Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,731,688 C→A 12.8% Q187K (CAA→AAA)  xylF → D‑xylose transporter subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,731,6880CA12.8% 489.0 / 8.7 173Q187K (CAA→AAA) xylFD‑xylose transporter subunit
Reads supporting (aligned to +/- strand):  ref base C (80/66);  new base A (2/23);  total (82/91)
Fisher's exact test for biased strand distribution p-value = 6.93e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-01

Only 100 of 178 total aligned reads displayed.

TAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATA  >  NC_000913/3731450‑3731922
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                               
tAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGAcc                                                                                                                                                                                                                                                 >  2:63893/1‑239 (MQ=255)
tAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGAcc                                                                                                                                                                                                                                                 >  2:1448062/1‑239 (MQ=255)
 aaaGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCa                                                                                                                                                                                                                                                <  2:834270/239‑1 (MQ=255)
  aaGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCaa                                                                                                                                                                                                                                               <  2:936119/239‑1 (MQ=255)
       ttAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGCAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAACATTAAA‑GTCGTTGGTGAccctgta                                                                                                                                                                                                                                            >  1:303230/1‑232 (MQ=255)
       ttAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGACAGTGTTAAAACCTT‑ACGTTCATT‑CCG‑GAACATTTAAA‑GTCGCTGGTGACCAATG‑G‑Gt                                                                                                                                                                                                                                        >  1:484762/1‑239 (MQ=255)
            ttACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGa                                                                                                                                                                                                                                     <  2:1614804/237‑1 (MQ=255)
               cGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATg                                                                                                                                                                                                                                   >  1:1633001/1‑236 (MQ=255)
               cGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATg                                                                                                                                                                                                                                   >  2:964491/1‑236 (MQ=255)
               cGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATg                                                                                                                                                                                                                                   >  1:1371905/1‑236 (MQ=255)
               cGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATg                                                                                                                                                                                                                                   >  2:1505364/1‑236 (MQ=255)
                gACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCCAAAGCATTGGTCGATATTGTTCAGCAAGGTAATTCCTTCCTGATGGGCGGCTCGCCGGTAGATACCAAAGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAACACTT‑ACGTTGATT‑CCG‑GAAAAATTAAT‑GTCGTTGGTCACCACTG‑T‑GTTGATGGCTg                                                                                                                                                                                                                               >  1:923546/1‑239 (MQ=255)
                  ccGTATGATTAACGATGCGGATATCGATTGTTATATTTCTTTCGATAACGAAAAAGACGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCAGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGt                                                                                                                                                                                                                             <  2:398398/239‑1 (MQ=255)
                  ccGTATGAATAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTgg                                                                                                                                                                                                                              <  1:512834/238‑1 (MQ=255)
                     tATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGTAATAGTCGGAGAACTGCAGGCAAAAGCCCTGGTCGATATTGATCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCT‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTa                                                                                                                                                                                                                           >  1:263616/1‑238 (MQ=255)
                     tATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTa                                                                                                                                                                                                                           >  1:1619096/1‑238 (MQ=255)
                     tATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTa                                                                                                                                                                                                                           >  2:790642/1‑238 (MQ=255)
                     tATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTa                                                                                                                                                                                                                           >  1:685761/1‑238 (MQ=255)
                     tATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGACT‑CCG‑GCAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTa                                                                                                                                                                                                                           >  2:1399535/1‑238 (MQ=255)
                            aaCGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGaaaa                                                                                                                                                                                                                   <  2:997881/239‑1 (MQ=255)
                            aaCGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGaaa                                                                                                                                                                                                                    >  1:811658/1‑238 (MQ=255)
                              cGATGCGGATATCGTTTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTGGGTGACCTATG‑G‑GTTGATAGCTGGTTACCGGAATA‑c                                                                                                                                                                                                                 >  1:256477/1‑238 (MQ=255)
                              cGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑c                                                                                                                                                                                                                 >  2:211241/1‑238 (MQ=255)
                                aTGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTAGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTCAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCa                                                                                                                                                                                                              >  1:1245112/1‑239 (MQ=255)
                                 tGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑t                                                                                                                                                                                                            >  2:1262142/1‑239 (MQ=255)
                                   cGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTg                                                                                                                                                                                                          >  2:1551190/1‑239 (MQ=255)
                                   cGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTg                                                                                                                                                                                                          >  2:1224766/1‑239 (MQ=255)
                                   cGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCCGGTTACCGGAAAA‑CGCA‑TTg                                                                                                                                                                                                          >  1:143806/1‑239 (MQ=255)
                                    ggATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGa                                                                                                                                                                                                         <  2:1617940/239‑1 (MQ=255)
                                    ggATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGa                                                                                                                                                                                                         <  2:693983/239‑1 (MQ=255)
                                               tttATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGaa                                                                                                                                                                                              <  1:964491/239‑1 (MQ=255)
                                                ttATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGCCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAACGTGTTAAAACCTT‑ACGTTGCTT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAACATTATGGaca                                                                                                                                                                                             >  1:463652/1‑237 (MQ=255)
                                                   tatTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTACCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAc                                                                                                                                                                                           >  2:601544/1‑238 (MQ=255)
                                                        ctttcGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTa                                                                                                                                                                                    >  2:1575985/1‑239 (MQ=255)
                                                                  cGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAA‑GAGCTAACCGACaata                                                                                                                                                                          >  1:39299/1‑239 (MQ=255)
                                                                      aaaGTCGGTGAACTGCAGGAAAAAGCCCGGGTCGATATTGTTCCGCAAGGAAATTACTTCCTGATGGGCGGCTCGCCGGTAGAAAACAACGCCAAGCTGTCCCG‑CGCCGGAAAAATGAAAGTGTAAAAACCTT‑ACGTTGATC‑CCG‑AAAAAATTAAA‑GTCGTTGGGGACCAATG‑G‑GTTGAGGGCTGGTTCCCGAAAAA‑CGCA‑TTAAAAATTATGAAAAAC‑GCGCTAACCGCCAAtaataa                                                                                                                                                                      <  2:630991/239‑1 (MQ=255)
                                                                                         cAAAGGCCCGGGTCGATATTGTCCCGCAAGTTAATTACTTCTGGAGGGGCGGCCCGCCGTAAAAAAACACCGCCAAGCTGTCCCG‑CGCCGGAAAAATGAAAGTGTAAAAACCTT‑AGGTTGATT‑CCG‑AAAAAATAAAA‑GTCGTTGGTGACCAAGG‑G‑GTTGATGGCTGGTTACCGAAAAA‑CGCA‑TTGAAAATTATGGAAACC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGt                                                                                                                                                    <  1:86523/238‑1 (MQ=255)
                                                                                                  tGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAAc                                                                                                                                          >  1:1229211/1‑239 (MQ=255)
                                                                                                      cGATATTGTTCCGCAAGGTAATTACTTCCTGAGGGGCGGCTCGCCGGTAGATAACAACGCAAAGCTGTTCCG‑CGCCGGAAAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑AAAAAATTAAA‑GTCGTTGGTGACCAAGG‑G‑GTTGATGGCTGGTTACCGAAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATg                                                                                                                                      <  2:1117709/239‑1 (MQ=255)
                                                                                                                ccGCAAGGTAATTACTTCCGGATGGGCGGCTCGCCGGTAGATAACACCGCAAAGCTGTCCCG‑CGCCGGAAAAATGAAAGTTTTAAACCCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTGGGTGACCAATG‑G‑GTTGAGGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAgg                                                                                                                            <  2:1335826/239‑1 (MQ=255)
                                                                                                                ccGAAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTTTTCCG‑CGCCGGACAAAAGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑AAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGAAAAA‑CGCA‑TTGAAAATTATGGAAACC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAgg                                                                                                                            <  2:22459/239‑1 (MQ=255)
                                                                                                                   cAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTgg                                                                                                                         >  1:783093/1‑239 (MQ=255)
                                                                                                                   cAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTgg                                                                                                                         >  1:1355514/1‑239 (MQ=255)
                                                                                                                   cAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTgg                                                                                                                         >  2:343727/1‑239 (MQ=255)
                                                                                                                   cAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTgg                                                                                                                         >  2:23966/1‑239 (MQ=255)
                                                                                                                   cAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTgg                                                                                                                         >  2:892067/1‑239 (MQ=255)
                                                                                                                   cAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTgg                                                                                                                         >  2:1313662/1‑239 (MQ=255)
                                                                                                                   cAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGCgg                                                                                                                         >  2:460013/1‑239 (MQ=255)
                                                                                                                   cAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGACTCAAACGATGCCACCGCAGGTgg                                                                                                                         >  2:1001271/1‑239 (MQ=255)
                                                                                                                    aaGGTAATTACTCCCGGATGGGGGGCCCGCCGGTAAATAAAAAC‑CCAATGCGTTCCGCCGCCGAAAAAATAAAAGTTTAAAACCCTT‑CCGTTGATT‑CCG‑GAAAAATAAAA‑GTCGTTGGTGACCAAGG‑G‑GTTGAGGGCTGGTTACGGAAAAA‑CGCA‑TTGAAATTTATGGAAACC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTggg                                                                                                                        <  1:1199833/239‑1 (MQ=255)
                                                                                                                          tgtACTGCCTGAGGGTCGGCGCGCCGGTAGATAACAGCGCCAAGCTGTTCCG‑CGCGGGACAAATAAAAGTGTTAAACCCTT‑ACTTTTATT‑CCG‑AAAAAATTAAA‑GTCGTTGGTGCCAAAGG‑G‑TTTGATGGTGGTTTACCGAAAAA‑AGAA‑TTAAAAATTATGAAAACC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAAtt                                                                                                                  <  1:1193120/237‑1 (MQ=255)
                                                                                                                          atgaCTGCCTGATGCGCAGTCCGCCGGAACAAACCAACGCCAAGCTGTTCCG‑CGCCGGAAAAATGAAAGTGATAAAACCTT‑AC‑TTGTTTAACA‑AAAAAATTAAA‑GTCGTGGGTGACCAATG‑G‑TTGGATAGCTGTTTACCAAAAAA‑CGTA‑TTGAAAATTATGAAAACC‑GGGAAAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAAtt                                                                                                                  <  1:1001271/236‑1 (MQ=255)
                                                                                                                           ttACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGCGAATTc                                                                                                                 >  2:352499/1‑239 (MQ=255)
                                                                                                                            tACGTCCTGATGGGCGGTTCGCCGGTAGATAACAACGCCAAGCTGTTTCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACTTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACAAATG‑G‑GTTGATGGCTGGTTACCGGTAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GAGCTAACCGCCACTAATAACAAAATTGACGCGGTAGTTGACTCAAACGATGCCACCGCAGGTGGCGCAATTCa                                                                                                                >  1:1685062/1‑239 (MQ=255)
                                                                                                                                tCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAACC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCa                                                                                                            >  2:811080/1‑239 (MQ=255)
                                                                                                                                tCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCa                                                                                                            >  2:1070400/1‑239 (MQ=255)
                                                                                                                                 ccTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGa                                                                                                                                                                                                                                     <  2:310270/120‑1 (MQ=255)
                                                                                                                                 ccTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGCAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCCCCGCAGGTGGGGCAATTCAGGCAt                                                                                                           >  2:1198922/1‑239 (MQ=255)
                                                                                                                                 ccTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCAt                                                                                                           >  2:1328460/1‑239 (MQ=255)
                                                                                                                                          ggccTCGCCGGGAGATAACAACACCAGGCTGTTCCG‑CGCCGGAAAAAGGAAAGTGTAAAACCGTT‑ACGTTGTTT‑CGG‑AAAAAATAAAA‑GTCGTTGGTGACAAATG‑G‑GGTGAGGGCTGTTTCCCGAAAAA‑CACA‑TTAAAAATTATGAAAAGC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAgcgcg                                                                                                   <  1:63893/235‑1 (MQ=255)
                                                                                                                                            gcTCGCCGGGAGATAACAACGCCAAGCTTTTCCG‑CGCCGGAAAAATGAAAGTGTTAAAACTTG‑ACGTTTATT‑CCG‑AAAAAATTAAA‑GTCGTTGGTGACCAAGG‑G‑GTTGATGGCTGGTTACGGAAAAA‑CGCA‑TTAAAAATTATGGAAACC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCa                                                                                                 <  1:1262142/238‑1 (MQ=255)
                                                                                                                                                       aaTAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑AAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTGGAGGGCTGGTTACCGAAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAgg                                                                                     <  2:1371905/238‑1 (MQ=255)
                                                                                                                                                        aTAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAggg                                                                                    >  2:1064219/1‑239 (MQ=255)
                                                                                                                                                         taccaacGCAAAGTTGTCCCG‑AGCCGGAAAAATGAAAGTGTAAAAACCTT‑ACGTTGATT‑CCG‑AAAAAATTAAA‑GTCGTTGGTGACAAAGG‑G‑GTGGATGGCGGGTTACCGAAAAA‑CGCA‑TTAAAAATTATGAAAAAC‑GCGCAAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGa                                                                                   <  2:1166113/236‑1 (MQ=255)
                                                                                                                                                         tAACAACGCCAAGCTGTTCCG‑CGCCGGAAAAAGAAAAGTGTTAAAACCTT‑ACGTTGATC‑CCG‑AAAAAATTAAA‑GTCGTTGGTGACAAATG‑G‑GTTGATGGCTGGTTACCGAAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGa                                                                                   <  2:728836/239‑1 (MQ=255)
                                                                                                                                                         tAACAACGCCAAGCTGTTCCG‑CGACGGACAAAGGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATAAAA‑GTCGTTGGTGACCAAGG‑G‑GTTGATGGCGGGTTACCGAAAAA‑CGAA‑TTAAAAATTAGGAAAAGC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAgg                                                                                     <  2:143806/237‑1 (MQ=255)
                                                                                                                                                         gtgtaaaagaaacaggtcccG‑CGCCGAAAAAATGAAAGTGTAAAAACCTT‑ACGTTGATT‑CCG‑AAAAAATAAAA‑GTCGTTGGTGACAAATG‑G‑TTTGATGGCTGGTTCCCGAAAAA‑CGCA‑TTAAAAATTAGGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGa                                                                                   <  1:705594/221‑1 (MQ=255)
                                                                                                                                                         aaacaacGCAAAGCTGTCCCG‑CGCCGGAAAAATGAAAGTGTTAAACCCTT‑ACGTTGATT‑CCG‑AAAAAATTAAA‑GTCTTTGGTGACCAAGG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTAAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGa                                                                                   <  2:1631299/238‑1 (MQ=255)
                                                                                                                                                                ggcAAGCTGTTCCG‑CGCCGGAAAAATGAAAGTGTAAAAACCTT‑ACGTTGATT‑CCG‑AAAAAATTAAA‑GTCGTTGGTGACAAATG‑G‑GTTGATGGCTGTTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGc                                                                            <  1:601544/237‑1 (MQ=255)
                                                                                                                                                                 ccAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCa                                                                           >  2:1120855/1‑239 (MQ=255)
                                                                                                                                                                          cccG‑CGCCGAAAAAAGGAGAGTTTTAAAACTGT‑TAGTGAAGG‑CAG‑GAAAATTTAAA‑GTGGTGGGACAGTAATG‑G‑TTACATGGCTGGTTACAGAAAAA‑CTAA‑TTGAAAATTATGAAAAAC‑CCCCTATCCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGc                                                                  <  1:159251/238‑1 (MQ=255)
                                                                                                                                                                                     aCAAAGTAAAGTGTTAAAACCTA‑CCGTGGATT‑CGA‑AAAAAATAAAA‑GTCGTGGGTG‑CCAAGGTG‑TTTGATGGTGGGTAACCGAAAAC‑CGAA‑TGAAAAATTGTGGAAGAC‑GCGCAAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCg                                                         <  1:460013/238‑1 (MQ=255)
                                                                                                                                                                                         aTGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGAtc                                                     >  1:233843/1‑238 (MQ=255)
                                                                                                                                                                                            aaaagataaaaaCTTT‑GCTTTGTTT‑CCG‑GAAAAATCAAA‑TTTGTTGGTGAGAAAT‑‑G‑GTTGAAGGTTTTTTTCCCGAAAACCGCA‑TTG‑AAATTGAGGAAAACGGCGGCAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCg                                                  <  1:1399535/230‑1 (MQ=255)
                                                                                                                                                                                            aaaGTGTTAACACCTT‑ACG‑TGTGT‑CCGAGAAAAATTAAC‑GTCGTTGGTGCACAAGG‑GTGTTG‑TGGCGGGTTCCAGAAAAA‑CCAA‑TTAAAAATTAGGGAAAAC‑GCCATACCCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGc                                                 <  1:55201/239‑1 (MQ=255)
                                                                                                                                                                                            aaaGTGTAAAACCCTT‑GCGTTGATT‑CCG‑AAAAAATTAAA‑GTGGTTGGTGACCAAGG‑G‑GTTGAGGGCGGGTTACCGAAAAA‑CGCA‑TTAAAAATTATGGAAAAC‑GCTCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGc                                                 <  2:1245112/239‑1 (MQ=255)
                                                                                                                                                                                             aaGAGTTAAAGTCTTAACGTTAATA‑CGG‑AAAAAATGAAA‑GTTGTTGGTGACAAAGG‑G‑GTTTATGGTTGGTAGCCGAAAAA‑TGCA‑TTAAAAATTAGGGAAAAC‑GCTCTATCCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGc                                                 <  2:923546/239‑1 (MQ=255)
                                                                                                                                                                                              aGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAg                                               >  2:1584414/1‑239 (MQ=255)
                                                                                                                                                                                                  ttAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTAt                                           >  1:958093/1‑239 (MQ=255)
                                                                                                                                                                                                           t‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTAt                                  >  2:516223/1‑239 (MQ=255)
                                                                                                                                                                                                                   aTT‑CCG‑AAAAAATTAAA‑GGCGTGGGTGACCAAGG‑G‑GTTGATGGCTGGTTCCGGGAAAA‑CGCA‑TTGAAAATTAGGAAAAGC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGcc                           <  2:1613225/239‑1 (MQ=255)
                                                                                                                                                                                                                    tt‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCg                          >  1:204840/1‑239 (MQ=255)
                                                                                                                                                                                                                     t‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCgg                         >  2:82245/1‑239 (MQ=255)
                                                                                                                                                                                                                      ttccaaaaaaaTAAAA‑GCGTTTGGTTACCATTG‑G‑TTTGTTGGCTGGTTACGGGAAAA‑CGCA‑TTGAAATTTATGAAAAAC‑GCCCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGcc                           <  2:274208/232‑1 (MQ=255)
                                                                                                                                                                                                                            aaaaaTTAAA‑GTCGTGGGTGTCAAGTG‑G‑GTTGATGGCGGGTTACCGAAAAA‑CACA‑TTAAAAATTATGAAAAAC‑CCGCAAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACg                     <  1:1313662/238‑1 (MQ=255)
                                                                                                                                                                                                                            aaaaaTAAAA‑GTCGGTGGTGACTAATG‑T‑TTTGGTGGTTGTTTACCGTAAAA‑GTCA‑TTTAAAATTAGGGAAAAC‑GCATCAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCGCCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCGCGCAGGTATTAAACGTATTGCTGCCGGTACg                     <  2:118115/238‑1 (MQ=255)
                                                                                                                                                                                                                             aaaaTTAAA‑GTTTTGGGGCACCAGTG‑G‑GTTGATGCGTGGATGCTGAAAAA‑CAAA‑TTGAAATTTAGGGAAACC‑CAGCAAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCa                   <  1:1551190/239‑1 (MQ=255)
                                                                                                                                                                                                                             aaaaTAAAT‑GTGGTTGTGGA‑CAATG‑G‑GGTGACCGCGGGGTACCTGAAAA‑AGGATTTAAAAATTATGAAAACG‑GGGTTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCa                   <  1:1122098/239‑1 (MQ=255)
                                                                                                                                                                                                                             aaaaTAAAA‑GTTGTTGGTAACAAATG‑G‑GTTGATGGATGTTTACCGAAAAA‑CGCA‑TTGAAAATTATGAAAACC‑GCGCAAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCa                   <  1:1443260/239‑1 (MQ=255)
                                                                                                                                                                                                                              aaaTTAAAGGTCGTGGGTGCCAAATG‑G‑GTTGATGGCGGGTTACCGAAAAA‑CCAC‑TTAAAAATAAGGAAAAAC‑GTGCAAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCa                   <  1:1450202/239‑1 (MQ=255)
                                                                                                                                                                                                                                        tCGTTGGTGAACAGTG‑G‑GTTGATGGCTGTTTACGAGAAAA‑CGCT‑TTGAAAATAAAGGAAAAC‑GCGATAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACg         <  2:1685062/239‑1 (MQ=255)
                                                                                                                                                                                                                                         tggtGGTGACAAATG‑G‑GTTGAGGGATGTTTACCGAAAAA‑CTCA‑TTGAAAATTATGAAAAAC‑CCCCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACg         <  1:1703440/235‑1 (MQ=255)
                                                                                                                                                                                                                                         cgtgtgttaCCAAGG‑G‑GTTAATGGCAGGTCACCAAAAAA‑AGCA‑TAGAAAATTATGGAAACC‑GCTATAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACg         <  1:1578234/230‑1 (MQ=255)
                                                                                                                                                                                                                                         cgtggggaaCCATTG‑G‑TTGGATGGATGGTCACCGAAAAA‑CGCA‑TGAAAAAGTATGGAAACC‑GCGCAAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACg         <  1:590241/230‑1 (MQ=255)
                                                                                                                                                                                                                                         cGTTGGTGACCAAGG‑G‑GTTGAGGGCTGGTTACCGAAAAA‑CGAA‑TTAAAAATTATGGAAAAC‑GCGCAACCCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACg         <  1:1120855/238‑1 (MQ=255)
                                                                                                                                                                                                                                         cGTTGGTGACAAAGG‑G‑GTTGATGGCTGTTTCCCGAAAAA‑CGAA‑TTAAAAATTATGAAAACC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGAc          <  2:1558122/237‑1 (MQ=255)
                                                                                                                                                                                                                                         cGTGGGTGACCAAGG‑G‑GTTGATGGTTGGTTACCGAAAAA‑CACA‑TTGAAATTTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACg         <  1:1505364/238‑1 (MQ=255)
                                                                                                                                                                                                                                          gttgggtgccAAGG‑G‑GTTTAGGGGTGGTTTCAGGAAAACCGAA‑TTAAAAATTAGGAAAACC‑GCACAAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACg         <  1:343727/230‑1 (MQ=255)
                                                                                                                                                                                                                                               agACCAAGG‑G‑TTTGCTGGCTGGTTACGGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGtat   <  2:1442405/237‑1 (MQ=255)
                                                                                                                                                                                                                                                gACAAATG‑G‑GTTGATGGCTGGTTACGAGAAAA‑CGCA‑TTAAAAATTAGGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGtata  <  1:1064219/238‑1 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                               
TAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCG‑CGCCGGACAAATGAAAGTGTTAAAACCTT‑ACGTTGATT‑CCG‑GAAAAATTAAA‑GTCGTTGGTGACCAATG‑G‑GTTGATGGCTGGTTACCGGAAAA‑CGCA‑TTGAAAATTATGGAAAAC‑GCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATA  >  NC_000913/3731450‑3731922

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑