| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 599,579 | T→G | 26.8% | V289G (GTG→GGG) | cusA → | copper/silver efflux system, membrane component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 599,579 | 0 | T | G | 26.8% | 248.9 / 14.4 | 123 | V289G (GTG→GGG) | cusA | copper/silver efflux system, membrane component |
| Reads supporting (aligned to +/- strand): ref base T (12/69); new base G (38/2); total (52/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.78e-18 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 126 total aligned reads displayed.
TGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGT > NC_000913/599342‑599807 | tGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGgtggtg < 2:786954/239‑1 (MQ=255) aaaCCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑t < 2:735787/239‑1 (MQ=255) aaaCCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑t < 2:875558/239‑1 (MQ=255) ggcggTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACg < 1:1572952/238‑1 (MQ=255) aCTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGTGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATcgccg < 2:1578768/239‑1 (MQ=255) gcggaaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGCGCCTTCGA‑T‑GCGGCCAAAAACCCCCggcaggggtgggcgcgcgggcggg > 1:130432/1‑216 (MQ=255) ggaaTATATGGGGCGCGCAAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAAGGGGGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑c < 1:1046547/238‑1 (MQ=255) aaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGC‑T‑TCGG‑CAAAAACGCCCCGGA‑AGGGGTCGCCG‑CCGTGAA‑GGG‑Caa > 1:1512533/1‑238 (MQ=255) aaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGGCCTCGGA‑G‑CCGG‑CAAAAACGCCCCAGA‑AGGGAGCTCGG‑CCGTGCA‑gggaca > 1:1703202/1‑234 (MQ=255) tatatGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATcgccg < 2:1728691/223‑1 (MQ=255) tatatGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑Caa < 2:1218616/236‑1 (MQ=255) tGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGTCTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGaa < 2:873753/239‑1 (MQ=255) ggTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGaaa < 2:141735/239‑1 (MQ=255) ggTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGGGGTCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGG‑GAAA‑CTGGaaa > 2:1424549/1‑239 (MQ=255) ggTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATACTGGGG‑G‑CCGG‑GCAAAACGCCCGAGA‑AGGGATCGCCG‑CCGGGAG‑GGG‑GAAA‑Ctcggaa > 2:502621/1‑234 (MQ=255) gTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGaaa < 2:811005/238‑1 (MQ=255) gTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACCGCGAAGGCGAAGTGGCGCGGGGGGGGCGTG‑TCCCGCGACT‑CCCG‑CAAAAAC‑CCCGCGACAGGGGACCCCG‑CCGTGCA‑GGA‑CAAA‑cccgaac > 1:873753/1‑233 (MQ=255) tGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGAGCCTGCGG‑T‑CCGG‑CAAAAACGCCCCACG‑AGGGATCGCCC‑GCGAGAC‑GGA‑CAAA‑CTGGAAACg > 2:1076964/1‑239 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTTATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGGTTCCGCGA‑T‑CCCG‑CCAAAAAACCCGGGG‑AGGAGGTGCCC‑GCGTGAA‑GGG‑CAAA‑CAGGGAACg > 1:732149/1‑238 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGTGGACCTGCGA‑A‑CCGG‑GAAAAAAGACCGCGA‑AGGGGTAGCCG‑CCGGGaggtgacacaaggcaacac > 1:1636797/1‑221 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGCGA‑AGTGATCGCCG‑CCGTGGA‑GGG‑CAAA‑CTGGGAACg > 2:31164/1‑238 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGG‑AGTGATCGCCG‑CCGCGAA‑GGC‑CAAA‑ATGGAAAc > 2:206837/1‑237 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGTTCCAGCGC‑TCCCGG‑CAAAACCGCCCG‑GA‑AGGGAGCgccg‑cccggacagagaaccccgaaaac > 1:1321559/1‑217 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGG‑T‑TCGG‑CCAAAAACCCCGCGA‑AGGGGACGCCG‑CCGGGGA‑GGG‑CAAA‑CTGGAAAc > 2:1062310/1‑237 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGG‑AGGGATCGCCG‑CCGGGGA‑GGA‑AAAA‑CCGGAGACg > 2:461873/1‑238 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGG‑T‑CCGG‑CGAAAACACCCGGGA‑AGGGGTCGCCG‑CCGTGGC‑GGA‑GAAA‑CCGGaaga > 1:233284/1‑235 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGGGATCGCCG‑CCGCGAA‑GGG‑GAAA‑CTGGAAACg > 2:683163/1‑238 (MQ=255) cgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGGGTTCCTGCGG‑T‑CCGG‑CGAAAACGCCCGCGA‑AGAGGTAGCCG‑CCCGGGA‑AGA‑CAAA‑ATGGGAAc > 2:941944/1‑236 (MQ=255) cgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGA‑T‑CCGG‑CAAAAACCCCCGGGG‑AGGGATCGCCG‑CCGGGGA‑GGG‑CAAA‑CTGGGAACGcc > 1:695131/1‑238 (MQ=255) gcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGTGATCCTGCCG‑T‑TCGG‑CGACAACGACCCAGC‑AGTGAGCGCCG‑CCGTgcgaggcgaactcgaacacatc > 1:1343314/1‑218 (MQ=255) gcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTTCGA‑T‑CCGG‑CAAAAACGCCCCAGA‑AGTGATCGCCG‑CCGGGAAGGGA‑CAAA‑‑TGGAAACGCTg > 2:1600093/1‑239 (MQ=255) gcCAGCGGCTATCTGCAAACGCTCGGCGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGaa < 2:362212/239‑1 (MQ=255) cGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGAGCCTGCGG‑T‑CCCG‑GAAAAAAACCCGCGG‑AGTGAGCGCGC‑CCGGGAA‑GGA‑CAAA‑AAGGAAACACTGaaaaaga > 1:1475469/1‑236 (MQ=255) ttATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCAAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAagtagt < 2:578597/237‑1 (MQ=255) aaaCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGa < 2:215609/238‑1 (MQ=255) aCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGTGATCCTGCGC‑T‑CCGG‑CCAAAACCCCCGCGG‑AGTGATCGCCG‑CCCGGGA‑GGA‑CAAA‑CTGGCAACGCTGGAAAGTAGTCT‑GCCGGCAgg > 2:1230559/1‑239 (MQ=255) cTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGG‑T‑CCGG‑GAAAAACACCCCAGA‑AGGGGTCGCCG‑CCGGCGA‑GGA‑CAAA‑ACGGAAACACCGAAAAAGAGTCC‑GCCGGGAGGCgg > 1:1714359/1‑238 (MQ=255) tCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGGTGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTg < 2:570217/239‑1 (MQ=255) tCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCt < 2:760174/226‑1 (MQ=255) tCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTg < 2:452522/239‑1 (MQ=255) ccgtcgacTTTAATCACACCGTTTTAAAAGCCAGTGAAAAGGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGCCCAGATTGGCCCGGAGAGGCGCCGGGTCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTg < 1:182625/235‑1 (MQ=255) gacgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGga < 2:812000/239‑1 (MQ=255) cgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGgag < 1:1037809/238‑1 (MQ=255) cgacTTTAAGCACATAGTTTTAAAAGGCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATTGTGCGAAGGTCCAGAGTGGCCCGGAGAGGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGGGAAGGGGCG‑GGGGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTGT‑GCCGGAAGGCGTGgaga < 1:1646678/239‑1 (MQ=255) tttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGt < 2:899314/239‑1 (MQ=255) tttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGGCCAGATTGGCCCGGGGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGAGGTTCCTCGA‑T‑CCCG‑GAGCAATCCACCCGA‑AGTGGTCGCCG‑CCGGGCA‑GGG‑CAAC‑CAGGAAACCCGGAAAAAGAGTcaggccgcaaggggggggaatg > 1:511218/1‑217 (MQ=255) tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGGTCCCGCGG‑A‑CCCG‑GAAAAACGCCCGGGG‑AGGGGTCGGCG‑CCCGGGA‑GGG‑CAAACCTGGAAACGC‑GAAAAGAAGGCTGGCCGGAgggggcggtccctatt > 1:760174/1‑226 (MQ=255) tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTa < 2:143782/239‑1 (MQ=255) tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTa < 2:1508260/239‑1 (MQ=255) tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTa < 2:625740/239‑1 (MQ=255) tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTa < 2:695131/239‑1 (MQ=255) tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTa < 1:1269587/239‑1 (MQ=255) tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGGGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACGAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTa < 1:916735/239‑1 (MQ=255) tAATCACAGCGTTTTAAAAGCCAGGGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCGGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACGAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTa < 2:664540/239‑1 (MQ=255) aaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcag < 2:40267/239‑1 (MQ=255) aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcagcc < 2:94481/239‑1 (MQ=255) aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcagcc < 2:992869/239‑1 (MQ=255) aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcagcc < 2:1475469/239‑1 (MQ=255) aGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGGTCCTGCGA‑T‑CCGG‑CAAAAAAGCCCGAGA‑AGGGATCGCCG‑CCGCGGA‑GGG‑CAAA‑ATGGGAACGCAGAAAAAGAGTCT‑GCCGGAAGGCGGGGGGATAGTTC‑AAAC‑ATACGATCGcagccagc > 1:615447/1‑238 (MQ=255) gggCTTGCCCGTTTATCGGGGCGAAGTTGCGAAGGGCCAGATTGGCCCGGAGATGCGCCGGGGGATTGCGAAACAAAACGGCGAAGGCGAAGGGGCT‑GGGGGGGTGGTGATCCTGCGA‑A‑TCGT‑CAAAAACGGCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGG‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGTCAGCTCATGGAcc < 1:1415931/238‑1 (MQ=255) gTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGAGGTCCTGCGC‑T‑ACGG‑CAAAAACGCACGAGG‑AGTGGACGCCG‑CCGTGCA‑GGA‑CCAA‑CTTGAAACGCCGCAAAGGAGTCT‑TCCGCACGGCGGGGAGAGAGTTA‑CAAA‑AAAAGACCGcagccccctccactaccgcg > 1:1346218/1‑223 (MQ=255) gTGCCCGTTTATCTGCGCGATGTTGCGAAGGCCCAGATTGGCGCGGAGATGCGCCGGGGCAGTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGGGATCTTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCgcgc < 1:1694691/239‑1 (MQ=255) gCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCa < 1:149602/239‑1 (MQ=255) gTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAagtagt < 2:880864/174‑1 (MQ=255) gTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATa < 2:689594/206‑1 (MQ=255) ttATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGAc < 2:187941/238‑1 (MQ=255) tGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACcgcg < 2:1059170/218‑1 (MQ=255) gTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCaa < 2:1544463/239‑1 (MQ=255) gAAGGGCGAGATGGGCCCGGAGATGCGTCGGGGCATTGCCGAACTAAACGGCGAAGGCGAGGTGGCG‑GGCGGGGTGGTGATCCGGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGc < 2:1217975/239‑1 (MQ=255) gTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGc < 2:1680110/228‑1 (MQ=255) gTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGGGATCCTGCGG‑T‑CCCG‑CAAAAACGCCCGCGA‑AGGGATCGCCG‑CCGTGAA‑GGG‑GAAA‑CTGGAAACGCGGGAAAGAAGTCT‑GCCGGAAGGGGGGGAGAGAGTTA‑CAAC‑AAAAGATCGCAGCCCGCTCATATACCGCGCCCCCGACCACCCCACCGGCAAGCTTCTggg > 1:1154965/1‑238 (MQ=255) gTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGA‑T‑CCGG‑CAAAAACGCCCGCGA‑AGGGATCGCCG‑CCGGGAA‑GGA‑CAAA‑ATGGAAACGCTGAAAAGAAGGTT‑GCCGGGAGGGGGGGAGATAGTTA‑AAAC‑ATACGGACGCCGCCAGCTCATTTACCGCGCCCTGCACAACCTCAGCGGCAAGTTGCTggg > 1:1717121/1‑238 (MQ=255) gTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGA‑T‑CCGG‑CCAAAACCCCCCGGA‑AGTGGTCGCCG‑CCCTGAA‑GGG‑CACA‑CCGGAAACGCTGCAAAGTAGTCT‑GCCCGGAGGCGTGGGGATAGTTA‑CAAC‑ACACCATCGCACCCCCCTCCTTGTCCGCGCCCTCGCCAAcccgccccttttaccccccc > 1:1059170/1‑220 (MQ=255) tCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa < 1:675234/238‑1 (MQ=255) tCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCA‑CCGTAAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa < 2:1295728/238‑1 (MQ=255) gccAGATTGGCCCGGAGAGGCGCCGGGGCATTGCCGAACTAAACGGGGAAGCCGAAGTGGCG‑GGCGGGGTGGTGACCCTGCAA‑T‑CCGG‑CAAAAAGGCCCGGGA‑ATTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa < 1:1286343/237‑1 (MQ=255) ccAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGC‑T‑CCGG‑CCAAAAAGCCCGAGA‑AGGGATCGCCG‑CCGTGGA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGGAGTCT‑GCCGGAAGGCGGGGGGATAATTACCAAC‑A‑ACGAACGCAGCCAACTCCTTCGCCCCGACATCGCCAACCTCCACCGCAAgcagccgggag > 1:1544536/1‑229 (MQ=255) gATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGTGGTCCCGCGG‑T‑CCGG‑CCAAAACGCCCCGGG‑AGGGATCGCCGCCCGTG‑C‑GGG‑CAAA‑CCGGAAACGCCGGAAAGGAGTCT‑TCCGGCAGGGCGGGGGATAAGTA‑CAACAATAC‑ATCGCCGCCAACCCACTTGCCGCCCCATCCGCCCCCCCCCCGGCAAGTTGCttggcggca > 1:204533/1‑231 (MQ=255) tGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGGGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTa < 2:621037/239‑1 (MQ=255) gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGTGGTCCTGCGG‑T‑CCGG‑CAAAAACCCCCGAGA‑AGGGATCGCCG‑CCCGGGA‑GGG‑CAAA‑CTGGGAACGCCGAAAAGAAGTCT‑GCCGGCAGGCGTGGGGAGAGGTA‑CAAC‑ATACGATACCCGCCCGCCCATTGACCGCGCCCTCCGCAACCCCACCGGCCACGTGCTGGGAGAGGTTAtt > 1:531844/1‑239 (MQ=255) gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGA‑T‑CCGG‑CCAAAACGCCCGAGA‑AGGGAGCGCCG‑CCGTGAA‑GGA‑CAAA‑CCCGAAACGCCGAAAAGAAGTCT‑GCCGGAAGGCGCGGAGAAAGGTT‑AAAC‑AAACGAACGCAACCAGCTCATTGACCGGGCCCTCGGCACACCCACCGGCAAGCTGCTGGGAGAGattatt > 1:289377/1‑239 (MQ=255) cccGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGGGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATtg > 2:1502937/1‑239 (MQ=255) ggAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTgtgg < 2:822808/239‑1 (MQ=255) gagaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGGGG‑T‑CCGG‑CAAAAACGCACCAGA‑AATGATCGCCG‑CCGTGAA‑GGACCAAA‑CTGGAAACG‑GGAAAAGTAGTCC‑GCCGGGAAGAGGAGAGACAGGTA‑CAAC‑AAAAGGTCGCAGCACGCCCCGAGACCGGACCCTCGACAACCCCAGCGGCACGTTGACGGTGGAGGTTATTgtggc > 1:919361/1‑238 (MQ=255) gagaTGCGCCGGGGAATTGCGCAACTAAACGGAGAGGGAGAGGTGGCG‑GGGGGGGTGGGGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTgtgg < 1:384980/238‑1 (MQ=255) aTTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCtgtg < 2:1512411/238‑1 (MQ=255) cGAACTAAACGGCGAAGGCGAAGTGGGG‑GGCGGGGTGGTGAGCCGGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTg < 1:821037/238‑1 (MQ=255) cGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTg < 1:412437/238‑1 (MQ=255) aaCTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGGGGTCGCCG‑CCGGGGA‑GGG‑CAAA‑CTGGAAAAGCTGAAAAGGAGTCT‑GCCGGAAGGCGGGGAGATAATTA‑CAAA‑ATACGAACGCAGCCAGCTCCTTTACCGCGCCCTCGACAACCCCAGCGGCAAGTTGGTGGGAGAGtttttt > 1:900567/1‑212 (MQ=255) aaCTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGA‑A‑CCGG‑CAAAAAACCCCGGGG‑AGGGGGCGGCC‑CCGGGAA‑GGG‑CAAA‑CCGGAAACCCGGGAAAGAAGTCT‑GGCGGAAGGCGGGGAGGAAGGTA‑CAAC‑AAACGAAGCCCGCCAGCCCATTTGACGCGCCATCCACACCCCCACGGGCAAGCTGCTGGCAGAGTTTATTGGTGGGGCGGGAGCCTGGGGGCGGttt > 1:359736/1‑239 (MQ=255) cTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa < 2:744532/200‑1 (MQ=255) aCGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTgg < 2:1714359/239‑1 (MQ=255) cGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGGGGTCCTGCGA‑T‑CCGG‑CAAAAACGGCCGCGA‑AGTGATCGCCG‑CCGGGGA‑GGA‑CAAA‑CTGGAAACGCTGAAAAATAGTCT‑GCCGGAAGGCGGGGGGATAGTTA‑CAAA‑ATACGATCGCAGCCCGCTCCTTGACCGCGCCATCGCCAACCTCAGCGGCAAGTTTCTGGGAGGGTTTTTTGGGGTGGCGGGGGTCTGTgcgcgggtttttttgg > 1:1389539/1‑227 (MQ=255) cgaaggcgaagTGGCG‑GGCGGGGGGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGGGA‑AGGGATCGCCG‑CCGTGAA‑GGA‑CAAA‑ATGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGGGAAAGTTA‑AAAA‑AAAAGATCGCAGCCAGCTCATTGACCGCGCCATCCACAAACTCCCCGGCCAGTTGCTGGGAGAGTTTTTTGTGGGGGGGGGGGTCTGGGCGGTGTTTTTCTGGcggg > 1:798649/1‑236 (MQ=255) gaaggcgaagGGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCAtgt < 2:741280/239‑1 (MQ=255) aggcgaagTGGCG‑GGCGGGGTGGTGACCCTGCGG‑T‑CCGT‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCAtgtg < 1:941944/238‑1 (MQ=255) aggcgaagTGGCG‑GGCGGGGGGGTGATCCTGCGA‑A‑CCGG‑CAAAAACGCCCGCGG‑AGTGATCGCCG‑CCGGGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGGAGGGGCGGGGATAATTT‑CAAC‑ATACGAACGCAGCCAGCTCATTGACCCCGCCATCGACAAACCCAGCGGCCAGTTGCTGGAGGAGGTTTTTGTGGTGGGGGGCGGCTGTGCGCCGGTTCTCTGGcgcgtgg > 1:389546/1‑233 (MQ=255) gaagTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCt < 2:240322/238‑1 (MQ=255) gcgggGTGGTGAGCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑GGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCtggt < 1:266514/238‑1 (MQ=255) ggtggtGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATtgtg > 1:1498747/1‑184 (MQ=255) | TGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑T‑CCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CCGTGAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGT > NC_000913/599342‑599807 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |