Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	3,862,669	T→A	25.8%	pseudogene (934/1617 nt)	glvC ←	pseudogene, arbutin specific enzyme IIC component of PTS,enzyme, Transport of small molecules: Carbohydrates, organic acids, alcohols, PTS system, arbutin‑like IIB component, PTS system, arbutin‑like IIC component

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,862,669	0	T	A	25.8%	93.4 / 17.9	97	pseudogene (934/1617 nt)	glvC	pseudogene, arbutin specific enzyme IIC component of PTS,enzyme, Transport of small molecules: Carbohydrates, organic acids, alcohols, PTS system, arbutin‑like IIB component, PTS system, arbutin‑like IIC component
Reads supporting (aligned to +/- strand):  ref base T (26/34);  new base A (15/6);  total (45/52)
Fisher's exact test for biased strand distribution p-value = 4.15e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01

ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAA  >  NC_000913/3862434‑3862903                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                        aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTTA‑GG‑GTGCGGGGA‑TCa                                                                                                                                                                                                                                                       >  2:1540977/1‑238 (MQ=255)  tttGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑c                                                                                                                                                                                                                                                    <  2:1343425/239‑1 (MQ=255)                      gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAAGGG‑TTGGGGGAA‑‑CAG‑C‑AAG‑GCCGCCC‑CTTTTA‑ccc                                                                                                                                                                                                                             >  2:1062081/1‑238 (MQ=255)                      gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GTTA‑AG‑TTTCTGGAA‑TCAG‑C‑AAA‑CCCCCCC‑CTTTTT‑ccc                                                                                                                                                                                                                             >  2:203975/1‑238 (MQ=255)                       cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GTTA‑AG‑TTGTGGGGA‑TCAA‑C‑AAGCCCCCCCC‑CTTTTA‑cc                                                                                                                                                                                                                              >  1:992510/1‑237 (MQ=255)                       cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GTAA‑GGTTTGGGGGAA‑taccaaaaccacccccttttacc                                                                                                                                                                                                                                   >  1:704548/1‑215 (MQ=255)                       cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑ATAA‑GG‑GTGGGGGAA‑ACAC‑C‑AAGCCCCGCCC‑TTTTTA‑ccga                                                                                                                                                                                                                            >  2:880466/1‑237 (MQ=255)                         tGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTTA‑GG‑TTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCC‑CTTTTT‑CCCCAtt                                                                                                                                                                                                                         >  2:964818/1‑239 (MQ=255)                           gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GGTTTGCGGG‑A‑TTAA‑C‑AAG‑CCCCCCC‑CCTTTT‑ACCGGtttt                                                                                                                                                                                                                       >  2:1355815/1‑239 (MQ=255)                           gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGGA‑TCAG‑G‑AAA‑CCCGCCACCTTTTC‑CCCGAttt                                                                                                                                                                                                                        >  2:511002/1‑239 (MQ=255)                            ttGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑AG‑TTTCGGGAA‑TCCG‑C‑AAA‑CCCCCCA‑CCTTTT‑ACCGGtttt                                                                                                                                                                                                                       >  2:43569/1‑238 (MQ=255)                                  caccacgggtaccATTTTTGGGGAAAAAC‑CGAATCAAACCGGCCCCCCCCCATTGTACCCCACCACCCCAAAGAAATAAATT‑CGGGCGAACTTTGGGCCCGC‑CACCACGGGGTGCACCGC‑AAACACCAGCGGAGAAATGAAAAGGAAGGAAAATCCCAGGGGTTGGTT‑ATTCCCCCCCGGTAGGGCGG‑TTAG‑GG‑TGGCGGGAT‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTg                                                                                                                                                                                                                 <  1:230037/228‑1 (MQ=255)                                    caccggaggccATTTTGGCAGAAAAAC‑CTACCAAAGCAGCCCCCCGCCCA‑TGTCCCCCCCCCACCCAAAGGGATACTTTACGGTAG‑ACGTGGAGGCCGC‑CGGCACGTGGT‑TTCCGCAAAACAGCACGGGTGAAATAACCGGGAGGGAAATTTCCAGCGGTTGGGT‑ACTCCCCACCATCATGGCGG‑TTAG‑GG‑TGGCGGGAA‑TCAA‑A‑AAC‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCgg                                                                                                                                                                                                              <  1:713343/230‑1 (MQ=255)                                     cctgggactcgtgtttGCGGAAAAACACTAGACAATCGGCCCCCCCCCCG‑GTTTGCCCCCCACACAAAAGAAACACTTGAC‑GTCGAACATGGA‑GCCGCTCAGCCCGGCGTGAGCCGC‑AAACACAAACGGTGAAATGAACAGGAAGGTAAATCCCAGGGGTCCGGT‑AATCCCCCCCAGCAGGGCGG‑TTAA‑GG‑TTGCGGAAA‑TCAG‑C‑AAC‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCgg                                                                                                                                                                                                              <  1:1632544/226‑1 (MQ=255)                                       cGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTTA‑GG‑ATGGGGGGA‑ACAG‑C‑AAA‑CCCCCCC‑CTTTTT‑CCCCCTTTTCCgtggtggcgg                                                                                                                                                                                                           >  2:1107280/1‑230 (MQ=255)                                       cGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGAA‑TCAG‑C‑AAA‑CCCCCCC‑CTTTTA‑CCCGATTTTCTGGTGCGG‑ccg                                                                                                                                                                                                          >  2:463308/1‑237 (MQ=255)                                               aGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GGAA‑AG‑GTGCGGGGA‑TCAA‑CAAAA‑CCCCCCC‑CTTTTC‑CCCGATTTTcgtgggggcgatgggaga                                                                                                                                                                                                     >  1:1584884/1‑221 (MQ=255)                                                   ttGCGGTAACAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGA‑AATTACCACCAGCATGGCGG‑GTAA‑GG‑GTGCGGGGA‑GCAA‑C‑AAC‑CCCACCA‑CGTTTA‑CACCATTTTCCTGTTCGG‑cgggagaggacaag                                                                                                                                                                                               >  1:694290/1‑225 (MQ=255)                                                   ttGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGGA‑TCAA‑C‑CAG‑ACCGCCA‑CTTTTA‑CCCCCTTTTTCGGGGGGG‑CAGGGGAGTACaac                                                                                                                                                                                               >  1:840986/1‑236 (MQ=255)                                                      cGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCC‑CCTTTA‑CCCCCTTTTTCGGGGCGG‑CAGTGAAGTACACCGCtc                                                                                                                                                                                           >  2:1501010/1‑238 (MQ=255)                                                      cGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑AG‑GTGCGGGGA‑AAAC‑G‑AAA‑CCCCCCC‑CTTTTT‑CCCCCTTTTTCGGTGCGG‑CAgcggagggcaacccca                                                                                                                                                                                           >  1:363399/1‑224 (MQ=255)                                                       cggaaatccagatacatccAGCCCCCCCCCCG‑TGTGCCCCCCCACAACAAGGAGATCCATTAGGGGGG‑TCATGGAGCGCGC‑CAGCGCGTCGGGTACCGC‑AGACAGAGAGGGTAAAAGAAAAGGGGAGGTAAA‑TCCAGGGGGGGGGTGAACTCCCCCCGGAAGGGCGT‑TGAG‑GG‑GTGCGGGAA‑ACAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCt                                                                                                                                                                                            <  1:402425/220‑1 (MQ=255)                                                                 tagacaaccaccccTCCCCCCA‑TTTCGCCCCCCACACAAAAGATATACATCACGGTCG‑AAATTGAGGCCGC‑CAGCAGGGCGTGTCCCGC‑AAACAGCAACGGAGAAATGAACAGGAAGATAATTCCGAGCGGTTCGGT‑AATCCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGAAA‑TCAG‑C‑AAC‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGcc                                                                                                                                                                                <  1:1246597/227‑1 (MQ=255)                                                                     cAACCAGCCCCCCCCCCT‑TGTCCCCCCCCACCACAAAGAAAATCATTGCGGCCG‑AAATTGGGGCCGC‑AAGCACGGGGGTTCCCGA‑AAACAGCAACGGGGAAATGAACAGGAGGATAAATCCCGGGGGTTCGTT‑AATCCCCCCCAGCATGGCGG‑TTAA‑GG‑TGGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCa                                                                                                                                                                              <  1:799732/237‑1 (MQ=255)                                                                                      cgtgtcccccACCCCCCAAAAAAGAAACATCGCGGCGG‑ATATGGGGGCCGC‑CAGCACGGGTTGTACCGA‑AAACAGAAGGGGGGAAATGAACAGGAAGGAAATTTCCAGCGGTTCGGT‑AATCCCCCCCAGCAGGGGGG‑TTAG‑GG‑TTGGGGGAA‑CAAG‑C‑AAC‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCGCGG‑CA‑CCAAAGATTTTTg                                                                                                                                                          <  1:1318120/232‑1 (MQ=255)                                                                                      aagttagccacccacaccaAAGAAATAATTTAGGTTGG‑AAATGGAGGCCGC‑AAGCCGGGGGGAAACCAC‑AAACTGCAATGGAAAAGTGAACGGGAAGAAAAATCCCATCGGTACGGT‑AATCCCCACCTGAAGGTCGT‑TTAA‑GG‑GTGGGGGAA‑GAAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTg                                                                                                                                                          <  1:396549/228‑1 (MQ=255)                                                                                      a‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GTAA‑AG‑GTGGGGGGA‑AGAA‑C‑AAA‑CCCGCCC‑CATTTA‑CCCCATTTTTCCGTGCGG‑CCGGGAAGGACATCCCTTAAAAAA‑TGCACCAGG‑GA‑CCCAAGAATTTTGa                                                                                                                                                         >  1:367250/1‑239 (MQ=255)                                                                                           ggCCCCCCACCCAAAAGAGAGATATTAGGTTAG‑AATGGGAGGCCGC‑AAGCACGGGTGGCCCCGA‑AAACAGAAGGGAGGAAAGGAAAAGGAAGGAAAAGTCGGGCGGTGCGGA‑AATCCCCACAATCAGGGGGT‑TTAA‑GG‑TGGGGGGAA‑TCAA‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTa                                                                                                                                                     <  1:921844/238‑1 (MQ=255)                                                                                            gCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGGA‑TCAG‑C‑AAG‑CCCGCCC‑CTTTTT‑CCCGCTTTTTCCGTGCGG‑CAGGGAAGTACATCGCTAAAGAAA‑AGCCCCCGG‑GA‑CCAAAGAATTTTTAGTTa                                                                                                                                                     >  2:1318120/1‑238 (MQ=255)                                                                                                  cacaccaAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑AG‑TTTCGGGGA‑TCAG‑C‑GAA‑CCCCCCA‑CTTTTA‑CCCCCTTTTTCCGTGCGG‑CCGTGGAGTAAAACGCCAAAAAAA‑ATCCCACCG‑CC‑CCCAAAATTTTTTAGtttacggtca                                                                                                                                              >  1:1421619/1‑231 (MQ=255)                                                                                                          agagATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGGA‑TCAG‑C‑AAG‑CCCCCCC‑CCTTTA‑CCCGATTTTTCGGTGCGG‑CAGGGAAAGACAACGCTAAAGAAA‑ATCCCACCC‑GA‑CCCAAAAtttttttggttacgcgcaggggcaaa                                                                                                                                      >  1:1557621/1‑218 (MQ=255)                                                                                                            agaTACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTTA‑AG‑GTGCGGGAA‑ACAC‑C‑CAG‑CCCGCCA‑CTTTTA‑CCCCCTTTTTCGGTGCGG‑CCGTGCAGGACAACGCTCAAGAAA‑ACACCACAG‑CG‑CCCAAACTTTTTGTGGTA‑CCG‑T‑GCAGGGC‑caaaa                                                                                                                                 >  1:310832/1‑237 (MQ=255)                                                                                                              aTACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAAGGG‑TGGGGGGAA‑CCGC‑C‑AAC‑CCCCCCC‑CTTTTA‑CCCGTTTTTCCGG‑GCGG‑CCGGGGAGGAAAATGCCTAAAAAA‑AGCCCCCCG‑CACCCAAGGATTTTTTGGTTA‑CCG‑T‑CAAGGGA‑AAAAcc                                                                                                                                >  1:1653528/1‑238 (MQ=255)                                                                                                              aTACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GTAA‑GG‑GTTTGGGGA‑ACAG‑CAAAA‑CCCCCCC‑CTTTTC‑ACCCTTTTTCGGGTGCGG‑‑AGGGGAATACACACCTAAAAAAACTCCCCCCGG‑CC‑CCAAAAATTTTTAGGTTA‑CAG‑G‑GC‑GGGC‑AAAAcca                                                                                                                               >  1:1582724/1‑237 (MQ=255)                                                                                                              aTACAGTACGGCGG‑AAATGGGGCCCCC‑CGGCCCGGGGTTCACCGC‑AAACAGAAACGGTAAAATGAACGGGAGGGTAATTTCCAGCGGTTGGGT‑ACTCCCCCCCAGCAGGGGGG‑TAAG‑GT‑TTGCGGGAA‑TAAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGc                                                                                                                              <  1:1062081/239‑1 (MQ=255)                                                                                                               tACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTTA‑GG‑GTGCGGGAG‑ACAG‑C‑AAA‑CCCCCCA‑CATTTA‑CCCCCTTTTTCGGTGCGG‑CCGTGAAAAACATCGCCAAAGAAA‑ACCCCACGG‑CC‑CCAAAAAATTTTTAGTTA‑ACG‑C‑GCAGGGG‑AAAAACGc                                                                                                                              >  1:1447400/1‑238 (MQ=255)                                                                                                                     aCGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGGA‑TCAG‑C‑AAA‑CCCGCCA‑CTTTTA‑CCCGATTTTTCGGTGCGG‑CAGGGGAGGACATCGCTAAAGAAA‑AGCCCCCGG‑CA‑CCCAAGATTTTTTAGTTA‑CCG‑A‑GCAGGGC‑AAAACCGCCTTCCgg                                                                                                                       >  2:885356/1‑239 (MQ=255)                                                                                                                      cGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGAA‑ATAG‑C‑AAA‑CCCCCCC‑CTTTTT‑ACCCATTTTTCGGTGGGG‑CCGGGAAGTACATCGCTAAAAAAA‑CGCCCACGG‑CA‑CCAAAAAATTTTTTGTTA‑ACG‑T‑GCAGGGG‑CAAAACGCCCTCCcgg                                                                                                                      >  2:795031/1‑239 (MQ=255)                                                                                                                      cGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑ATGTCGGAC‑TTCG‑C‑AAA‑ACCCCCA‑CCTTTA‑TCCCCTTTTCCCGGGCCG‑GCGGGAAGGACCTCTCTAAAACAA‑CTACCCCCG‑CC‑CCCCACATTTTTGAGTTA‑CCT‑TCACAGACC‑AAAACACCCTTCCgg                                                                                                                       >  1:1103265/1‑239 (MQ=255)                                                                                                                        gTCG‑ACATTGGGGCCGC‑CAGCCCGGGGTGTACCGC‑AAACAGAAAGGGGAAAATGAACGGGAAGTAAAATTCGAGCGTTTGGTT‑AATTCCCCCCAGCTGGGCGG‑TTAA‑GG‑TTGCGGAAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGa                                                                                                                     <  2:1192526/238‑1 (MQ=255)                                                                                                                        gTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑AG‑GTTCGGGGA‑ACAG‑C‑AAA‑CCCGCCA‑CTTTTATCCCAATTTTCC‑GTGCGG‑CGGGGAAGTAACTCGCTAAAGAAA‑TGACCACCG‑CC‑CCAAAAAATTTTTAGGTA‑ACC‑G‑GCAGGGC‑AAAAACGCCCTCCgggga                                                                                                                    >  2:823724/1‑237 (MQ=255)                                                                                                                        gTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GTTA‑GG‑GTGCGGGAA‑ACAG‑C‑CAG‑CCCCCCC‑CTTTTA‑CCCCGTTTTCCGGGGCGC‑AGGTGAAAGAAATCGCCAAAAAAA‑AGCCCAAGGACC‑CAAAAAATTTTTAGGTTC‑CTG‑T‑GC‑GGGC‑AAAACCACCATCCgggg                                                                                                                     >  1:269688/1‑237 (MQ=255)                                                                                                                           g‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑ATAA‑AG‑GTTCAGGAA‑ATAG‑C‑AAA‑CCCGCCA‑CCTTTACCCCGGTTTACCGGGGCGG‑‑AGGGGAGTAAAACGCCCAAGAAA‑TTGCCAACG‑CA‑CCAAAAAATTTTTGGTTT‑CCGTT‑CCGGGGA‑AAAACAGCCTTCCGGGacca                                                                                                                  >  1:1666384/1‑239 (MQ=255)                                                                                                                             aCATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGGTTTAA‑GG‑TTGGGGGAA‑‑CAA‑C‑AAGCCCCCCCC‑CTTTTA‑CCCCTTTTTCC‑GTGCGGCCGGGGAAGGAAACCCCCAAAAAAA‑T‑CCCACCG‑CC‑CCCAACAATTTTTAGATACCCC‑T‑GCAGGAA‑AAAACC‑CCCTCCGCGaacaaa                                                                                                                >  1:557922/1‑238 (MQ=255)                                                                                                                               aTTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GTAA‑GG‑GTGAGGGAA‑ACAG‑C‑GAG‑CCCCCCC‑CTTTTT‑CCCCGATTTCCGGTGGGG‑GAGCGGAGTACAAAGCTCAAAAAA‑TTCCCCCCG‑GC‑CCCAAGAGTTTTTAGGTA‑CCC‑A‑GCAGGTG‑AAAAcaccccccagagagcaaagt                                                                                                              >  1:978431/1‑220 (MQ=255)                                                                                                                                      ccgc‑cAGCACGGCGTGTACCGA‑AAACAGCAACGGTGAAAGGAACAGGAAGGAAAATCCCAGCGGTTGGGT‑AATCCCCACCAGAAGGGCGG‑TTAA‑GG‑TGGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAg                                                                                                        <  2:1447400/238‑1 (MQ=255)                                                                                                                                        gc‑cAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGGTTTAA‑GG‑TT‑CGGGAA‑TCAG‑C‑AAA‑CCCGCCC‑CCTTTT‑CCCGCTTTTCCCGGGCCG‑CCGGGGAGTAAATCCCTAAAAAAA‑AGCCCACCG‑CC‑CCCAAGATTTTTTAGTTA‑CCC‑C‑GCAGGGCAAAAACCCCCTCCCGGGAAAAACGttttacccg                                                                                                      >  1:1700777/1‑234 (MQ=255)                                                                                                                                        gc‑cAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑AG‑TTGCGGGAA‑ACAG‑C‑AAA‑CCCCCCC‑CTTTTA‑CCCGATTTTCCCGGGCGG‑CAGTGAAATACATCTCTAAAGAAA‑AACCCACAG‑CC‑CCCAAAATTTTTTAGGTA‑ACG‑T‑GCAGGGG‑AAAACCCCCCTCCCGGAAAAAAGATTTccacg                                                                                                      >  2:540976/1‑234 (MQ=255)                                                                                                                                        gc‑cAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑GTTA‑GG‑TTTCGGGGA‑TCAGCC‑AAC‑CCCCCCC‑CTTTTC‑CCCG‑TTTTTCGGTGCGG‑GCGTGGAGTACAACGCTTAAAAAA‑AACCCCCCG‑CC‑CCCAAGATTTTTTATGTA‑CCG‑C‑GGCGGGC‑AAAAACCCCCTCCCGGGACAAAGATTTCCGccg                                                                                                     >  1:223953/1‑237 (MQ=255)                                                                                                                                               ctggCGGGCACGGC‑AAACGACAACGGTGAAATGAACAGGAAGGAAAATCCGAGCGGTTCGGA‑AATTCCCACCAGTAGGGCGG‑TTAG‑GG‑TTGGGGAAA‑TCAC‑C‑AAG‑TCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCgg                                                                                                <  1:503984/236‑1 (MQ=255)                                                                                                                                               cgggCGTGTACCGC‑AACCAGAAACGGTGAAATAAACAGGAAGGTAAATCCCGGCGGTTGGGT‑AATCCCCCCCAGCATGGCGG‑TTAA‑GG‑TGGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTc                                                                                                  <  2:1330252/234‑1 (MQ=255)                                                                                                                                                   gcgggtcccacaacaagaaaCGGTAAAATGAAAAGGAAGGAAAATCCCGGGGGTTCGGT‑AATCCCCACCAGCATGGCGG‑TTAA‑GG‑TGGGGGAAA‑TCAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGgcgc                                                                                             <  2:223953/220‑1 (MQ=255)                                                                                                                                                   cGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGGA‑ACAG‑C‑AAA‑CCCCCCC‑CTTTTT‑CCCCGTTTTTCGGGGCGG‑CCGGGGAGTAAATCGCTAAAAAAA‑AGCCCCCCG‑CC‑CCAAAAAATTTTTAGTTA‑CCA‑G‑GGCGGGC‑AAAAACCCCCTCCCGGGACAACCATTTCAGGGGCgcggcggc                                                                                            >  1:1559389/1‑236 (MQ=255)                                                                                                                                                   cGTGTACCAC‑AAACAGAAACGGTGAAATGAACAGGAAGGAAAATCCCAGGGGTTCGGT‑AATCCCCCCCAGCAGGGCGG‑TTAA‑GG‑TGGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCt                                                                                            <  2:992510/238‑1 (MQ=255)                                                                                                                                                    tcacccagC‑AAGCACCAACGATGAAATAAACAGAAAGGAAAATCCCCGGGGTTGGGA‑ACTCCCCCCCACAAGGGCGT‑TGAG‑GG‑TTGCGGGAA‑GCAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTc                                                                                           <  1:245784/231‑1 (MQ=255)                                                                                                                                                     taaaagagccagcAGCAAGGGTGAAATGAACAGAAAGGTAAATTCCGGCGGTTCGGT‑AATCCCCCCCAGCAGGGCGG‑TTAA‑GT‑TTGCGGAAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTc                                                                                           <  2:848358/226‑1 (MQ=255)                                                                                                                                                        aCCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGAAAATTCCAGCGGTTCGGT‑AATCCCCCCGAGCATGGGTG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑‑AAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTg                                                                                     <  2:1141075/239‑1 (MQ=255)                                                                                                                                                         ccGC‑AAACAGCAAGGGTAAAAGAAAAGGGAAGGAAAATCCCGGGGTTGCGGT‑AATCCCCACCAGCAGGGGGT‑TTAG‑GG‑TTGCGGAAA‑TCAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTg                                                                                     <  1:885356/239‑1 (MQ=255)                                                                                                                                                         ccGA‑AAACAGCAGGGGAAAAAGGAAAAGGAGGTAAAATCCCAGCGGTTCGGA‑AATTCCCACCAGCAGGGGGG‑TTAA‑GG‑TGGGGGGAA‑CCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTg                                                                                     <  2:376099/239‑1 (MQ=255)                                                                                                                                                          ccgaagacaacaactgaaaaaTGAACTGGAATGAAAATCCCAGCGCTTCGGT‑AGTTCCCCCCAGGTGGGCTG‑CTAG‑TG‑GTGGGGAAA‑TCAG‑C‑AAT‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CT‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTg                                                                                     <  1:64970/221‑1 (MQ=255)                                                                                                                                                          cGC‑AAACAGCAACGGGGAAATGAACAGGAAGGTAAATCCCAGGGGTTCGGA‑AATTCCCCCCAGCAGGGCGG‑TTAA‑GT‑TTGGGGAAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑Ca                                                                                                                                                                                                           <  2:260623/127‑1 (MQ=255)                                                                                                                                                            gaaaaCAGCAACGGTGAAATGAAAAGGAAGGTAAATCCCAGCGGTTCGGT‑ACTCCCCCCCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGaa                                                                                   <  2:1584884/237‑1 (MQ=255)                                                                                                                                                                  aGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCC‑CTTTTA‑CCCGCTTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑AGCCCACGG‑CA‑CCCAAGAtttttta                                                                                                                                                         >  2:167255/1‑165 (MQ=255)                                                                                                                                                                    cAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCCATTTTTCGGTGCGG‑CAGTGAAGTAAATCGCCAAAGAAA‑AACCCACCG‑CA‑CCCAACATTTTTTAGTTA‑CCG‑T‑GCAGGGC‑AAAACCCCCCTCCGGGAACAACGATTTTAGCCGCTCGGCGCCCaaaacacaatccttc                                                                            >  1:1174008/1‑226 (MQ=255)                                                                                                                                                                    cAACGGTAAAAGAAACAGGAAGTAAAATCCCAGCGGTTGGGT‑AATTCCCACCAGCAGGGCGG‑TTAA‑GG‑TGGGGGAAA‑TAAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCa                                                                           <  2:1174008/239‑1 (MQ=255)                                                                                                                                                                          tGAAAAGAAAGGGAAGGTAAATTCCGGCGGTTCGGT‑AATTCCCACCGGCAGGGCGG‑TTAA‑GG‑TGGCGGGAA‑ACAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAG‑TA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct                                                                     <  2:704548/238‑1 (MQ=255)                                                                                                                                                                           gaaataagaaGGAAGTTAAATTCCAGCGGTGCGTT‑AATCCCCACCAGCATGGCGG‑TTAA‑GG‑TGGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct                                                                     <  2:860232/229‑1 (MQ=255)                                                                                                                                                                           gaaagaaaCGGGAATATATATTCCTGGGCTGCGGT‑AATTCCGACCAGCATGGCGT‑TAAA‑GG‑GGGGGGGAA‑ACAG‑C‑AGC‑GCCGCCA‑CTTTTA‑CCCGATTGACCGGTGCGG‑CATTGAAGTACATCGCTAGAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATGTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct                                                                     <  1:1376694/232‑1 (MQ=255)                                                                                                                                                                           gaaaaaaaCAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGAATGGCGG‑TTAA‑GG‑TTGGGGAAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct                                                                     <  2:427958/232‑1 (MQ=255)                                                                                                                                                                           aaaaggaaaaggaAGGTAACTCCCAGGGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TAAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct                                                                     <  2:557922/237‑1 (MQ=255)                                                                                                                                                                           aaaaTGAACAGGAAGGTAAATCCCAGCGGTGCGGT‑AATTCCCCCCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct                                                                     <  2:1559389/237‑1 (MQ=255)                                                                                                                                                                            aaaTGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGGA‑ACAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCCGTTTTCCGGTGGGG‑CAGGGAAGGAAATCGCTAAAGAAA‑AGCCCCCGG‑CC‑CCAAAGATTTTTTAGTTA‑CCG‑T‑GCAGGGG‑CAAACCGCCTTCCGGGGACAACCATTTCTGCGGCTCCGCGGCCACACTGCActcccctttctttta                                                                    >  1:848358/1‑226 (MQ=255)                                                                                                                                                                            aaaTGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGAA‑TCAG‑C‑AAA‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGGACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTTAGTTA‑ACG‑T‑TCAGGGC‑AAAAACGCCTTCCGGGGACAACGATTTCAGCGGCCCGGGGCTCAAACTGAACCCtttgcgaagctt                                                                    >  2:1005672/1‑228 (MQ=255)                                                                                                                                                                             aaaaaaaagaaaGGTAATGTCAGGCGGTGCGTT‑AATCCCCACCAGTATGGGGT‑TTAG‑GG‑TGGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTgcg                                                                  <  1:1005672/229‑1 (MQ=255)                                                                                                                                                                             aaTAAAGAGGAGGATATATTCCGGCGGTTGGTT‑ACTCCCCACCACTTTGGCGG‑TAAA‑GG‑GTGCGGGAA‑CCAC‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTgcg                                                                  <  1:1107280/239‑1 (MQ=255)                                                                                                                                                                               tGAACAGGAAGGAAAATCCCGGGGGTTGGGA‑AATCCCCACCAGCATGGCGG‑TTAG‑GG‑TTGCGGAAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc                                                                <  2:1582724/239‑1 (MQ=255)                                                                                                                                                                                 acaaggaaggaAAGTCCCGGTGGTGCGGT‑AATCCCCCCCAGCAGGGGGG‑TTAA‑GG‑TTGCGGAAA‑CCAG‑C‑AAC‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc                                                                <  1:154066/234‑1 (MQ=255)                                                                                                                                                                                 aagaggaaggaAAATTCCGGGGGTGCGGT‑AATCCCCACCAGCA‑GGGGG‑TTAAGGG‑TGGGGGGAA‑ACAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc                                                                <  1:1540977/234‑1 (MQ=255)                                                                                                                                                                                  aCAGGAAGTTAAATTCCAGCGGTTCGGT‑AATCCCCACCAGCGGGGCGG‑TTAA‑GG‑TGGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAg                                                             <  2:363399/239‑1 (MQ=255)                                                                                                                                                                                                cccAGCGGTTCGGT‑AATCCCCACCAGCATGGCGG‑TTAA‑GG‑TGGCGGGAA‑CCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑Ca                                                                                                                                                                                                           <  2:80950/89‑1 (MQ=255)                                                                                                                                                                                                    gCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCC‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGGACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTTAGTTA‑CCG‑T‑GCAGGGC‑AAAACCCCCCTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACCGAACTCCTTCCGAAGCTGCGCCCCGTAcctgtctcttttaccc                                           >  2:1240723/1‑224 (MQ=255)                                                                                                                                                                                                          ccgtcacatccacaccgCAGGGCGT‑TTAA‑‑G‑TGGGGGGAACTCGG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAAc                                      <  1:425158/223‑1 (MQ=255)                                                                                                                                                                                                                 ttCCCCCCAGCAGGGCGT‑TTAA‑GG‑TTGGGGAAA‑CCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGc                                                                                                                              <  2:1047455/144‑1 (MQ=255)                                                                                                                                                                                                                     ccccaGCATGGCTG‑TTAG‑GT‑TTGGGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc                           <  2:557911/237‑1 (MQ=255)                                                                                                                                                                                                                        ccatcttgggttgtAA‑GG‑TGGCGGTAA‑ACAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCa                         <  1:795031/226‑1 (MQ=255)                                                                                                                                                                                                                         aGCGTGTCGG‑TTAT‑GG‑TGGGGGAAA‑TCAG‑C‑AAT‑CCCGCCA‑CTTTTA‑CCCGATTTTACGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGATTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCaaa                       <  2:1418366/239‑1 (MQ=255)                                                                                                                                                                                                                           cATGGCGG‑TTAA‑GG‑TTGCGGGGA‑TCAG‑C‑AAG‑CCCGCCC‑CTTTTA‑CCCGATTTTTCGGGGCGG‑CAGGGAAGGACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTT‑CCG‑T‑GCAGGGC‑AAAACCCCCCTCCGGGAACAACGATTTCAACGGCTCGGCGCGCCAACAGAACTCTTGCAGATGCTGCGGCCAGTACATCTTAATGCCGCCTTCAACAGCTGTCCGGCCACAGa                     >  1:555348/1‑239 (MQ=255)                                                                                                                                                                                                                           cATGGCGG‑TTAA‑GG‑GTGCGGGAA‑TCAG‑C‑AAG‑CCCCCCA‑CCTTTA‑CCCGATTTTCCGGTGCGG‑CAGGGAAGTACATCGCTAAAGAAA‑TTCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGGACAACGATTTCAGCGGCTCGGCGCCCAAACTGCACTCTTTCAGATGCTGCGGCCCGGACATCTCAATGCCCCCCTCAACaaccgtcgggcccaaca                     >  1:1477959/1‑223 (MQ=255)                                                                                                                                                                                                                               ccGG‑TTAA‑GG‑TTGGGGAAA‑CCAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGAt                    <  2:1557621/235‑1 (MQ=255)                                                                                                                                                                                                                                cGG‑TTAG‑GT‑TTGCGGAAA‑CAGG‑C‑AAG‑CCCGCCA‑CTTTTC‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATaaa                 <  2:1566291/238‑1 (MQ=255)                                                                                                                                                                                                                                cGG‑TTAA‑GG‑TTGCGGAAA‑TCAC‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTGCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATaaa                 <  2:1666384/238‑1 (MQ=255)                                                                                                                                                                                                                                  ggtttgggg‑TGGCGGAAA‑CCAC‑C‑ACG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATaaa                 <  1:1314174/231‑1 (MQ=255)                                                                                                                                                                                                                                      gaggg‑TTGCGGAAA‑ACAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTc            <  1:964818/236‑1 (MQ=255)                                                                                                                                                                                                                                            ttGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGCCCAAAGATAAACTGTCCGGAg       >  1:1319105/1‑239 (MQ=255)                                                                                                                                                                                                                                             ggCGGGAA‑GCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGa      <  2:580041/238‑1 (MQ=255)                                                                                                                                                                                                                                                gggAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGa   >  1:368643/1‑239 (MQ=255)                                                                                                                                                                                                                                                  gAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGaa  <  2:840986/238‑1 (MQ=255)                                                                                                                                                                                                                                                  gAA‑TCAG‑A‑ACG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGaa  <  2:310832/238‑1 (MQ=255)                                                                                                                                                                                                                                                      tCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtg                                                                       >  1:589813/1‑166 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                        ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAAC‑CTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGC‑CAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGT‑AATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAA‑TCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAA  >  NC_000913/3862434‑3862903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑