New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 110493080 (1.250)7 (0.120) 6/266 7.4 8.3% intergenic (+28/‑31) csgA/csgC curlin subunit, amyloid curli fibers, cryptic/curli assembly protein
?NC_000913 = 1104934 79 (1.320)intergenic (+32/‑27) csgA/csgC curlin subunit, amyloid curli fibers, cryptic/curli assembly protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTT  >  NC_000913/1104794‑1105069
                                                                                                                                        |                                                                                                                                           
aCAGGTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGTCTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTAGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGc                                                                                                                                       <  2:587035/143‑1 (MQ=255)
 cAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGTTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGcc                                                                                                                                      <  1:729308/143‑1 (MQ=255)
    ttCGGTGGTGGCAACGGTGCGGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGgcttgcgccctg                                                                                                                                   <  1:287858/143‑11 (MQ=255)
     tCGGTGGTGGCAACGGTGCGGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGt                                                                                                                                  <  2:454169/143‑1 (MQ=255)
       tttgttggCAACGGTGTTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTTAGGTTGGGTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGttt                                                                                                                                <  2:386881/138‑1 (MQ=255)
       ggtggtGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGgcttgcgccctgttt                                                                                                                                <  1:732051/143‑14 (MQ=255)
        gtggtgGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGgcttgcgccctgtttc                                                                                                                               <  2:412915/143‑15 (MQ=255)
        gtggtgGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGCAACAACGCGACCGCTCACCAATACTAATACATCAATTATATTACAGAAACAGGGCGCAAGCCCTGttcc                                                                                                                               >  2:611257/1‑141 (MQ=255)
         tggtggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGttttt                                                                                                                              >  1:573647/1‑143 (MQ=255)
          gttggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGtttttt                                                                                                                             <  1:75488/141‑1 (MQ=255)
              gccaCGGTGCGGCAGTGCGCCAGACTGCATCTATCTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATATATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCg                                                                                                                         <  2:91526/140‑1 (MQ=255)
               cAACGGTGCTGTAGTTGTCTAGACTGCATCTAACTCGTCCTTTAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCAGCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCgg                                                                                                                        <  1:873065/143‑1 (MQ=255)
                 aCGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGga                                                                                                                      <  1:647380/143‑1 (MQ=255)
                       tttcAGTTGACCATATTGCATCTAACTCGTCCGTCAATGTGACTTAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTATAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAgaagaa                                                                                                                <  2:817882/140‑1 (MQ=255)
                        tgcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGCGacaacact                                                                                                               >  2:308056/1‑139 (MQ=255)
                         gcAGTTGACCAGACTGCATCTAACGCCTCCGTCAACGTGAGTGAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATGACAGAAACAGGGCGCAAGCGCTGTTTTTTTTCGGGGGAAGAata                                                                                                              >  1:261836/1‑143 (MQ=255)
                             ttGACCAGACTGCATCTAACTCCTCCGTCAACCTGACTCATGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAACATGaa                                                                                                          >  2:796095/1‑143 (MQ=255)
                               gACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATa                                                                                                        <  1:898311/143‑1 (MQ=255)
                                 ccAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGCGACGAATATGACTACg                                                                                                      >  1:1109519/1‑143 (MQ=255)
                                 ccAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACg                                                                                                      >  1:106626/1‑143 (MQ=255)
                                  cAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTATTTTTCGGGAGAAGAATATGAATACga                                                                                                     >  2:1057841/1‑142 (MQ=255)
                                   aGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGACGACGtg                                                                                                    >  1:351552/1‑142 (MQ=255)
                                          aTCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTc                                                                                             >  1:823395/1‑143 (MQ=255)
                                           tCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTcg                                                                                            >  2:1055312/1‑142 (MQ=255)
                                            cTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCCTTTGTATTACAGAAACAGGGCGCAAGCCCTGATTTTTGTCGGGAGAAGCATATGACTACGTGCGTACTCCt                                                                                           >  1:989258/1‑143 (MQ=255)
                                            cTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCCGTTTTTTTTAGGGAAAAGAATATAAATACGTTATTAATCCt                                                                                           >  1:180805/1‑143 (MQ=255)
                                               aCTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGTAGAATATGAATACGTCATTACTCCTTGc                                                                                        <  2:548317/143‑1 (MQ=255)
                                                cgccgctggcagcGTGTCTCTGGTTGTGTTTGGTAACGGCGCGTCCGCTCATCAGTACTAATACTTCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCg                                                                                       <  2:1106084/131‑1 (MQ=255)
                                                 tcctccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGCAGAATATGAATACGTTATTACTCCTTGCgg                                                                                      >  2:259434/1‑143 (MQ=255)
                                                 ccccccGACAACGTGGCTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCgg                                                                                      <  1:278778/139‑1 (MQ=255)
                                                   ctccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTCTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCa                                                                                    >  1:589015/1‑143 (MQ=255)
                                                    tccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCAc                                                                                   >  1:539689/1‑143 (MQ=255)
                                                        tCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTc                                                                               <  1:1115499/143‑1 (MQ=255)
                                                        gcgacgtcccTCAAGTTGGTCTTGGTCACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGTGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTc                                                                               <  2:85608/134‑1 (MQ=255)
                                                           aCGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTCCAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTCTCCAg                                                                            >  1:840786/1‑143 (MQ=255)
                                                            cacgACGCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGCAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGt                                                                           <  1:623967/140‑1 (MQ=255)
                                                               gACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTGTTTTTTCGGGAGAAGAATATGAATACGGTATTACTCCTTGCGGCACTTTCCAGTCAg                                                                        >  2:1104469/1‑143 (MQ=255)
                                                                  tCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATa                                                                     >  2:225049/1‑143 (MQ=255)
                                                                  tCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACCCCTTGCGGCACTTTCCCGTCACATa                                                                     >  2:583515/1‑143 (MQ=255)
                                                                  ccAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATa                                                                     <  1:539756/142‑1 (MQ=255)
                                                                   cAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATaa                                                                    <  2:945296/143‑1 (MQ=255)
                                                                    aggtaggggttGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAAc                                                                   <  1:746917/134‑1 (MQ=255)
                                                                    aGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATagc                                                                   >  1:840408/1‑141 (MQ=255)
                                                                      gTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCAGCGCTTTCCAGTCAGATAActt                                                                 >  2:807123/1‑141 (MQ=255)
                                                                           cTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTTCTCCTGGCGGCACTTTCCAGTCAGATAACCTTTAAt                                                            >  1:753750/1‑143 (MQ=255)
                                                                            tttGGTAACAACGCGACCGCTCATCAGTACGAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATa                                                           <  2:277830/143‑1 (MQ=255)
                                                                            tttGGGAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATa                                                           >  2:924881/1‑143 (MQ=255)
                                                                            tttCGTAACAACTCGACCGCTCATCAGTACTAATGCATCATTTGTATTGCAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATa                                                           <  2:973829/143‑1 (MQ=255)
                                                                             ttGGTAACAACGCGACCGCTCATCAGTACTAATACATCAATTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATAc                                                          <  1:227344/143‑1 (MQ=255)
                                                                              tGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCCGATAGGCTTTAGTACg                                                         >  1:520924/1‑143 (MQ=255)
                                                                               ggTAACATCGCGACCGCTCATCAGTCCTAATACATCATTTGTATTACAGAAACAGCGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGa                                                        <  1:59783/143‑1 (MQ=255)
                                                                                gTAACAACGAGACCGCTCATCAGTACTAATACATCATTTGTAATACAGAAACAGGGCGCAAGACCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCAGCACTTTCCAGTCAGATAAGCTTTAATACGAc                                                       >  1:1028413/1‑143 (MQ=255)
                                                                                   acaacaCGAGCGCTCGTCAGTACGACTACATCATGTTTATTACAGATACAGGGCGCAAGCCCTGTTTGTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCa                                                    <  2:278189/143‑1 (MQ=255)
                                                                                   acaacGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCa                                                    >  2:591829/1‑143 (MQ=255)
                                                                                     aacGCGACCGCTCATCAGTACTAATACATAATATATAGAACAGAAACAGTGCTGGAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGc                                                  >  1:764136/1‑143 (MQ=255)
                                                                                        gcgACCGGTCATCAGGTGTAAGTCATCGTTTGGAGTACGGAAACAGGGCGGAAGCCCTGTTTGTTTTCGGGGGGAGAATCTGTACCCGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAg                                               <  2:202009/143‑1 (MQ=255)
                                                                                          gACCGCTCATCAGTACTAATACATCATGTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAggg                                             <  1:550062/143‑1 (MQ=255)
                                                                                           aCCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAgggg                                            >  2:208450/1‑143 (MQ=255)
                                                                                            ccGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATCCGACCCACCAAGGGGa                                           >  2:1066767/1‑143 (MQ=255)
                                                                                              gCTCAGCAGTACGAAGACATCTTTTGTATTACAGAAACAGGGCGCAAGCCCTGTTGTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTGTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAtg                                         <  2:100139/143‑1 (MQ=255)
                                                                                                tcatcaGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAtgtg                                       >  2:588138/1‑143 (MQ=255)
                                                                                                  atcaGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGCAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGta                                     >  2:945604/1‑143 (MQ=255)
                                                                                                  atcaGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGta                                     <  2:539689/143‑1 (MQ=255)
                                                                                                           aaTACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCattat                            >  1:878564/1‑143 (MQ=255)
                                                                                                            aTACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATAAGAACACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCattatt                           <  1:1108523/143‑1 (MQ=255)
                                                                                                             tACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTc                          >  2:799073/1‑143 (MQ=255)
                                                                                                              aCATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCANATAACCGTTAATACGACCCAGCAAGGGGGTGTGTGTACCATTATTca                         >  2:160086/1‑142 (MQ=255)
                                                                                                              aCATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAAAATATGAATAAGTCATAACTCCTTCCGGCACTTTCCAGGCAGATAACCTTTCATCCGACCCAGCAAGGGGCAGTGGATACCATTAGTcc                         >  2:442048/1‑143 (MQ=255)
                                                                                                               catcttTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCt                        <  2:573647/143‑1 (MQ=255)
                                                                                                               catcatTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCt                        >  1:843255/1‑143 (MQ=255)
                                                                                                                  cttttGTAGTACAGCAACAGGGCGCCAGCCCTGTGTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTGTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGaa                     <  2:345209/141‑1 (MQ=255)
                                                                                                                   atTTGTATTACAGAATCAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATCCGACACAGCAAGGGGCAGTGTATACAATTATTCCTGAAg                    >  2:141295/1‑143 (MQ=255)
                                                                                                                      tGTCTTACAGCACCAGGGCGCAAGCCCTGTTTTTTTTCGGCAGAAGAATATGCATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCa                 <  1:742643/143‑1 (MQ=255)
                                                                                                                         aTTACAGAAACAGGGCGCAAGCCCTGTTGTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCActc              <  2:684609/143‑1 (MQ=255)
                                                                                                                              aGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAATTCACTCTTACt         >  2:1044986/1‑143 (MQ=255)
                                                                                                                              aGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTACTGAAGTCACTCTTACt         >  2:55947/1‑143 (MQ=255)
                                                                                                                                aaaCAGGGCGCAAGCCCTGTTTTTTTTCGGTAAAAGAAAATGTGTACGTTATTCCTCCTTGCGGCACTGTCCAGTCACAGGACCTTTAATACGACCCAGCACAGGGCTGTGGATACCATTATTCCCGaaagcaccagtactca       >  2:1034918/1‑129 (MQ=255)
                                                                                                                                aaaCAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGGCACTCTTAcgcg       >  1:824170/1‑140 (MQ=255)
                                                                                                                                aaaCAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAATCAGATAACCTTTAATACGACCCCGCAAGGCGAGGTGGATACCCTTATTCCTGGACTCACTCTTACTCa       >  2:108290/1‑143 (MQ=255)
                                                                                                                                  aCAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGCATACGTTATTACTCCTTGCGGCCCTTTCCAGTCCGATAACCTTTAATACGACCCAGCCAGGGGATGTGCATACCATTATTTCTGCAGCCTCTCTTCCTCCAt     >  2:864544/1‑143 (MQ=255)
                                                                                                                                   cAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGGCACTCTTACTCAATc    >  1:731051/1‑143 (MQ=255)
                                                                                                                                    aGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTGCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGCTTTGTATACCATTATTCCTGAAGTCCCTCTTACTCCATCt   >  2:666782/1‑143 (MQ=255)
                                                                                                                                     gggCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCtt  <  1:225049/143‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                           
ACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTT  >  NC_000913/1104794‑1105069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.