Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	3,492,832	T→G	22.5%	G89G (GGT→GGG)	tsgA →	putative transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,492,832	0	T	G	22.5%	216.3 / 11.7	93	G89G (GGT→GGG)	tsgA	putative transporter
Reads supporting (aligned to +/- strand):  ref base T (15/54);  new base G (22/2);  total (37/56)
Fisher's exact test for biased strand distribution p-value = 1.36e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CATGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGATCGCCGCGTTTCTACTGGCGCGCAGCATTGAGTGGTACTGGGTTTATGCCTGCA  >  NC_000913/3492594‑3493070                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                      caTGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGt                                                                                                                                                                                                                                                       >  1:494937/1‑239 (MQ=255)      aTTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGa                                                                                                                                                                                                                                                   <  2:624737/238‑1 (MQ=255)         aGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑tt                                                                                                                                                                                                                                             <  2:1118212/239‑1 (MQ=255)          gCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCCGTGTGTT‑ggtt                                                                                                                                                                                                                                             >  1:930322/1‑236 (MQ=255)              tctctcCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTT‑CCGGGTTgtgttttagc                                                                                                                                                                                                                                           >  1:279555/1‑229 (MQ=255)                    cTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGcc                                                                                                                                                                                                                                  <  2:821702/239‑1 (MQ=255)                     tACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑TCGGGTTTGT‑G‑TTCAGCCACAg                                                                                                                                                                                                                                    >  2:267439/1‑236 (MQ=255)                            tgactgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑T‑TTCAGc                                                                                                                                                                                                                                         >  2:595990/1‑224 (MQ=255)                            tgactgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGc                                                                                                                                                                                                                                         <  1:595990/224‑1 (MQ=255)                            tgactgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCCGTTTTAT‑G‑TTTGTCCACAGCCTGgc                                                                                                                                                                                                                              >  2:862041/1‑235 (MQ=255)                              actgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGTT‑T‑TTTTGCCACAACCCGgggccct                                                                                                                                                                                                                         >  2:459427/1‑235 (MQ=255)                                   tGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑TCGGGTTGTG‑G‑TTTAGACACAACCCGGGGCTGTTTTcgg                                                                                                                                                                                                                   >  2:1092663/1‑239 (MQ=255)                                        ttgTTATTGTCACCGAGATGGTGATTGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATTCCTTCACCTGCCTCAACGCCCGCATTTTAATCTCTAACATCTTCAACCCCTGTCTTATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTTGCGGTTG‑CCGGTTTGAT‑C‑GCCAGCCACAGCCTGGCCTTGTTCTCGgcggcg                                                                                                                                                                                                              <  1:1231501/237‑1 (MQ=255)                                        tGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAGCGCAGTTACGTTTTGGCTTTCTCCTGATGGAGCTGGCGGTTA‑CCCGGTTGGT‑G‑TTTTTCCACAACCTGGCGCTGGtcttactggcg                                                                                                                                                                                                              >  2:408429/1‑231 (MQ=255)                                        tGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCGGCCACAGCCTGGCGCTGTTCTCGgcggcg                                                                                                                                                                                                              <  1:258080/239‑1 (MQ=255)                                        tGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCggcggc                                                                                                                                                                                                               <  2:930322/238‑1 (MQ=255)                                        tGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCCGTTTGAT‑G‑TTTTGCCGCACCCTGGCGCTGTTTTCGggggcg                                                                                                                                                                                                              >  1:595762/1‑239 (MQ=255)                                        tGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCCGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGgcggcg                                                                                                                                                                                                              >  2:982224/1‑239 (MQ=255)                                          gTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGag                                                                                                                                                                                                            >  2:115900/1‑238 (MQ=255)                                             aTTGTTTCCGGCATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATCCCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGTCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGtt                                                                                                                                                                                                         <  1:39061/239‑1 (MQ=255)                                             aTTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGtt                                                                                                                                                                                                         <  2:623437/239‑1 (MQ=255)                                             aTTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGGTTGTT‑G‑GTTGCTCACCGCCCGGGGCTGGTTTcggcgggcgcggt                                                                                                                                                                                                         >  1:632679/1‑232 (MQ=255)                                                  cACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATtc                                                                                                                                                                                                    <  2:164971/239‑1 (MQ=255)                                                  cACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATtc                                                                                                                                                                                                    <  2:690021/239‑1 (MQ=255)                                                    ccGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGTT‑T‑TTTAACCACCCCCTGGCGCTGTTCTCGgcggcgcggtttttttt                                                                                                                                                                                                   >  1:1116213/1‑227 (MQ=255)                                                    ccGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGGTTTGT‑G‑TTTTGCCAACGCCTTGCGCTGGTTTctgcgggccggctcttttt                                                                                                                                                                                                   >  1:1110395/1‑225 (MQ=255)                                                     cGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCg                                                                                                                                                                                                 <  2:555779/239‑1 (MQ=255)                                                              gATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTc                                                                                                                                                                                         <  2:187361/238‑1 (MQ=255)                                                              gATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTc                                                                                                                                                                                         <  2:869716/238‑1 (MQ=255)                                                                  ggAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTT‑CCGGGTTGGTGG‑TTCGCCCACA‑CCCGTCGCTGTTTTCCGCGGCGGTGTGTGTCTTCGGGGGGGTCCGCgg                                                                                                                                                                                    >  1:187361/1‑239 (MQ=255)                                                                   gAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCgg                                                                                                                                                                                    <  1:986548/238‑1 (MQ=255)                                                                       tatCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑tt                                                                                                                                                                                                                                             <  1:229385/177‑1 (MQ=255)                                                                       tatCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑tt                                                                                                                                                                                                                                             >  2:229385/1‑177 (MQ=255)                                                                       tatCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGGTTTGT‑T‑TTTAGCCACAGCCTTGCGGTGTTCTCGGCGGGGGTGTTCATTCTCGGGGGGGGCAGGGGCCT‑c                                                                                                                                                                               >  2:1224199/1‑238 (MQ=255)                                                                            ccGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTTAGCCACAGCCTGGCGCTGTTCTCGgcggcg                                                                                                                                                                                                              >  2:406690/1‑203 (MQ=255)                                                                            ccGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGgcggcg                                                                                                                                                                                                              <  1:406690/203‑1 (MQ=255)                                                                            ccGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATg                                                                                                                                                                         <  1:119813/239‑1 (MQ=255)                                                                                 tattTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGAt                                                                                                                                                                    <  2:1022552/239‑1 (MQ=255)                                                                                 tattTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGAt                                                                                                                                                                    <  1:471881/239‑1 (MQ=255)                                                                                 tattTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGAt                                                                                                                                                                    <  1:561361/239‑1 (MQ=255)                                                                                     tCAATATGGCTGTTCCCAGTATGAGTAATACCTTCACCTTCCTCAACGTCGGCATTGTAATCACTACCTTCCTCAACGCCTGGCTGAGGGAAATCGACCCGTTGAAAACGCAGGGACGTTTTGCCATTCTCCTGATGGTGCTGGTGGGTG‑CCTGTTTGAG‑G‑TTCAGGAACAGCGTGGCGCTGTACTAGGCGGGGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGaattgt                                                                                                                                                                <  1:607590/239‑6 (MQ=255)                                                                                      cAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTa                                                                                                                                                               <  2:664211/239‑1 (MQ=255)                                                                                             ccTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGGTTGTT‑G‑TTCTGCCACAGCCTTGCGCTGTTCTCGGCGGGGATGGTCATTCTCTGGGGGGTCCCGGGCAG‑CCCCATTCCGCTTGGTGCA‑CTc                                                                                                                                                         >  2:247868/1‑237 (MQ=255)                                                                                               tGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTgg                                                                                                                                                     <  1:115900/239‑1 (MQ=255)                                                                                                    ccAGTATGAGTAATCCCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAac‑a                                                                                                                                               <  1:907034/239‑1 (MQ=255)                                                                                                    ccAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTT‑CCGGGTTTTT‑G‑TTTAGCCACAGCCTGGCGGTGTTCTCTGCGGCGGTGTTTATTCTCGGGGGGGTCAGCGGGCT‑CACCACGGCGCTTgggtcaattctcggaac                                                                                                                                                  >  2:270592/1‑223 (MQ=255)                                                                                                    ccAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAac‑a                                                                                                                                               <  2:494937/239‑1 (MQ=255)                                                                                                         aTGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAc‑aca                                                                                                                                             <  2:279555/236‑1 (MQ=255)                                                                                                         aTGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAc‑aca                                                                                                                                             <  1:982224/236‑1 (MQ=255)                                                                                                         aTGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGGTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAc‑aca                                                                                                                                             <  2:723876/236‑1 (MQ=255)                                                                                                                 tACCCTCACCTTCCTAAACGACGGCATTTTAATCTCTATCTGCCGCAACGCCTTGCTGATGGAAATGGTCCCGTTTAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑GCGGTTTGAT‑G‑TTCGGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAg                                                                                                                                  <  1:408429/239‑1 (MQ=255)                                                                                                                  accttcaccttcCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATg                                                                                                                                                                         <  2:879781/201‑1 (MQ=255)                                                                                                                  accttcaccttcCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGGTTGGT‑G‑TTTAGCCACAACCTGGCGCTGTTCTCGGGGGGGGTGTTCATTCTTGGGGGGGGCAGCGGCAT‑CACCATGGTGGTTGGGACA‑TTCCTGGGAAA‑AAAAATGTATGTAgg                                                                                                                                 >  2:183389/1‑239 (MQ=255)                                                                                                                  accttcaccttcCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGGTTGAT‑G‑TTTAGCCACAGCCCGGCGCTGTTCTCGGCGGCGGTGTTCATTTTCGGGGGGGTCAGCGGCCT‑CACCCTGGCGCGTGGTACA‑TTTCTGGGTAA‑AAAAATGGATGTAgg                                                                                                                                 >  2:568932/1‑239 (MQ=255)                                                                                                                  accttcaccttcCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGGTTGAT‑G‑TTCAGCCACAGCCTTGCGCTGGTTTCGGCGGCGGCGGTTCTTTTCGGGGGGGGCAGGGGCGC‑TACCCTGTCGGCTGGGTCA‑TTCCTTGTAAC‑ACAAATGTATGAAgg                                                                                                                                 >  1:224158/1‑239 (MQ=255)                                                                                                                      tcaccttcCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGTT‑G‑TTCAGCCCCAGCCTTGCGCTGTTCTCGGCGGCGGTGTTCATTCTCGGGGGGGGCAGCGGCAT‑CACCATGACGGTTGGGTCA‑TTTCTGGTAAC‑AACAATGTATGAAAGGCg                                                                                                                              >  2:551623/1‑238 (MQ=255)                                                                                                                           ttcCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAgcg                                                                                                                        <  2:754025/239‑1 (MQ=255)                                                                                                                           ttcCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAgcg                                                                                                                        <  2:85346/239‑1 (MQ=255)                                                                                                                           gtcCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATTGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTCCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATTAAGGGCGTCAgcg                                                                                                                        <  2:661782/238‑1 (MQ=255)                                                                                                                             ccTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCCGGTTTAT‑G‑TTCTGCCACAACCCCGCGCCGTTTTCCGCGGCGAGGTTCTTTTTCTTGGGGGGGAGCGGCGT‑CCCCCTTTCCAGTGTGACC‑TTCCTTGTTACAACAAatatataagtggctttgcagc                                                                                                                       >  1:378722/1‑224 (MQ=255)                                                                                                                                      cGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGc                                                                                                            <  2:632679/238‑1 (MQ=255)                                                                                                                                      cGGAATTTTAATCTCTATTTTCCGCAACGCCTGGCTGATGGAAATCGCCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGc                                                                                                            <  1:862041/238‑1 (MQ=255)                                                                                                                                       ggCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGGTTGAT‑G‑TTCAGCCACAACCTGGCGCTGTTTTCGGCGGCGGTGTTTATTTTCGGGGGGGGCAGCGGCAA‑CACCCTGTCGGTTTGTACA‑TTTCTGGTAAA‑ACCAAAGTAAGAAGGGCGGTCGCGC‑GG‑GTCCCGc                                                                                                            >  2:1011678/1‑237 (MQ=255)                                                                                                                                        gCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTT‑CCGGGTTTTT‑T‑TTTTGCCCCAGCCTGGCGCTTTTGTCGGCGGGGGTGTTGATTTTTCGGGGGGTCCGCGGCGT‑CACCCCTTCGATGTGTAGC‑TTTCTTGTACC‑AACAAAGTTTGAAGGGTGTCCTCGC‑CG‑GTACCGcccg                                                                                                         >  1:793892/1‑237 (MQ=255)                                                                                                                                        gCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGGTTTGT‑G‑TTCAGCCCCCACCCGGCGCCGTTCTCGGCGGGGGTGTTTCTTTTCCGGGGGGGTAGCGGCAT‑CCACATGTCGCTTGGTACA‑TTTCTGGGAAA‑ACAAAAGTTTTGAAGGCGGCACCGCGGG‑TTCCCCCCt                                                                                                          >  1:310167/1‑239 (MQ=255)                                                                                                                                        gCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGGTTGAT‑G‑TTCAGCCCCAACCTGGCGCTGTTCTCGGCGGCGATGTTCCTTCTCGGGGGGGTCCGCGGCAT‑CACCCTGTCGGTTGGTACA‑TTTCTTGGAAA‑ACAAAAGTATGAAGGGCGTCGGCGC‑GG‑GTcccc                                                                                                             >  2:871968/1‑234 (MQ=255)                                                                                                                                                  ctctATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTGG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCg                                                                                               <  2:736423/239‑1 (MQ=255)                                                                                                                                                    ctATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGAc                                                                                             <  2:738349/239‑1 (MQ=255)                                                                                                                                                    ctATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTGTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGAc                                                                                             <  2:696644/239‑1 (MQ=255)                                                                                                                                                     tATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGGTTGTT‑G‑TTCTGCCACCACCTGGCGCTGTTTTCGGCGGCGGTGTTTCTTTTCTGGGGGGGCAGGGGGCT‑CCCCCTCTCGGTTGGGACA‑TTTCTGGTTAC‑ACAAACGTATGCAGGGAGTCACGGC‑GG‑GTCCCGCCCGGTAGTTATCGag                                                                                             >  1:217970/1‑237 (MQ=255)                                                                                                                                                     tATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCCGTTTTAT‑G‑TTTCGCCACACCCCGGCGCTGTTCTCGGCGGCGGTGTTTTTTCTCGGGGGGGTGCGCGGCAT‑CACCCTGTCGAGTGGGACA‑TTCCCGGTAAC‑CACAATGTATGGAGGGCGTCAGCGC‑GGTTTCCCGCC‑GTTGTTTACCCAc                                                                                             >  1:700054/1‑238 (MQ=255)                                                                                                                                                          tCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCcttc                                                                                       <  2:473995/239‑1 (MQ=255)                                                                                                                                                          tCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTGGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCcttc                                                                                       <  1:888302/239‑1 (MQ=255)                                                                                                                                                            cTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGATGTCCGGTTT‑AT‑GTTTCAGCC‑CAGCCTGGCGCGGGTCTCGGCGGCGGTGTTTCTTCTCGGGGGGGTCCGGGGCATACCCCACG‑CGGTTGGGGCG‑ATCCCGGTAAC‑AAACACTGAAGAGGGGGGGCACGCC‑GG‑TTCCCCCCCGTTTTTTAACGGCTCcttctt                                                                                     >  1:609147/1‑239 (MQ=255)                                                                                                                                                               aaCGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGGTTTTT‑G‑TTTAGCCACAACCTGGCGCTGTTCTCGGCGGCGATGTTTCTTTTCCGGGGGGGCCGCGGCAT‑CACCCTGTCGATTTGTACA‑TTTCTGGGAAC‑ACAAAAGGATGAAGGGGGGCAACGC‑GG‑TTCCCGCCTGTTATTTTCCCACTCcttct                                                                                      >  2:243356/1‑235 (MQ=255)                                                                                                                                                                 cGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCCGTTTTAT‑G‑TTTAACCACAGCCTGGCGCTGGCCTCGGCGGGGCGGTTTCTTTTCGGGGGGGTTACCGCGGA‑CCCCACGGCGGTTGGGACA‑TTCCTCGGTAC‑ACACATCCATAACGGGGGCGACGCC‑GG‑TTCCCCCCCGTTATTTTCCGCCCCCTTCTTCAgca                                                                                >  1:12840/1‑237 (MQ=255)                                                                                                                                                                     tGGCGGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTGGCTCCGGATGGTGCTGGCGGTTG‑CCGGTTGGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTAAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGc                                                                            <  1:315058/239‑1 (MQ=255)                                                                                                                                                                      ggCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGATT‑CCGGGTTGTT‑T‑TTGAGCCACACCCCGGCGCTGCTTTGCGGGGCGATGGTTATTTTCTGGGGGGGGCGGGGCAT‑CCCCATGGCGGTTAGGTCA‑TCGCTGGTGAT‑ACAAAAGTATGGACGTGGTTATCGC‑GG‑GTCCCGCCTTTTTTTTaaccacaccccattcactgtg                                                                              >  1:910672/1‑216 (MQ=255)                                                                                                                                                                                aaTCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGAttt                                                                 <  2:1110395/239‑1 (MQ=255)                                                                                                                                                                                           tGAAACCGCAGTTACGTTTTGGCTTTCGCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGAt                                                       <  2:910672/238‑1 (MQ=255)                                                                                                                                                                                              aaaCGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGATcgc                                                    <  2:1116213/238‑1 (MQ=255)                                                                                                                                                                                                  gCAGTTACGTTTTGGCTTTCTCCTGATGTTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGATCGCCGCGt                                               <  1:267439/239‑1 (MQ=255)                                                                                                                                                                                                              tGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCCGGTTTAT‑G‑TTTAGCCACAACCTGGCGCTGTTCTCCGCGGCGGTGTTTATTCTCGGGGGGGGTCCCGGGAT‑CACCCAGGCCGTTGGTGCATTTCTTGGAAAC‑ACAAA‑GTATGAAAGGCGGCCGCGC‑GG‑TTTCCGCCCGCTATTTTCCGGCGCCCTCTTCAGGATGGCTGGGGTGGTTTTTCCCATGATccgcccggttcttctttgg                                    >  1:418257/1‑220 (MQ=255)                                                                                                                                                                                                               ggCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTTAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGATCGCCGCGTTTCTACTGgcgcg                                  <  1:243356/239‑1 (MQ=255)                                                                                                                                                                                                               ggCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGATCGCCGCGTTTCTACTGgcgcg                                  <  2:716080/239‑1 (MQ=255)                                                                                                                                                                                                                 cTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGATCGCCGCGTTTCTACTGgcgcgc                                 <  2:1196394/238‑1 (MQ=255)                                                                                                                                                                                                                    tctcCTGATGGTGCTGCCGGTTG‑CCGTTTTGAT‑G‑TTCAGCCACGGCCTGGCGTTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CCCCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGATCGCCGCGTTTCTACTGGCGCgcagca                             <  1:1092663/239‑1 (MQ=255)                                                                                                                                                                                                                      tcCTGATGGGGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGATCGCCGCGTTTCTACTGGCGCGCAGCAtt                           <  2:190759/239‑1 (MQ=255)                                                                                                                                                                                                                         tGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGATCGCCGCGTTTCTACTGGCGCGCAGCATTGAg                        <  2:708370/239‑1 (MQ=255)                                                                                                                                                                                                                         tGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGATCGCCGCGTTTCTACTGGCGCGCAGCATTGAg                        <  2:958657/239‑1 (MQ=255)                                                                                                                                                                                                                                gatGGCGGTGG‑CCGGGTTGAG‑T‑TTAAGCCACGTCCGGGCGTTGTTCTCGGCGGCGAGTTTCATTCGCGGGGTGGTCAGCGGCAT‑CTCCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATTATTTTCCCAATGATCGCCGCGTTTCTACTGGCGCGCAGCATTGAGTGGTAc                  <  1:968479/236‑1 (MQ=255)                                                                                                                                                                                                                                         tG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGATCGCCGCGTTTCTACTGGCGCGCAGCATTGAGTGGTACTGGGTTTATg        <  2:733604/239‑1 (MQ=255)                                                                                                                                                                                                                                          g‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGATCGCCGCGTTTCTACTGGCGCGCAGCATTGAGTGGTACTGGGTTTATGc       <  1:1083182/239‑1 (MQ=255)                                                                                                                                                                                                                                               gTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGATCGCCGCGTTTCTACTGGCGCGCAGCATTGTGTGGTACTGGGTTTATGCCTg    >  2:394082/1‑238 (MQ=255)                                                                                                                                                                                                                                                tttGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGATCGCCGCGTTTCTACTGGCGCGCAGCATTGAGTGGTACTGGGTTTATGCCTGCa  <  1:183389/239‑1 (MQ=255)                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                      CATGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTG‑CCGGTTTGAT‑G‑TTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCAT‑CACCATGTCGATTGGTACA‑TTCCTGGTAAC‑ACAAATGTATGAAGGGCGTCAGCGC‑GG‑TTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGATCGCCGCGTTTCTACTGGCGCGCAGCATTGAGTGGTACTGGGTTTATGCCTGCA  >  NC_000913/3492594‑3493070

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑