BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	3,760,388	A→C	14.0%	S287R (AGT→AGG)	selA ←	selenocysteine synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,760,388	0	A	C	14.0%	290.7 / 7.5	138	S287R (AGT→AGG)	selA	selenocysteine synthase
Reads supporting (aligned to +/- strand): ref base A (72/41); new base C (3/20); total (76/62)
Fisher's exact test for biased strand distribution p-value = 1.24e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 140 total aligned reads displayed.

GAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTTTCATTCACCGCCTGACGATAATCATTC  >  NC_000913/3760156‑3760625

aaaTGCCCGCTGGGCGGGGGGTAGGAGGGCGGAGGGGCGGTAATTTTCCCCCCAGAGCTTCAGGTTGAAAAAAAGGACGCACGGGGGCTCCCAGCGCGGCGAGGTTCATTTAACCCGCGCGTAATGCAGGCTTCAGGGGGGGGCTTGGCGGGGGGGCAATCATCTCTTTTTTACCAAC‑AATAATTCCGGCCTGC‑GGCCCG‑CCTAAAAC‑CT‑TGTCGCCGGAAAAACTCCCCAG‑AC‑TGCcg                                                                                                                                                                                                                                           <  1:39077/238‑1 (MQ=255)

 aaTGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTCTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGAcg                                                                                                                                                                                                                                           >  2:1324297/1‑238 (MQ=255)

       cttggcgtggcggaaaagagggggcAGGGTCGGTAATTTTCCCCTCAGAGCTTCAGGGTTAAAAAAAAGACGCAACGTGCCTCCCAGCGCCGCGAGGGTCATTTTACCCGCGCGTAATGCCCGTTTCAGCGGGTGGCTTTGCAGGCGGGCGATCTTCTTTTTTTTACCAAC‑AATATTTCCTGCCTGC‑GCCCCG‑CCTAAAAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCccgccg                                                                                                                                                                                                                                    <  1:768485/216‑1 (MQ=255)

               tgcgGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGGTCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCCAACAA‑CT‑TGGCGCCGGAGAAACTCACCAG‑AC‑TGACCCCCGCCGCCATCaa                                                                                                                                                                                                                             >  1:1491714/1‑238 (MQ=255)

                 cgGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACt                                                                                                                                                                                                                           >  2:1039300/1‑238 (MQ=255)

                    gTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑AC‑TGTCGCCCGAGAAACTCACCCG‑AC‑TGACGCCCGCCCCCAACAACTCCt                                                                                                                                                                                                                        >  1:828555/1‑238 (MQ=255)

                           ggCGCAGGGGCGGGAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGGCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCCGGCGGGGGGTCATACCTTTTTTTACCAC‑AAAAAATCCCTCCTGCGGGCCCG‑CTACCCAA‑CT‑TG‑CCCCCGAGCAACTCACCCC‑AC‑TGTCGCCccccgcccgtccaccccggggcgct                                                                                                                                                                                                                >  1:790791/1‑220 (MQ=255)

                           ggCGCAGGGGCGGGAATTTTTCACTCAGAGCTTCAGGGGGGAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGGCATTTTATCCGCGCGGAAAGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGGGGTCATCTCTTTTTTTTCAACAAAAAATTCCT‑CCTTC‑GGGCCGCCCTAAAAA‑C‑‑TGTTGCCCGGGAAAATCACCAA‑GC‑CTAcgcccgcccccacccacaccctcggcctt                                                                                                                                                                                                                >  1:1613695/1‑218 (MQ=255)

                              gcAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCCCCATCAACTCCTGCGGCATTgg                                                                                                                                                                                                              >  2:584190/1‑238 (MQ=255)

                                      ggTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑g                                                                                                                                                                                                     >  2:1342721/1‑238 (MQ=255)

                                      ggTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑g                                                                                                                                                                                                     >  2:665680/1‑238 (MQ=255)

                                            ttttCACTCAGAGCTTCAGGTGGAAAATAAAGACACACCGGGGCTCCCAGCGCCGCGGGGGTATTTTTATCCGGGCGTAATGCCCGCTTCAGCGGGGGGCTTTGCAGGGGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAAAAA‑CT‑TGTCGCGGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCaaa                                                                                                                                                                                                <  1:414127/237‑1 (MQ=255)

                                              ttCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CC‑TTTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCCCAATCCACTCCTGCGGCATTGGCCCTTTC‑GGCAAACCg                                                                                                                                                                                             >  1:1473424/1‑238 (MQ=255)

                                               tccccaagagCTGCGGGGTGTAAATAAAGACGCAGGGTGGCTTCCGCGGCCGCGGGGGTCATTTTACCCGCGCGTAATGCACGCTCAAGTGGGTGGTTTTGCGGGGGGGCGATCATCTCTTTTTTCCAAAA‑AATAATCCCGGCCTGC‑GCCCCC‑CATAACAC‑CT‑TGTCGCGGGAGAAACTCACCAG‑AC‑GGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTa                                                                                                                                                                                           <  1:1558780/233‑1 (MQ=255)

                                               tCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTa                                                                                                                                                                                           <  2:337458/239‑1 (MQ=255)

                                                cACCCAGAGCGTCGGGGTGAAAATAAAGACGCAACGGGGCTCCCGCGGCCGCGAGGTTAATTTTACCCGCGGGTAATGCACGCTCCAGGGGGTGTCTTGGCGGGCGGGCGATCTTCTCTTTTTTCCCAAC‑AATAATTCCTGCCTGC‑GCCCCG‑CCTAACAA‑CT‑TGGCGCGGGAGAAACTCACCAG‑CC‑TGCCGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTAc                                                                                                                                                                                          <  1:101769/239‑1 (MQ=255)

                                                            cAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGGTCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCCGAGAAACTCAACCA‑AC‑TGACCCCCGCCGCAATCCACTCCTGCGGAATCGGCTCTTTC‑GGCAAACCGCACTGGCTAACATcc                                                                                                                                                                              >  1:1099535/1‑238 (MQ=255)

                                                                 tgtAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGGTCATCTCTTTTTTACCAAA‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CC‑TGTCGCCGGAGAAACTCACCCG‑AC‑TGACGCCCGCCGCAATCAACTCCCGCGGCACTGGCTCTTTCGGGCAAAcgccccgtccaaaatcgcaca                                                                                                                                                                           >  1:195421/1‑218 (MQ=255)

                                                                 tgtAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTTCCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGGCGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCa                                                                                                                                                                          >  1:1139623/1‑238 (MQ=255)

                                                                 tgtAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TTTCGCCCGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCCACCCCCGCGGCCTTGGCTCTTTC‑GGCCAACCGATCTTGCCAAAGTCGACCa                                                                                                                                                                          >  1:1526279/1‑238 (MQ=255)

                                                                 tgtAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAAACCGACCa                                                                                                                                                                          >  2:767373/1‑238 (MQ=255)

                                                                 tgtAAAAAAAGACGCAACGTGGCTTCCAGCGGCGCGAGGGGCATTTTATCCGCGCGTAATGCCCGCTTCAGCGGGTGGTTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCGGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCCCCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCa                                                                                                                                                                          <  2:1644323/238‑1 (MQ=255)

                                                                   taaataaaGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCg                                                                                                                                                                       >  2:1539888/1‑239 (MQ=255)

                                                                    aaataaaGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGa                                                                                                                                                                      >  2:681365/1‑239 (MQ=255)

                                                                        aaaGACGCACCGTGGCTTCCGGCGCCGGGGGTGTGTTTTTATCCCCTCGTAATGCCCGCTACAGCGGGTGGCTTTGCGGGCGGGAGATCATCTCTTTTTCACCAAA‑AATAATTCCGTCCGGC‑GCCCCG‑CCTAACAT‑CT‑TGTCGCCGGAAAACCCCCCCAG‑CC‑TGCCCCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCa                                                                                                                                                                  <  1:451212/239‑1 (MQ=255)

                                                                         aaGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGGACTGGCTAAGATCGACCAGCGAAccc                                                                                                                                                                  >  2:1313183/1‑237 (MQ=255)

                                                                             cGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑AT‑TGTCGCCGGAGAAAATCACCAG‑CC‑TGACGCCCCCCCCAATCAACTCCTGCGGCCTTGGCCCTTTC‑GGCAAAACGTACTGGCTAAGATCGACCCGCGAGCCACTGc                                                                                                                                                              >  1:1624852/1‑238 (MQ=255)

                                                                              gCAACGTGGCTCCCAGCGCCGCGGGGGTCATTTTACCCGCGCGTAATGCACGCTTCAGCGGGTGGTTTTGCAGGGGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAC‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCt                                                                                                                                                            <  2:146623/239‑1 (MQ=255)

                                                                               cAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTTCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCCATCAACTCCTGCGGCATTGGCTCTTTA‑CGCAAACCCTACTGCCTCAAATCGccccactgcaccctcccca                                                                                                                                                           >  1:247798/1‑223 (MQ=255)

                                                                                aaCGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCACCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TATCGCCGGCACAACTCACCAC‑AC‑CCACGCCCGCCGCACACAACTCCTGCCGCATTTGCTCTTTC‑CGCCAACCGGACTTGCCAAAATcccccccccagcccccccccaa                                                                                                                                                          >  1:1113250/1‑218 (MQ=255)

                                                                                       cTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCCAC‑AATAATTCCCTCCTGC‑GGCCCC‑CCTAACAA‑CT‑TTTCGCCGGAGAAACTCACCAG‑AC‑CGACCCCCGCCGCAATCCACTCCTCCGGCACTGGCTCCTTC‑GGCCACCCGTACTTGCTAAAATCGTCCCGCCGCCCACCGCCCAACTCAGt                                                                                                                                                    >  1:6576/1‑238 (MQ=255)

                                                                                              cgccgcGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCC‑CCTAACAA‑CT‑TGTCGCCGGAGAAAATCACCAG‑AC‑TGACGCCCGCCCCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACgg                                                                                                                                            >  2:278158/1‑239 (MQ=255)

                                                                                                ccgcGGGGTTCTTTTTATCCGGGCGTAATGCACCCTTCAGGGGGTGGTTTTGCAGGCGGGCGATCATCTTTTTTTTACAAAC‑AAAAATCCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCCCCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑a                                                                                                                                         <  2:910104/239‑1 (MQ=255)

                                                                                                           aTTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑AT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGa                                                                                                                                                                                 >  2:533889/1‑189 (MQ=255)

                                                                                                                  ccGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCg                                                                                                                       >  2:274090/1‑239 (MQ=255)

                                                                                                                      gcgTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCCAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑GACATCCAGCTCTTTGCCGAgc                                                                                                                    >  2:1559774/1‑238 (MQ=255)

                                                                                                                       cgTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGCGAAAATCAACAG‑AA‑TGGCGCCCGCCGCAATCAACTCCTTCGGCATTGGCTCTTTT‑TGCAAACCGTACCGGCTAAGACCGACCCGCGAGGCAATCCCTAAAACACGCACCACGGGCAACACCCA‑CTCATTGcccggcc                                                                                                                   >  1:130713/1‑233 (MQ=255)

                                                                                                                       cgTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCa                                                                                                                                                                  <  2:144625/192‑1 (MQ=255)

                                                                                                                        gTAATGCACGCTGCAGCGGGTGGCTTTGCAGGCGGGGGATCATCTTTTTTTTACCAAC‑AATAATCCCGGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGGCGGAGAACCTCCCCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTa                                                                                                                                                                                           <  1:1358678/166‑1 (MQ=255)

                                                                                                                               accctgcggCGGGGGGTTTGGCGGGGGGCCGACCACTTTTTTTTTACCAAA‑AAAAATCCCGGCCGGC‑GCCCCG‑CCAAACAA‑CT‑TGTCGCGGGAGAAACTCACAAG‑CC‑GGCCGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGtt                                                                                                          <  1:1039300/231‑1 (MQ=255)

                                                                                                                                  cTTCAGCGGGTGGCTTTGCAGGCGGGCGCTCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TTTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCCTTGGCTCTTTC‑GGCAAACCCTACTGGCCAAGa                                                                                                                                                                                 >  2:1358678/1‑166 (MQ=255)

                                                                                                                                   ttCAGGGGGTGGCTTGGCGGGCGGGCGATCATCTTTTTTTTACCAAC‑AATAATCCCGGCCGGC‑GCCCCG‑CCAAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTa                                                                                                                                                                                    <  1:1718502/162‑1 (MQ=255)

                                                                                                                                   tcggggggggggCTTTGCGGGCGGCCTACCCCCTTTTTTTCACAACC‑AAAACTCCCCGCCGGG‑CCCCCC‑CCTAAAAA‑CT‑TTCCGCCGGAAAAACCCACCAG‑CC‑GGCCCCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCg                                                                                                       <  1:440535/232‑1 (MQ=255)

                                                                                                                                    tCAGCGGGTGCTTTTCGGGGCGGGCGACTACCTCTTTTTTACAAAC‑ACAATTATCTCCCT‑C‑GCCCCC‑GTCAACAATTT‑TGCCGCCGGAAAACCCCCCCAT‑AC‑TGCCGCCCGCCGCAATCAGCTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCt                                                                                                     <  1:1223033/239‑1 (MQ=255)

                                                                                                                                      aGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCCGCTCTTTGCCGAGCGCCACCAGTTCCGCtt                                                                                                    >  2:938834/1‑238 (MQ=255)

                                                                                                                                        cGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGGGCGCCACCAGTTCCGCTTCa                                                                                                  >  2:1188396/1‑238 (MQ=255)

                                                                                                                                           gTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTACTTGCCCAGCGCCACCAGTTCCGCTTCATCTa                                                                                              >  1:581408/1‑239 (MQ=255)

                                                                                                                                           acaagttgttaGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTa                                                                                              >  1:14399/11‑239 (MQ=255)

                                                                                                                                            tGGCTTTGCAGGCGGCCGATCTTCTTTTTTTTACAAAC‑AATAATCCCTGCCGGC‑GGCCCG‑CCTAACAA‑CT‑GGTCGCCGGAGAACCTCCCCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTa                                                                                              <  2:828555/238‑1 (MQ=255)

                                                                                                                                             ggCTTTGCAGGCGGGCGGTCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAAAAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCCGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTAt                                                                                             >  2:440535/1‑238 (MQ=255)

                                                                                                                                             ggCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATTATTCCTGCCAGC‑GGCCCG‑CCTAACAA‑CT‑TATCGCCGGAGAAAAACACCAG‑AC‑TGACGCCCGCCGCAATCAAATCCTGCGGCATTAGCTCTTTC‑GGCAAACCGAACTAGCTAAGATAGACCCGAGGGGCACCGCCTCAATCACGCCCTACGGG‑AACATCAAGCTCTTTTGCGAGCGCCACCAGTTCCGCTTCCTCTATc                                                                                            >  1:1465251/1‑239 (MQ=255)

                                                                                                                                             ggCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCa                                                                                                                                                                          >  2:1718502/1‑162 (MQ=255)

                                                                                                                                             ggCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATc                                                                                            >  2:1512070/1‑239 (MQ=255)

                                                                                                                                             ggCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATc                                                                                            >  2:1420652/1‑239 (MQ=255)

                                                                                                                                               cTTTGCAGGCGGGCGCTCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCC‑CCTCACAA‑CC‑TGTCGCCCGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTT‑GGCAAACCGTACTGGTTAAGATTGCCCAGCGCCGCCCTGCCTAAACCAGTCACCACGGG‑AACATCCAGCTCCTTGCCTACCGCCACCCGTTTCCCTTCCTCTaacct                                                                                          >  1:637926/1‑235 (MQ=255)

                                                                                                                                                      gggggggtatcaccTGTTTTTCACAAAA‑AAAATTTCCCGCCTGG‑GGCCCG‑CCTAAAAT‑CT‑TCTCGCCGGAGAACCTCCCCAA‑CC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGt                                                                                    <  1:1534121/230‑1 (MQ=255)

                                                                                                                                                       gcgggcgATCATCTCTTTTTTACAAAC‑AATAATCCCTGCCTGC‑GCCCCG‑CCTAACAA‑CT‑TGCCGCGGGAGAACCTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTg                                                                                   <  2:1624852/238‑1 (MQ=255)

                                                                                                                                                          ggcgATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTa                                                                                                                                                                                           >  1:608014/1‑132 (MQ=255)

                                                                                                                                                             gctcaccTCTTTTCCACCAAC‑AAAATTCCCCGCCCGC‑GCCCCG‑CCAAACAT‑CT‑TGTCGGCGGAGAACCTCACCAG‑AC‑TCACCCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCt                                                                            <  1:681365/237‑1 (MQ=255)

                                                                                                                                                             gaccatcTCTTTTTTACCAAC‑AATACTCCCTGCCGGC‑GCCCCG‑CCTAACAC‑CT‑TGCCCCCGGAAAAACTCACCAG‑CC‑GGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCt                                                                            <  2:790791/236‑1 (MQ=255)

                                                                                                                                                             gATCATCTTTTTTTTACCAAA‑AATAATCCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑GGTCGCGGGAAAACCTCCCCAG‑CC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCt                                                                            <  2:1491714/239‑1 (MQ=255)

                                                                                                                                                              atcctttttttgttACCAAC‑AAAAAATCCCGGCCTC‑TCCCCC‑CCTAACAA‑CTGCGCCCCGGGAAAAACCCTCCCG‑CC‑TCCCCCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCt                                                                            <  1:997706/231‑1 (MQ=255)

                                                                                                                                                                    tctTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCGGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCt                                                                     <  2:884568/239‑1 (MQ=255)

                                                                                                                                                                        ttttACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAg                                                                 >  1:1441709/1‑239 (MQ=255)

                                                                                                                                                                         tttACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGt                                                                >  2:173677/1‑239 (MQ=255)

                                                                                                                                                                         ttcacaaac‑aaTAATCCCTGCCGGC‑GCCCCG‑CCTAAAAC‑CT‑TGCCCCCGGAAAAACCCCCCAG‑AC‑GGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGt                                                                <  1:278158/233‑1 (MQ=255)

                                                                                                                                                                         ttcaCCAAC‑AATAATCCCCGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACCCCCCAA‑GC‑AGACCCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGt                                                                <  2:195421/236‑1 (MQ=255)

                                                                                                                                                                         ttaaCCAAC‑AATAATCCCCGCCGGC‑GGCCCG‑CCTAACAA‑CT‑GGCCGCGGGAGAAACTCACCAG‑CC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGt                                                                <  2:869867/236‑1 (MQ=255)

                                                                                                                                                                           tACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGtt                                                               >  2:250434/1‑238 (MQ=255)

                                                                                                                                                                           tACCAAC‑AAAAATTCCTGCCGGC‑GGCCCC‑CCTAACAA‑CT‑GTCCGCGGGAAAACCCCCCCAG‑CC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTa                                                              <  2:930173/239‑1 (MQ=255)

                                                                                                                                                                           ccccAAC‑AAAACTCCCCGCCGGC‑GCCCCG‑CCTAACAC‑CT‑TGTCGCCGGAGAAACTCCCCAG‑AC‑TGCCGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTa                                                              <  2:603387/237‑1 (MQ=255)

                                                                                                                                                                             acccacaaacactccctcctgc‑CGCCCC‑CCCAACCA‑CT‑TTGCGGCGGCATAACCCCCCAA‑ACGTGCCGCCCGCCGCAATCAACTCCGGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCTGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTa                                                              <  1:1215231/222‑1 (MQ=255)

                                                                                                                                                                                      atttCCTGCCGTG‑GCCCCG‑CACAACAA‑CT‑TGTCGCCAGAGACTCTCCCCAG‑CC‑TGCCGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTa                                                    <  2:593726/237‑1 (MQ=255)

                                                                                                                                                                                      actccctgccggC‑GGCCCG‑CATAACAC‑CT‑GGCCGCGGGAAAAACCCCCCAG‑AC‑GGCCGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTa                                                    <  1:1554890/235‑1 (MQ=255)

                                                                                                                                                                                      aatCCCTGCCTGC‑GGCCCG‑CCTAACAC‑CT‑GGTCGCCGGAGAAACCCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTa                                                    <  2:355184/239‑1 (MQ=255)

                                                                                                                                                                                      aacccctgccggC‑GGCCCG‑CCTAACAA‑CT‑TGGCCCCGGAGAACCCCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTa                                                    <  2:1354115/235‑1 (MQ=255)

                                                                                                                                                                                        tccctgccggC‑GGCCCG‑CATAACAA‑CT‑GGCCGCCGGAAAAACTCACCAG‑AC‑TGCCGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACt                                                  <  2:1473424/237‑1 (MQ=255)

                                                                                                                                                                                             gcctgc‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTtca                                              >  2:1261924/1‑238 (MQ=255)

                                                                                                                                                                                             gcctgc‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTtca                                              >  2:799228/1‑238 (MQ=255)

                                                                                                                                                                                             gcctgc‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTtca                                              >  1:1022698/1‑238 (MQ=255)

                                                                                                                                                                                             gcctgc‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTtca                                              >  1:1169991/1‑238 (MQ=255)

                                                                                                                                                                                             gcctgc‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTtca                                              >  2:1542166/1‑238 (MQ=255)

                                                                                                                                                                                             gcctgc‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTtca                                              >  1:495010/1‑238 (MQ=255)

                                                                                                                                                                                             gcctgc‑GGCCCG‑CCTAACAA‑CT‑TGTCCCCGGAGAAACCCCCCAG‑AC‑GGACCCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTtcat                                             <  1:173677/239‑1 (MQ=255)

                                                                                                                                                                                               cggc‑GTCCCG‑CTTAAAAA‑CT‑TGCCGCCGAAAAAACCCCCAAG‑CC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTtcatca                                           <  2:247798/237‑1 (MQ=255)

                                                                                                                                                                                                  c‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑CC‑TGACGCCCGCCGCACTCAACTCCTGCGGAATTGGCTCTTTC‑TGCAAACCGTACTGTCTAAGACCGACCATCGAGCCACTGCCTACATCAGTCACTACGGG‑AACATCCAGCTCTTTCCCGCGCGCAACCAGTTCCGCTTCATCTATCCCTTTAGAGAACCCCTGAATGCTGTAGTTACTGGTATGTACTCTCATCAACa                                        >  1:990297/1‑239 (MQ=255)

                                                                                                                                                                                                  c‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACa                                        >  2:536168/1‑239 (MQ=255)

                                                                                                                                                                                                  c‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACa                                        >  2:446555/1‑239 (MQ=255)

                                                                                                                                                                                                           ccTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGt                                 >  2:237010/1‑239 (MQ=255)

                                                                                                                                                                                                            cTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTa                                >  1:1056921/1‑239 (MQ=255)

                                                                                                                                                                                                                     t‑tGGCGCGGGAGAACCCCCCCAG‑AC‑GCACCCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTttcatt                        <  1:1362537/239‑1 (MQ=255)

                                                                                                                                                                                                                      ttgccccgggAGAACCCCACCAA‑CC‑TGCCCCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTttcatt                        <  1:938834/231‑1 (MQ=255)

                                                                                                                                                                                                                       tGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTttcattc                       >  2:1362537/1‑239 (MQ=255)

                                                                                                                                                                                                                        gTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTttcattc                       >  2:1164300/1‑238 (MQ=255)

                                                                                                                                                                                                                           gCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTTTCATTCAcc                    >  2:743583/1‑238 (MQ=255)

                                                                                                                                                                                                                              ggAGAAACTCCCCAC‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTTTCATTCACCGCCt                <  2:130713/239‑1 (MQ=255)

                                                                                                                                                                                                                                 gaAACTCACCAG‑AC‑TGACCCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTTTCATTCACCGCCTGa              <  2:1452244/238‑1 (MQ=255)

                                                                                                                                                                                                                                 acaaCTCCCCAGAAC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTTTCATTCACCGcc                 <  1:144769/234‑1 (MQ=255)

                                                                                                                                                                                                                                    acgccccAG‑CC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTTTCATTCACCGCCTGACGAt          <  2:384005/234‑1 (MQ=255)

                                                                                                                                                                                                                                              aC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTTTCATTCACCGCCTGACGATAATCATTc  >  1:586093/1‑238 (MQ=255)

GAATGACCTCTGCGCTGCGGGTAAGCAGGCGCAGGGTCGGTAATTTTTCACTCAGAGCTTCAGGGTGTAAATAAAGACGCAACGTGGCTTCCAGCGCCGCGAGGGTCATTTTATCCGCGCGTAATGCACGCTTCAGCGGGTGGCTTTGCAGGCGGGCGATCATCTCTTTTTTACCAAC‑AATAATTCCTGCCTGC‑GGCCCG‑CCTAACAA‑CT‑TGTCGCCGGAGAAACTCACCAG‑AC‑TGACGCCCGCCGCAATCAACTCCTGCGGCATTGGCTCTTTC‑GGCAAACCGTACTGGCTAAGATCGACCAGCGAGCCACTGCCTAAATCAGTCACTACGGG‑AACATCCAGCTCTTTGCCGAGCGCCACCAGTTCCGCTTCATCTATCGCTTTGGTGAACCCCTGAATGCTGTAGTTACTGGTATGTACTTTCATCAACAGTGCGGTATTTTCATTCACCGCCTGACGATAATCATTC  >  NC_000913/3760156‑3760625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`