New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 292301	80 (1.250)	5 (0.080)	5/264	7.9	6.2%	intergenic (+70/+21)	yagJ/yagK	CP4‑6 prophage, uncharacterized protein,Phage or Prophage Related/CP4‑6 prophage, conserved protein
	?	NC_000913	= 292302	78 (1.320)					intergenic (+71/+20)	yagJ/yagK	CP4‑6 prophage, uncharacterized protein,Phage or Prophage Related/CP4‑6 prophage, conserved protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTA  >  NC_000913/292167‑292442                                                                                                                                        |                                                                                                                                             cggtgtcTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAg                                                                                                                                       <  1:243692/137‑1 (MQ=255) cTGTTGCTACCGTTGAAATTGCATAAACTTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAg                                                                                                                                       <  1:133585/143‑1 (MQ=255)       cTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTACCGCCACTGCATTTTAGTAATTTTTTGAAACAATCCAAATAAGGACTTCTCACTCACACGGCCAtt                                                                                                                                 >  1:512202/1‑143 (MQ=255)       cTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCAtt                                                                                                                                 <  1:777649/143‑1 (MQ=255)        tACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTa                                                                                                                                >  2:1082987/1‑143 (MQ=255)        tACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTa                                                                                                                                >  1:230367/1‑143 (MQ=255)             cTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGAc                                                                                                                           >  2:404515/1‑143 (MQ=255)              tGAAAATGCAGAAACGTTAGTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACt                                                                                                                          <  1:169180/143‑1 (MQ=255)                aaaaTGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGCATCTACGCAGACTTAAGAAAAGTGTGTCGAGATGTCACACGCGAGTAATTTTTTGCAACAATACAAATAAGGCCTTCTCACTGAGACGGCCCTTACGGACCTa                                                                                                                        >  1:1112478/1‑143 (MQ=255)                aaaaTGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTa                                                                                                                        >  2:556421/1‑143 (MQ=255)                 aaaTGTATAAATGTTCTTTAGTAGCGGACTTGCTGATGATTATCAGTAATTTATAGAAAATTGCGTAACTAATCTGCATTTTATTAATTTTTTGAAACAATACAAATAAGTCCTTCTCACTGAGAAGGCTATTACCGACTTAc                                                                                                                       <  2:634510/143‑1 (MQ=255)                  aaTGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAGTACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACa                                                                                                                      >  1:1103852/1‑143 (MQ=255)                  aaTGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACa                                                                                                                      <  1:134647/143‑1 (MQ=255)                    tGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTTTAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCAATGAGAAGGCCATTACCGACTTACAGt                                                                                                                    >  2:814997/1‑143 (MQ=255)                    tGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGt                                                                                                                    >  1:798952/1‑143 (MQ=255)                        gAAACGTTATTCTGTAGGGGACTTGCTGATGACTATCAGTAATCTATAGAAAAATGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGa                                                                                                                <  2:592102/143‑1 (MQ=255)                           aCGTTATTTAGTAGCGGACTTGCTGATGACTATCAGAAAAACATAGTAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGAttt                                                                                                             >  1:763134/1‑143 (MQ=255)                            cGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAATGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTg                                                                                                            <  1:638269/143‑1 (MQ=255)                             gTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCCCTGAGAAGGCCATTACCGACATACAGTTCGATTTgg                                                                                                           >  2:24693/1‑143 (MQ=255)                             gTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTgg                                                                                                           <  1:367857/143‑1 (MQ=255)                              tgaTTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAAGTGCGTAACGCAACTGCATGTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGCATGACAGTTCGATTTGGc                                                                                                          >  2:65669/3‑143 (MQ=255)                                  ttAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACa                                                                                                      <  2:414274/143‑1 (MQ=255)                                     gtagCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTTCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCAATGAGAAGTCCATTACCGACTTACAGTTCGATTTGGCTACAGcc                                                                                                   <  2:340407/143‑1 (MQ=255)                                        gcgtaccggCTGATGACTATCAGTAATCGATAGAAAAGTGCGTAATCAACCTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGaa                                                                                                <  2:531867/135‑1 (MQ=255)                                        gCGGACTTGCTGATGACTATCAGTAATCTATATAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGaa                                                                                                >  2:581731/1‑143 (MQ=255)                                        gCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGaa                                                                                                >  1:940858/1‑143 (MQ=255)                                          ggACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTTCAGTTCGATTTTGCTACAGCCGAAGt                                                                                              >  1:137926/1‑143 (MQ=255)                                           gACGTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGtt                                                                                             <  2:734500/143‑1 (MQ=255)                                              ttgttgATGATTATTAGTAATCTCTAGATAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAATTAAGGCCTTCTCACTGATAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACg                                                                                          <  2:288486/143‑1 (MQ=255)                                              ttGCTGATGACGATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACg                                                                                          <  1:768108/143‑1 (MQ=255)                                                gCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTAAATGAGAAGGCCATTACCGAATTACAGATGGATTTAGCGACAGCCGGAGATACGGt                                                                                        >  2:361963/1‑143 (MQ=255)                                                  tgatgaCTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATATTAGTAATTTTTTGAAAAAATGCAAATGTGTTTGTGTCGTTGCGAAGGCCATTACCGACGTACAGTTCGTTTTGTCTTCAGCCGAACTTActggct                                                                                      >  2:903260/1‑138 (MQ=255)                                                   gatgaCTATCAGTACTCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATACGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGCTACCGtctc                                                                                     >  2:370656/1‑143 (MQ=255)                                                   gatgaCGATCAGGAATCTATAGAAAATTGCGTAACGAAACAGCATGTTAGTAATTGTTTGAAACAATACAAATAAGGCCTGCGCACTGAGAAGGCCAGTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGtctc                                                                                     <  1:507566/143‑1 (MQ=255)                                                   gataaCTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGtctc                                                                                     <  1:400105/143‑1 (MQ=255)                                                     tgaCTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTGTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGGTACGGTCTCCt                                                                                   >  1:403984/1‑143 (MQ=255)                                                         tATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCaa                                                                               >  1:789614/1‑142 (MQ=255)                                                         tATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCAATTTGGCTACAGCCGAAGTTACGGTCTCCTTCAc                                                                               >  2:124118/1‑143 (MQ=255)                                                         tATCAGTAATCTATAGAAAATAGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGGGAAGGCCATTACCGACTTACAGTCCGATTTGGCTACAGCCGCAGTTCCGGTCTCCTTCAc                                                                               >  1:369593/1‑143 (MQ=255)                                                          aTCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCAcc                                                                              >  2:181245/1‑143 (MQ=255)                                                           tCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGACTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCa                                                                             >  2:862118/1‑143 (MQ=255)                                                             aGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCGTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCaaa                                                                           <  1:938265/143‑1 (MQ=255)                                                                aaTCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAacac                                                                        <  2:705397/143‑1 (MQ=255)                                                                   cTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACttt                                                                     <  2:684877/143‑1 (MQ=255)                                                                      taGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCt                                                                  >  1:1117680/1‑143 (MQ=255)                                                                       agaagaTTGCGTAACGAATCTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGCAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACTAAACACTTTGCtt                                                                 <  2:1028611/143‑1 (MQ=255)                                                                       aGATAATTGCTTATCGAATATGCTTTTTAGTAATTTTTTGCAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCtt                                                                 <  2:417874/143‑1 (MQ=255)                                                                       aGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCtt                                                                 >  1:408464/1‑143 (MQ=255)                                                                         aaaaTTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTc                                                               >  2:261791/1‑143 (MQ=255)                                                                         aaaaTTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTACACCagagcgtttggtttc                                                               >  1:803850/1‑129 (MQ=255)                                                                           aagtGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAATGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCaa                                                             <  1:580323/140‑1 (MQ=255)                                                                           aaTTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTcca                                                             >  1:259084/1‑141 (MQ=255)                                                                                cGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACCTTGCTTTCAACTTTg                                                        <  2:940858/143‑1 (MQ=255)                                                                                    aCGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGTCCTTCTCACTTAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCa                                                    <  1:140669/143‑1 (MQ=255)                                                                                     cGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAg                                                   >  2:320605/1‑143 (MQ=255)                                                                                     cGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAg                                                   <  1:1010477/143‑1 (MQ=255)                                                                                       aaaCTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTAACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGt                                                 >  1:1066838/1‑143 (MQ=255)                                                                                         aCTGCTTTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAg                                               <  2:111575/143‑1 (MQ=255)                                                                                                 tgaGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCg                                       <  2:1045822/141‑1 (MQ=255)                                                                                                  tAGTAATTTTTTGAAACAATAGTAATTAGGCCTTCTCGCTGAGGAGGCCATTGCCGACTTACAGTTCGAGTTGGCTACAGTCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCgg                                      <  2:1112478/143‑1 (MQ=255)                                                                                                       aTTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTCCGGCCTCCTTCACCAACCACTTTGCTTTCAACTTTGGTCAGGTAGTCCGGTCGGGTTaa                                 >  1:14751/1‑143 (MQ=255)                                                                                                        ttttttGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGATTATAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGTTCAGGTAGTCCAGTCAGGTTCAc                                >  2:731529/1‑143 (MQ=255)                                                                                                             tGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAgcgc                           <  1:547411/143‑1 (MQ=255)                                                                                                             cgAAACAAAACAAATAAGGCCTCCTCACCGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAgcgc                           <  1:650233/142‑1 (MQ=255)                                                                                                               aaaTAATACAAATAAGGCCT‑‑TCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTGCCTCACCAAACACTTTGCTTTCGACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTgg                       <  2:675752/143‑1 (MQ=255)                                                                                                                aaCAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTTCGGTATCCTTCACCAAACACTTTGATTTAAACTTTGGTAAGGTAGTCCAGTCGGGTTAACAGCGCCTg                        >  1:74007/1‑143 (MQ=255)                                                                                                                aaCAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTg                        <  2:230367/143‑1 (MQ=255)                                                                                                                   aaTCCAAATATGGCCCTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTa                     <  2:754044/143‑1 (MQ=255)                                                                                                                   aaTACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGCTTTGGCTACAGCCGAAGTTACGGCCTCCCTCACCAACCACAAAGAATCCAACTTTGGCCAGGCCGTCCACTCGGGCCACCAGCGcccgcta                     >  2:328379/1‑138 (MQ=255)                                                                                                                    ctACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAg                    <  2:712471/142‑1 (MQ=255)                                                                                                                    aTACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAg                    <  1:884910/143‑1 (MQ=255)                                                                                                                      aCAAATGAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGtt                  <  1:878416/143‑1 (MQ=255)                                                                                                                        gaaTAAGGTCTTCTCACTGGGAAGTCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTct                <  2:758825/142‑1 (MQ=255)                                                                                                                           tAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTctgct             <  1:1082987/143‑1 (MQ=255)                                                                                                                            aaGGCCTTCTCACTGAGAGGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTctgctg            <  1:502516/143‑1 (MQ=255)                                                                                                                            aaGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTctgctg            <  1:955171/143‑1 (MQ=255)                                                                                                                             aGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTgg           >  2:43153/1‑143 (MQ=255)                                                                                                                                 cTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGt       >  1:841539/1‑143 (MQ=255)                                                                                                                                   tctcACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCa     <  1:757392/143‑1 (MQ=255)                                                                                                                                      cACTGAGAAGGCTATTACCGACTTACAGTTCGGTTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGAGTTAACGGCGCCTGGTAGTTCTGCTGGAAGTCAGTa  <  2:338494/143‑1 (MQ=255)                                                                                                                                        |                                                                                                                                             CTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTA  >  NC_000913/292167‑292442

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.