| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 599,589 | A→G | 12.5% | R292R (CGA→CGG) | cusA → | copper/silver efflux system, membrane component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 599,589 | 0 | A | G | 12.5% | 340.9 / 2.1 | 134 | R292R (CGA→CGG) | cusA | copper/silver efflux system, membrane component |
| Reads supporting (aligned to +/- strand): ref base A (33/75); new base G (19/2); total (57/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.17e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 135 total aligned reads displayed.
AAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCC > NC_000913/599352‑599825 | gggcggTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑Caaaaa < 2:1188558/237‑1 (MQ=255) ccTGGAGGAAGCGGAATATAGGGTGCGCGCCAGCGGCTAGCTGCAAACGGTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATcgccg < 1:1328479/238‑1 (MQ=255) ggaagcggaaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑g < 1:1677846/238‑1 (MQ=255) gcggaaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGCGCCTTCGA‑TGCGGCCAAAAACCCCCggcaggggtgggcgcgcgggcggg > 1:130432/1‑216 (MQ=255) ggaaTATATGGGGCGCGCAAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAAGGGGGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑c < 1:1046547/238‑1 (MQ=255) aaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGC‑TTCGG‑CAAAAACGCCCCGGA‑AGGGGTCGCCG‑CC‑GT‑GAA‑GGG‑Caa > 1:1512533/1‑238 (MQ=255) aaTATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGGCCTCGGA‑GCCGG‑CAAAAACGCCCCAGA‑AGGGAGCTCGG‑CC‑GT‑GCA‑gggaca > 1:1703202/1‑234 (MQ=255) tatatGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATcgccg < 2:1728691/223‑1 (MQ=255) tatatGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑Caa < 2:1218616/236‑1 (MQ=255) tGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGTCTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGaa < 2:873753/239‑1 (MQ=255) ggTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGaaa < 2:141735/239‑1 (MQ=255) ggTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGGGGTCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGG‑GAAA‑CTGGaaa > 2:1424549/1‑239 (MQ=255) ggTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATACTGGGG‑GCCGG‑GCAAAACGCCCGAGA‑AGGGATCGCCG‑CC‑GG‑GAG‑GGG‑GAAA‑Ctcggaa > 2:502621/1‑234 (MQ=255) gTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGaaa < 2:811005/238‑1 (MQ=255) gTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACCGCGAAGGCGAAGTGGCGCGGGGGGGGCGTG‑TCCCGCGACTCCCG‑CAAAAAC‑CCCGCGACAGGGGACCCCG‑CC‑GT‑GCA‑GGA‑CAAA‑cccgaac > 1:873753/1‑233 (MQ=255) tGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGAGCCTGCGG‑TCCGG‑CAAAAACGCCCCACG‑AGGGATCGCCC‑GC‑GA‑GAC‑GGA‑CAAA‑CTGGAAACg > 2:1076964/1‑239 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTTATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGGTTCCGCGA‑TCCCG‑CCAAAAAACCCGGGG‑AGGAGGTGCCC‑GC‑GT‑GAA‑GGG‑CAAA‑CAGGGAACg > 1:732149/1‑238 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGTGGACCTGCGA‑ACCGG‑GAAAAAAGACCGCGA‑AGGGGTAGCCG‑CC‑GG‑Gaggtgacacaaggcaacac > 1:1636797/1‑221 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑GGCGGTTGCCG‑CC‑GTGGAG‑GGA‑CAAA‑CGGGaaca > 1:94481/1‑236 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGG‑TTCGG‑CCAAAAACCCCGCGA‑AGGGGACGCCG‑CC‑GG‑GGA‑GGG‑CAAA‑CTGGAAAc > 2:1062310/1‑237 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGA‑TCCGG‑CAAAAACGCCCGAGG‑AGGGATCGCCG‑CC‑GG‑GGA‑GGA‑AAAA‑CCGGAGACg > 2:461873/1‑238 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGG‑TCCGG‑CGAAAACACCCGGGA‑AGGGGTCGCCG‑CC‑GT‑GGC‑GGA‑GAAA‑CCGGaaga > 1:233284/1‑235 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGGGATCGCCG‑CC‑GC‑GAA‑GGG‑GAAA‑CTGGAAACg > 2:683163/1‑238 (MQ=255) cgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGA‑TCCGG‑CAAAAACCCCCGGGG‑AGGGATCGCCG‑CC‑GG‑GGA‑GGG‑CAAA‑CTGGGAACGcc > 1:695131/1‑238 (MQ=255) cgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTACTGCGG‑TTCGG‑CAAAAACGCCCGAGAGAGGGAT‑GCCG‑CCGGT‑GAG‑GGC‑Caaatgggcaagcg > 1:387337/1‑229 (MQ=255) gcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGATCCCGCGA‑TCCGG‑GAAAAACGCCCGGGG‑AGGGATACCCC‑CC‑GT‑GGA‑GGG‑CAAA‑ACGGGAAAGCTg > 2:700092/1‑239 (MQ=255) gcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGTGATCCTGCCG‑TTCGG‑CGACAACGACCCAGC‑AGTGAGCGCCG‑CC‑GT‑gcgaggcgaactcgaacacatc > 1:1343314/1‑218 (MQ=255) gcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTTCGA‑TCCGG‑CAAAAACGCCCCAGA‑AGTGATCGCCG‑CC‑GG‑GAAGGGA‑CAAA‑‑TGGAAACGCTg > 2:1600093/1‑239 (MQ=255) gcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGG‑TCCGG‑CAAAAAAGCCCCAGA‑AGGGATCgccc‑ccccgcggggcccggttcttttaaa > 1:1728691/1‑215 (MQ=255) gcCAGCGGCTATCTGCAAACGCTCGGCGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGaa < 2:362212/239‑1 (MQ=255) cGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGAGCCTGCGG‑TCCCG‑GAAAAAAACCCGCGG‑AGTGAGCGCGC‑CC‑GG‑GAA‑GGA‑CAAA‑AAGGAAACACTGaaaaaga > 1:1475469/1‑236 (MQ=255) ttATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCAAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAagtagt < 2:578597/237‑1 (MQ=255) aaaCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGa < 2:215609/238‑1 (MQ=255) aCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGTGATCCTGCGC‑TCCGG‑CCAAAACCCCCGCGG‑AGTGATCGCCG‑CC‑CG‑GGA‑GGA‑CAAA‑CTGGCAACGCTGGAAAGTAGTCT‑GCCGGCAgg > 2:1230559/1‑239 (MQ=255) tCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTg < 2:629453/239‑1 (MQ=255) ccgtcgacTTTAATCACACCGTTTTAAAAGCCAGTGAAAAGGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGCCCAGATTGGCCCGGAGAGGCGCCGGGTCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTg < 1:182625/235‑1 (MQ=255) cgacgaCTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGG‑TCCGG‑CAAAAACGCCCGAGA‑AGGGAGCGCCG‑CC‑GT‑GGA‑GGA‑CAAA‑ATGGAAAAGCTGCAAAGTAGTCT‑GCCGGAAAGGGTgg > 2:770347/1‑239 (MQ=255) cgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGgag < 1:1037809/238‑1 (MQ=255) cgacTTTAAGCACATAGTTTTAAAAGGCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATTGTGCGAAGGTCCAGAGTGGCCCGGAGAGGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGGGAAGGGGCG‑GGGGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTGT‑GCCGGAAGGCGTGgaga < 1:1646678/239‑1 (MQ=255) tttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGt < 2:899314/239‑1 (MQ=255) tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGGTCCCGCGG‑ACCCG‑GAAAAACGCCCGGGG‑AGGGGTCGGCG‑CC‑CG‑GGA‑GGG‑CAAACCTGGAAACGC‑GAAAAGAAGGCTGGCCGGAgggggcggtccctatt > 1:760174/1‑226 (MQ=255) tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTa < 2:143782/239‑1 (MQ=255) tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTa < 2:1558156/239‑1 (MQ=255) tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTa < 2:695131/239‑1 (MQ=255) tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTa < 1:1269587/239‑1 (MQ=255) tAATCACAGCGTTTTAAAAGCCAGGGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCGGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACGAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTa < 2:664540/239‑1 (MQ=255) aTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGG‑TCCGG‑CAAAAAAGCCCGAGG‑AGGGATCGCCG‑CC‑GG‑GAA‑GGA‑CCAA‑CTGGGAAAGCTGGAAAGGAGGCC‑GCCGGAAGGCGTGGGGGTAGGTA‑ACAC‑At > 2:412437/1‑238 (MQ=255) aaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcag < 2:507038/239‑1 (MQ=255) aaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcag < 2:40267/239‑1 (MQ=255) aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcagcc < 2:235472/239‑1 (MQ=255) aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcagcc < 2:94481/239‑1 (MQ=255) aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGcagcc < 2:992869/239‑1 (MQ=255) aGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGGTCCTGCGA‑TCCGG‑CAAAAAAGCCCGAGA‑AGGGATCGCCG‑CC‑GC‑GGA‑GGG‑CAAA‑ATGGGAACGCAGAAAAAGAGTCT‑GCCGGAAGGCGGGGGGATAGTTC‑AAAC‑ATACGATCGcagccagc > 1:615447/1‑238 (MQ=255) gggCTTGCCCGTTTATCGGGGCGAAGTTGCGAAGGGCCAGATTGGCCCGGAGATGCGCCGGGGGATTGCGAAACAAAACGGCGAAGGCGAAGGGGCT‑GGGGGGGTGGTGATCCTGCGA‑ATCGT‑CAAAAACGGCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGG‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGTCAGCTCATGGAcc < 1:1415931/238‑1 (MQ=255) ggCGGGCCCGTTTAGCTGCGCGATGTTGCGAAGGTCCAGATTGGCCGGGAGAGGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGGGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACcg < 1:583771/239‑1 (MQ=255) gTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGAGGTCCTGCGC‑TACGG‑CAAAAACGCACGAGG‑AGTGGACGCCG‑CC‑GT‑GCA‑GGA‑CCAA‑CTTGAAACGCCGCAAAGGAGTCT‑TCCGCACGGCGGGGAGAGAGTTA‑CAAA‑AAAAGACCGcagccccctccactaccgcg > 1:1346218/1‑223 (MQ=255) gTGCCCGTTTATCTGCGCGATGTTGCGAAGGCCCAGATTGGCGCGGAGATGCGCCGGGGCAGTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGGGATCTTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCgcgc < 1:1694691/239‑1 (MQ=255) gCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCa < 1:149602/239‑1 (MQ=255) gTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAagtagt < 2:880864/174‑1 (MQ=255) ttATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGAc < 2:187941/238‑1 (MQ=255) gTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCaa < 2:1544463/239‑1 (MQ=255) gTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGc < 2:1680110/228‑1 (MQ=255) gTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGGGATCCTGCGG‑TCCCG‑CAAAAACGCCCGCGA‑AGGGATCGCCG‑CC‑GT‑GAA‑GGG‑GAAA‑CTGGAAACGCGGGAAAGAAGTCT‑GCCGGAAGGGGGGGAGAGAGTTA‑CAAC‑AAAAGATCGCAGCCCGCTCATATACCGCGCCCCCGACCACCCCACCGGCAAGCTTCTggg > 1:1154965/1‑238 (MQ=255) gTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGA‑TCCGG‑CAAAAACGCCCGCGA‑AGGGATCGCCG‑CC‑GG‑GAA‑GGA‑CAAA‑ATGGAAACGCTGAAAAGAAGGTT‑GCCGGGAGGGGGGGAGATAGTTA‑AAAC‑ATACGGACGCCGCCAGCTCATTTACCGCGCCCTGCACAACCTCAGCGGCAAGTTGCTggg > 1:1717121/1‑238 (MQ=255) gTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGA‑TCCGG‑CCAAAACCCCCCGGA‑AGTGGTCGCCG‑CC‑CT‑GAA‑GGG‑CACA‑CCGGAAACGCTGCAAAGTAGTCT‑GCCCGGAGGCGTGGGGATAGTTA‑CAAC‑ACACCATCGCACCCCCCTCCTTGTCCGCGCCCTCGCCAAcccgccccttttaccccccc > 1:1059170/1‑220 (MQ=255) tCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCA‑CC‑GT‑AAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa < 2:1295728/238‑1 (MQ=255) gccAGATTGGCCCGGAGAGGCGCCGGGGCATTGCCGAACTAAACGGGGAAGCCGAAGTGGCG‑GGCGGGGTGGTGACCCTGCAA‑TCCGG‑CAAAAAGGCCCGGGA‑ATTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa < 1:1286343/237‑1 (MQ=255) ccAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGC‑TCCGG‑CCAAAAAGCCCGAGA‑AGGGATCGCCG‑CC‑GT‑GGA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGGAGTCT‑GCCGGAAGGCGGGGGGATAATTACCAAC‑A‑ACGAACGCAGCCAACTCCTTCGCCCCGACATCGCCAACCTCCACCGCAAgcagccgggag > 1:1544536/1‑229 (MQ=255) gATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGTGGTCCCGCGG‑TCCGG‑CCAAAACGCCCCGGG‑AGGGATCGCCGCCC‑GT‑G‑C‑GGG‑CAAA‑CCGGAAACGCCGGAAAGGAGTCT‑TCCGGCAGGGCGGGGGATAAGTA‑CAACAATAC‑ATCGCCGCCAACCCACTTGCCGCCCCATCCGCCCCCCCCCCGGCAAGTTGCttggcggca > 1:204533/1‑231 (MQ=255) tGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGGGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTa < 2:621037/239‑1 (MQ=255) gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGGGGGGGTCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GGA‑GGA‑CAAA‑ATGGAAACGCCGAAAAGGAGTCT‑GCCGGGAGGGGGGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCCGCCCCTTGACCGCGGCCACGACAACCTCAGCGGCAAGTTGCTGGGAGAGGTTAtt > 1:1540665/1‑239 (MQ=255) gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGTGGTCCTGCGG‑TCCGG‑CAAAAACCCCCGAGA‑AGGGATCGCCG‑CC‑CG‑GGA‑GGG‑CAAA‑CTGGGAACGCCGAAAAGAAGTCT‑GCCGGCAGGCGTGGGGAGAGGTA‑CAAC‑ATACGATACCCGCCCGCCCATTGACCGCGCCCTCCGCAACCCCACCGGCCACGTGCTGGGAGAGGTTAtt > 1:531844/1‑239 (MQ=255) gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGGTCCTGCGA‑TCCGG‑CCAAAACGCCCGAGA‑AGGGAGCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CCCGAAACGCCGAAAAGAAGTCT‑GCCGGAAGGCGCGGAGAAAGGTT‑AAAC‑AAACGAACGCAACCAGCTCATTGACCGGGCCCTCGGCACACCCACCGGCAAGCTGCTGGGAGAGattatt > 1:289377/1‑239 (MQ=255) cccGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGGGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATtg > 2:1502937/1‑239 (MQ=255) ggAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTgtgg < 2:838267/239‑1 (MQ=255) ggAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTgtgg < 2:822808/239‑1 (MQ=255) gagaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGGGG‑TCCGG‑CAAAAACGCACCAGA‑AATGATCGCCG‑CC‑GT‑GAA‑GGACCAAA‑CTGGAAACG‑GGAAAAGTAGTCC‑GCCGGGAAGAGGAGAGACAGGTA‑CAAC‑AAAAGGTCGCAGCACGCCCCGAGACCGGACCCTCGACAACCCCAGCGGCACGTTGACGGTGGAGGTTATTgtggc > 1:919361/1‑238 (MQ=255) gagaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGGGGCG‑GGCGGGGTGGTGATTCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTgtgg < 1:874487/238‑1 (MQ=255) agaTGGGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGGGGGGTGGTGATCCTGCGG‑GACGG‑CGAAAACGCCAGAGC‑AGGGAAAGCGG‑CC‑GG‑GCA‑GGA‑GATA‑GCGGAAACGCTGTAAACAAAGAT‑TCCTGGAGGCGCGGGGAGAGTTG‑TAAC‑CTCCGATAGCAACCAGCTCCTTTACACCGCCATTGTAAAACTCCTGGACGAGTTGCTGGAGGGGTTTTTTgtggtg > 1:240322/1‑239 (MQ=255) ggCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa < 2:900567/212‑1 (MQ=255) aTTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCtgtg < 2:1512411/238‑1 (MQ=255) cGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTg < 1:412437/238‑1 (MQ=255) aaCTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGGGGTCGCCG‑CC‑GG‑GGA‑GGG‑CAAA‑CTGGAAAAGCTGAAAAGGAGTCT‑GCCGGAAGGCGGGGAGATAATTA‑CAAA‑ATACGAACGCAGCCAGCTCCTTTACCGCGCCCTCGACAACCCCAGCGGCAAGTTGGTGGGAGAGtttttt > 1:900567/1‑212 (MQ=255) aaCTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGGGGGGATCCTGCGA‑ACCGG‑CAAAAAACCCCGGGG‑AGGGGGCGGCC‑CC‑GG‑GAA‑GGG‑CAAA‑CCGGAAACCCGGGAAAGAAGTCT‑GGCGGAAGGCGGGGAGGAAGGTA‑CAAC‑AAACGAAGCCCGCCAGCCCATTTGACGCGCCATCCACACCCCCACGGGCAAGCTGCTGGCAGAGTTTATTGGTGGGGCGGGAGCCTGGGGGCGGttt > 1:359736/1‑239 (MQ=255) cTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGa < 2:744532/200‑1 (MQ=255) aCGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTgg < 2:1717121/239‑1 (MQ=255) cgaaggcgaagTGGCG‑GGCGGGGGGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGGGA‑AGGGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑ATGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGGGAAAGTTA‑AAAA‑AAAAGATCGCAGCCAGCTCATTGACCGCGCCATCCACAAACTCCCCGGCCAGTTGCTGGGAGAGTTTTTTGTGGGGGGGGGGGTCTGGGCGGTGTTTTTCTGGcggg > 1:798649/1‑236 (MQ=255) gaaggcgaagGGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCAtgt < 2:741280/239‑1 (MQ=255) aggcgaagTGGCG‑GGCGGGGTGGTGACCCTGCGG‑TCCGT‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCAtgtg < 1:941944/238‑1 (MQ=255) aggcgaagTGGCG‑GGCGGGGGGGTGATCCTGCGA‑ACCGG‑CAAAAACGCCCGCGG‑AGTGATCGCCG‑CC‑GG‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGGAGGGGCGGGGATAATTT‑CAAC‑ATACGAACGCAGCCAGCTCATTGACCCCGCCATCGACAAACCCAGCGGCCAGTTGCTGGAGGAGGTTTTTGTGGTGGGGGGCGGCTGTGCGCCGGTTCTCTGGcgcgtgg > 1:389546/1‑233 (MQ=255) gaagTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCt < 2:240322/238‑1 (MQ=255) ggtggtGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATtgtg < 2:1498747/184‑1 (MQ=255) tCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCg < 2:732149/239‑1 (MQ=255) ccagCGG‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGGGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGt < 2:1713611/236‑1 (MQ=255) ccTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGt < 2:798649/239‑1 (MQ=255) ccTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGt < 2:738707/239‑1 (MQ=255) cTGCTA‑TCCGG‑CAAAAACGCCCGAGA‑ATTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATATTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGtt < 1:1076964/239‑1 (MQ=255) cTGCGA‑ACGGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAGAGTAGGCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGtt < 1:746681/239‑1 (MQ=255) gA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGGGGCGATTATTTCGTTGcc > 1:103185/1‑238 (MQ=255) a‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGcc > 1:383573/1‑237 (MQ=255) | AAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCG‑GGCGGGGTGGTGATCCTGCGA‑TCCGG‑CAAAAACGCCCGAGA‑AGTGATCGCCG‑CC‑GT‑GAA‑GGA‑CAAA‑CTGGAAACGCTGAAAAGTAGTCT‑GCCGGAAGGCGTGGAGATAGTTA‑CAAC‑ATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCC > NC_000913/599352‑599825 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |