCGCCGGGCTGGACAAAAAATGC‑TTTAACAATTCCGGTAATAAATCGAgttggt                                                                                                       >  2:993269/1‑237 (MQ=255)
                                                                                                               ccTTTATTGGT‑CACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTTGTGTTTTCAA‑CCGCCATG‑AGAAAACCCCTCTGCCCACAGCGCCCGTGCCAACGGTTTATCATCATCCGGACGCTCGTTTACCCCCGGGCTGGGCCAAAACTGC‑TTTAACAAATCAAGGAATAAATCGAggtttt                                                                                                       >  2:586337/1‑232 (MQ=255)
                                                                                                                  ttATTGGT‑CACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑GATTGTTGTCTTCAA‑CCCCCCTG‑AGAAACTCACTCTGCCCCCAGCGCCCGGGCCAACGTTTTATCATCATCCCTACCCCCGTTTTCCGCCGGGGCGGGCAAAAACCGC‑TTTTACAATTTAGGTAATaaaaccggcttttcctt                                                                                                   >  2:1103948/1‑224 (MQ=255)
                                                                                                                   tATTGGT‑CACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑T‑GATTGTTTTCTTCCA‑CCGCCATG‑AGAAACTCCCTCTGCCCCCAGCGCCCGTGCCCACGCTTTTTCATCATCCGTCCCCTCGTTTTCCCCCCGGCTGGCCAAAAACTGC‑TTTTACAATTTCGGTAATaaaaccggttttttcttc                                                                                                  >  2:490281/1‑223 (MQ=255)
                                                                                                                    aTTGGT‑CACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑CATTTTTTTCTTCAA‑CCGCCCTG‑AGAAACTCACTCTGCCCCCAGCGCCAGCGCCCACGCTTTATCATCCTCCGCACCCCCGTTTACCGCCCGGCTGGCCAAAAACTGC‑TCTAACAATTCACGCAATAAATCGCGTTCTTCCTGCgg                                                                                                >  2:710382/1‑238 (MQ=255)
                                                                                                                        gT‑CACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑GATTGTTGTCTTCAA‑CCGCCCTT‑AGAAACTCACTCTGCCCAACGCGCCAGTGCCAACGTTTTATCACCCTCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTTACAATTCTGGGAATAAATCGAGTTGTTCCTGCGtt                                                                                               >  2:360203/1‑236 (MQ=255)
                                                                                                                        gT‑CACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTGTTTTTTTTCA‑CCGCCGTA‑AGGAACTCACTCTTCCCACAGCGCCAGTGCCAACGTTTTTTCAACCACCGTACCCTCGTTTTCCGCCGGGCCGGGCAAAAACCGC‑TTTATCAATTTAGGTCATAAAACGAGCTGTTCCTGCgattca                                                                                            >  2:64607/1‑234 (MQ=255)
                                                                                                                          caataaataaaaaaaaaaaaGCCGAGAAGAAAAGAAAAAAATTTGTTCGATAAGCATCTGTTATATTTATTGTATAAACGGGG‑GGTT‑A‑GATTTTTGTCAAAAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTtgct                                                                                            <  2:620733/228‑1 (MQ=255)
                                                                                                                            aCCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTGTTGTCTTCTA‑CCGCCATT‑AGAAACTCACTCTGCCCACAACGCCCATGCCAACGCTTTTTCATCATCCGTAAGCCCGTTTTCCGCCCGGCTGGGCCAAAACTTC‑TTTAACCATTTAGGTAATAAATCGAGTTGTTTCCTCGTtgctgc                                                                                          >  2:488447/1‑238 (MQ=255)
                                                                                                                            aCCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTGTTGTCTTCAA‑CCGCCCTG‑AGAAACTCACTCTGCCCCCCGCGCCAGTGCCCACGTTTTATCATCATCCGTACGCTCGTTTTCCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTtgctgc                                                                                          >  1:1334267/1‑238 (MQ=255)
                                                                                                                            aCCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTGTTGTCTTCAA‑CCGCCATG‑AGAAAATCACTCTGCCCCCAGCGCCAGTGCCAACGGTTTTTCATTATCCGTAAGCCCGTTTACCCCCGGGCCGGACAAAAACTGC‑TTTTACAATTCAGGGAATAAATCCAGTTTTTCCTGCGtttgtgc                                                                                          >  1:274662/1‑233 (MQ=255)
                                                                                                                              cTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTGTTTTCTTCAA‑CCCCCCTT‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTTTCATCATCCGTACGCTCGTTTATCGCCCGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGGTGTTCCTGCGTTGCTgccg                                                                                        >  1:1198077/1‑238 (MQ=255)
                                                                                                                              cTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AAATGTTGTCTTCAA‑ACCCCATG‑AGAAAATCAATCTTCCCACAGCGCCAGTGGCAACGTTTTTTTATCATCAGTAACCCCCGTTAACGCCAGGGGGGGCAAAAACTGC‑TTTAACAATTTAGGAACTAAATCAGGTTGTTCCTGCGTTGCTgccg                                                                                        >  2:617755/1‑238 (MQ=255)
                                                                                                                                aTCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑T‑AAATGGTGTCTTCAA‑CCGCCCTG‑AGAAACTCACTCTTCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCCCGTTTACCGCCGGGCTGGGGAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCa                                                                                     >  1:1260394/1‑239 (MQ=255)
                                                                                                                                             agCCGACGAGCAAGGGTAAAAATTAGTTCGAAAATCAGCCTTTATTTTTTTTGTTAAACCGGGC‑GTTT‑A‑AATTGTTGTCTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGaaaaa                                                                        <  1:1021560/239‑1 (MQ=255)
                                                                                                                                                   cgaGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTGTTGTCTTCAA‑CCGCCATG‑AGAAACTCACTCTTCCCACAGCGCCAGTGCCAACGTTTTTTCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTTACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCCTTGAAAAACGGGGt                                                                  >  1:494350/1‑239 (MQ=255)
                                                                                                                                                   agattaaaaaaaaaatTTAGTTCTATAATCAGCGTTTATTTTTTTTTTAAAAACGGGG‑GGTT‑A‑ATTTTTTGTCTTAAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACgggg                                                                   <  1:993269/226‑1 (MQ=255)
                                                                                                                                                        aaagaaaaaaaTTATTTCGCTAATCAGCCTTTTTATTTATTTTTAAAACTGGG‑GGTT‑A‑AATTTTTTTCTTAAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTaaaga                                                             <  1:1101029/232‑1 (MQ=255)
                                                                                                                                                            agCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTGTTGTCTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGCGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAgg                                                         >  1:568244/1‑239 (MQ=255)
                                                                                                                                                                    tattgcttaattgatccGTTAT‑TTTTTTTTTTAAACTGGG‑AGTTGG‑ATTTTTTGTCTCAAC‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATgag                                                 <  1:1402626/224‑1 (MQ=255)
                                                                                                                                                                    aggTTCGTTACACACCCGTTAT‑TTTATTTGTTAAAACGGG‑GGGT‑G‑AATTGTTGGCTTCAATCCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTGATCATCATCCGTACGCGCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTGGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATgag                                                 <  1:1101241/237‑1 (MQ=255)
                                                                                                                                                                      gTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTGTTGTCTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCCGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCCGGCTGGACAAAAACTGC‑TTTAACAATTCCGGTAATAAATCGGGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTTAAAAACGGGGTAAAGAAAAGCACATgaggg                                               >  1:723251/1‑238 (MQ=255)
                                                                                                                                                                         cgaaaacgggcgtatataTTT‑TTGTTAAAAAGGGG‑GGGT‑GAAATTGTTGTCTACAC‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAAGCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGaa                                            <  1:490281/225‑1 (MQ=255)
                                                                                                                                                                         aaaagaaggccctttttattttttTTTAAACCGGGC‑GGTT‑A‑ATTTTTTTTCTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGaa                                            <  1:93361/223‑1 (MQ=255)
                                                                                                                                                                            tAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTTTTTTTTTCAA‑CCGCCATG‑AGAAAACCACTCTTCCCACAGCGCCCGTGCCAACGTTTTATCTTTATTCCGACGCCCGGTTATCACCGGGGTGGACAAAAAATGC‑CTTTACAATTCAGGTAATAAATCGGATTGTTTCCTCATCGCTGCCGCCCGTCCATTGAAAAAAGGGGTAAAGCAAGGCACATAAGGGGAATTa                                         >  2:409412/1‑239 (MQ=255)
                                                                                                                                                                                  gCCTTTATATTTTTTTTATACACGGGG‑GGTT‑G‑ATTGTTTTTCCTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGc                                   <  1:488447/239‑1 (MQ=255)
                                                                                                                                                                                             tattGTTTAAACTGGC‑GGTT‑T‑AATTGTTGTCTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCCCAGCGCCCGTGCCAACGTTTTATCATCATCCCTACGCTCGTTTACCCCCCGGCTGGGCAAAAAATTC‑TTTTACAATTCAGGGAATAAATCGAGTTGTTTCTGCGTTGCCGCCCCCAGGCCATTTAAAAAAGGGGGAAAAAAAAGCACCAGAAGGGGAATATTCAGCATATTTaaag                         >  2:1265149/1‑236 (MQ=255)
                                                                                                                                                                                             tattGTTTAAACTGGC‑GGTT‑G‑AATTGTTGTCTTTAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCCGGGCCAACGTTTTTTCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTTACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCCGTCCATTGAAAAACGGGGGAAAGAAAGGCACATGAGGAGGATTATCCAGCATATTTAACg                         >  1:1478506/1‑238 (MQ=255)
                                                                                                                                                                                                tGTTTAAACTGGC‑GGTT‑G‑AATTTTTTTCTTCAA‑ACGCCATG‑AGAAACCCACTCTGCCCACAGCGCCAGTGCCAAAGTTTTTTCCTCATTCCTACGCTCGTTTACCCCCCGGCTGGACAAAAAATGC‑TTTAATAATTCCGGTAATAAAATGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCAATGAAAAAAAGGGTAAAGAAAAGCACATTAGGAGAATTATCCAGGATATTTTACGACaa                     >  2:1177603/1‑238 (MQ=255)
                                                                                                                                                                                                tGTTTAAACTGGC‑GGTT‑G‑AATTGTTGTCTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGGTTTATCATCATCCGGACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTTACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCCTTGAAAAACCGGGGAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTactttc                       >  1:1369070/1‑232 (MQ=255)
                                                                                                                                                                                                 tttttttaacttggggttatatttgtttTTTTCAT‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGcc                       <  1:1125891/217‑1 (MQ=255)
                                                                                                                                                                                                    tAAACTGGC‑GGTT‑G‑AATTGTTGTCTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTTACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGCCAGTCg                  >  1:1260263/1‑238 (MQ=255)
                                                                                                                                                                                                         gggC‑GGTT‑A‑AATTGTTTTCTACAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGCCAGTCGCTGGAt            <  1:87208/238‑1 (MQ=255)
                                                                                                                                                                                                           gC‑GGTT‑G‑AATTGTTGTCTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCCGTGCCAACGTTTTTTCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGGACATtagga                                               >  1:1372737/1‑202 (MQ=255)
                                                                                                                                                                                                                      ttttttgtTTCCAC‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGCCAGTCGCTGGATACCATCCGTa  <  1:818027/235‑1 (MQ=255)
                                                                                                                                                                                                                      aTTGTTGTCTCCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGCCAGTCGCTGGATACCATCCGTa  <  1:321336/239‑1 (MQ=255)
                                                                                                                                                                                                                              |                                                                                                                                                                                                                                         
TATTGTTACAAACGTAGAATATGGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGATGTATACGCGCGGGGATAAAATTTA‑CGGCGG‑TTATACCATTGATCCTTTATTGGT‑CACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC‑GGTT‑G‑AATTGTTGTCTTCAA‑CCGCCATG‑AGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGC‑TTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGCCAGTCGCTGGATACCATCCGTA  >  NC_000913/2151475‑2151921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑