New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =10 (0.160)55 (0.970) 45/252 0.2 88.1% coding (290/630 nt) stfP e14 prophage, uncharacterized protein
?NC_000913 1209619 = 6 (0.110)pseudogene (1/501 nt) stfE pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

GGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCA  >  NC_000913/1209480‑1209759
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gatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcatggagttttgctccttctccccaaccacCGtt                                                                                                                                           >  1:193753‑M2/140‑143 (MQ=255)
          cggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtctagctatgaaaccggtgcgtcctaatgtacccgttgctgcatcgggttttgctccttctcccaacacaaCGTTTAAGAAAATg                                                                                                                                 >  1:35602‑M2/130‑143 (MQ=255)
          cggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATg                                                                                                                                 <  1:254649‑M2/14‑1 (MQ=255)
            gcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaa                                                                                                                               <  1:166129‑M2/16‑1 (MQ=255)
             gcAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaag                                                                                                                              <  2:149529/142‑1 (MQ=255)
             gagtccacccccacggaacgatgactgagtgctcaataccaccaatcatcaccgggatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaag                                                                                                                              <  2:753091‑M2/17‑1 (MQ=255)
             cagtccacccccactgaatgattattgattgctcaacaccaccaaccataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttatgctccttctcccaaaccacCGTTTATGAAAATgaag                                                                                                                              <  1:138286‑M2/17‑1 (MQ=255)
                 ccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAAt                                                                                                                          >  2:1056102‑M2/123‑143 (MQ=255)
                      cccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttctgctccttctcccaagccaaCGTTTATGAGAACGAAAAAATAAGaa                                                                                                                     >  1:1007101‑M2/118‑143 (MQ=255)
                               tgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgcgccttctcccaaaccaaCGCTTATGAAAATGTAGAAATAACAAGCAAATGGc                                                                                                            <  2:578873‑M2/35‑1 (MQ=255)
                               tgagtactgattgctgaataccaccaatcataaccggtatagctatgaaaccggtgcgtccttttttttttttggctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGc                                                                                                            <  1:813132‑M2/35‑1 (MQ=255)
                                gattactgattgctcaataccaccaatcatacccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGca                                                                                                           <  1:540675‑M2/36‑1 (MQ=255)
                                  ttactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatc                                                                                                         >  2:347671‑M2/106‑143 (MQ=255)
                                      tgatttctaaataccaaaaatcataaccgatatagctatgaaaccggggcgtcctaatgtagccgttgctgcattgagctttgctccttcccccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                     <  1:360627‑M2/42‑1 (MQ=255)
                                      tgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                     >  2:647476‑M2/102‑143 (MQ=255)
                                      tgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcactgagttttgctccttataggtggtcgtCGGGTATGAAAATGAAGAAATAACAAGCAGATGGCATCATTc                                                                                                     >  1:758718‑M2/102‑143 (MQ=255)
                                        attgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCt                                                                                                   <  2:638330‑M2/44‑1 (MQ=255)
                                         ttgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccagtccaaCGTTTATGAAAATGAAGAAATAACAAGAAAATGGAATCATTCCTg                                                                                                  >  1:367343‑M2/99‑143 (MQ=255)
                                           cGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCt                                                                                                <  1:360380/143‑1 (MQ=255)
                                            ctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCtt                                                                                               >  1:1082777‑M2/96‑143 (MQ=255)
                                             tcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAACTGGCATCATTCCTGCttt                                                                                              >  2:211631‑M2/95‑143 (MQ=255)
                                             tcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCttt                                                                                              >  1:931546‑M2/95‑143 (MQ=255)
                                             tcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTCTATGAAAATGAAGAAATAACAAGCAAATGGCAGCATGCCCGCttt                                                                                              >  1:1079308‑M2/95‑143 (MQ=255)
                                               aataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccacCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCCGCTTTTa                                                                                            >  1:1053436‑M2/93‑143 (MQ=255)
                                               aataccaccaatcataaccggtatagctatgaaaccggtgcatcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTCATGAAAATGAAGAAATAACAACCAAACGACATCAGTCCTGCCTTTa                                                                                            >  2:718611‑M2/93‑143 (MQ=255)
                                                     accaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggg                                                                                      >  1:818770‑M2/87‑143 (MQ=255)
                                                      ccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCCGCTTTTACCAgggg                                                                                     <  2:225311‑M2/58‑1 (MQ=255)
                                                      cATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCATCTCCCAAACCAACGGTTATGAAAATGACGAAACAACAAGCAAATGGCACCATTCCTGCTCTCACCAgggg                                                                                     >  2:662589/1‑143 (MQ=255)
                                                       caatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttcacccaaaccaaCGCTTATGAAAATGAAGAAATAACAAGCAAATGGCATCAATCCTGCTGTTACCAggggg                                                                                    >  2:596822‑M2/85‑143 (MQ=255)
                                                         atcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAt                                                                                  <  1:495732‑M2/61‑1 (MQ=255)
                                                          tcataaccggtatagctatgaaaccggtgcgtcctaatgtagacgttgctgcattgagttttgcaccttctacccaaccaaCGGTTATGAAAATGAAGAAATCACAAGCAAATGGCATCATTACTGCTTTTACcaggaggagt                                                                                 >  2:968461‑M2/82‑141 (MQ=255)
                                                            ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgccttgagttttgctccttctcccacaccaaCGTTTATGAAGATGAAGAAGTAACAAGCAAATGGCATCTTTGCTGCTTTTAGCAGggggaataa                                                                               >  1:77254‑M2/80‑139 (MQ=255)
                                                               accggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaacccaaCGTTAATGAAAATGAAGAAATAACAAGAAAATAGCATCATTCCTGCTATTACAAGGGGGGTTTAACa                                                                            >  1:138152‑M2/77‑143 (MQ=255)
                                                                ccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAt                                                                           <  1:790695‑M2/68‑1 (MQ=255)
                                                                ccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAt                                                                           >  1:791565‑M2/76‑143 (MQ=255)
                                                                   gtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTACCATGCt                                                                        >  2:805843‑M2/73‑143 (MQ=255)
                                                                         gCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                  >  1:33855/1‑143 (MQ=255)
                                                                           atgaaaccggtgagacgccattttgccgttgctgcatggagtgttgctccttctcccaaacctaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGAGGATTTAACATGCTTATTGGCt                                                                <  2:173609‑M2/79‑1 (MQ=255)
                                                                            ggaaaccggtgcgtcctaatgtagccgttgcggcagtgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGTAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTa                                                               <  2:383267‑M2/80‑1 (MQ=255)
                                                                               aaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACAAGGGGGATTTAACATGCTTATTGCCTCTGt                                                            >  2:249936‑M2/61‑143 (MQ=255)
                                                                                accggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTa                                                           >  1:998771‑M2/60‑143 (MQ=255)
                                                                                accggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAGTTAATATGCTTATTGTCTATGTa                                                           >  1:399736‑M2/60‑143 (MQ=255)
                                                                                  cggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcg                                                         >  1:755532‑M2/58‑143 (MQ=255)
                                                                                    gAAGGCCACGGAACCGGGACACCAACGGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCAGCTATAACAAGGGGGAATAAACATGCTTATTGGCTATGTAcgcg                                                       >  1:832993/1‑143 (MQ=255)
                                                                                       cgtcctaatgtagccgttgctgcatggagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTGTGTACGCGTAt                                                    <  2:1064190‑M2/91‑1 (MQ=255)
                                                                                          cctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaa                                                 <  1:127449‑M2/94‑1 (MQ=255)
                                                                                          cctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTACTGGCTATGTACGCGTATcaa                                                 >  2:685182‑M2/50‑143 (MQ=255)
                                                                                          cctaatggagccgttgctgcatggagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaa                                                 <  1:943265‑M2/94‑1 (MQ=255)
                                                                                           ctaatgtagccgttgctgcattgagtcttgctccttctcccataccaaCGTTTAGGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaac                                                <  2:468827‑M2/95‑1 (MQ=255)
                                                                                              atgtagccgttgctgcattgagctttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGGACGCGTATCAACaaa                                             <  2:939267‑M2/98‑1 (MQ=255)
                                                                                                 tagccgttgctgcattgagttttgctccttctcccaaaccacCGTTTATGAAAAGGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGa                                          <  1:1056102‑M2/101‑1 (MQ=255)
                                                                                                   gccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGCAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTATACCAGGGGGATTTAACATGCGTATTGGATATGTACGCGTATGAACACACGAcc                                        >  2:115078‑M2/41‑143 (MQ=255)
                                                                                                   gccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAGATGGCATCATTCCTGCTTTTACCAGGGGGGTTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAcc                                        >  1:400196‑M2/41‑143 (MQ=255)
                                                                                                     cgttgctgcattgacttttgctccttcgcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAg                                      <  1:29546‑M2/105‑1 (MQ=255)
                                                                                                         gcttcattgagttttagtcggtctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTTCTTTTATCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAaca                                  <  2:719534‑M2/109‑1 (MQ=255)
                                                                                                         gctgcattgacttttgcttcttcccccataccaaTGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAaca                                  <  2:127828‑M2/109‑1 (MQ=255)
                                                                                                             cattgagttttgctccttctcccaacccaaCGTTTATGAACATGAAGAAATCACAAGCAAATGGCATCATTCCTGCTTTGACCAGGGAGAATTAACATGCTGCTTAGCTATGTACGCGTATCAACAAATGACcagaacagcga                              >  2:985728‑M2/31‑139 (MQ=255)
                                                                                                              attgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAACGGCATCATTCCTGCGTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAACTGAccagaacaacgat                             >  2:985500‑M2/30‑138 (MQ=255)
                                                                                                               ttgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTAGGAACAAATGACCAGAACACGGATc                            >  1:717107‑M2/29‑143 (MQ=255)
                                                                                                                   aTGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACa                        <  2:33855/143‑1 (MQ=255)
                                                                                                                    tgttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACaa                       <  1:942346‑M2/120‑1 (MQ=255)
                                                                                                                           ctttcgtctaattcAAGGTTTATTAGAATGCAGGAATAGCGAGCGAATGGCATCATTCCTGCTTTGACCAGGGGGATGTAACATGGTTATGGGCGTTGTACGCGTATCAACAGATGACCATAACCCAGACCTACAACGTAATg                <  2:478001/130‑1 (MQ=255)
                                                                                                                            cTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTCCCGGGGGGGTTGACCATCCTTATTGGTTATATAAGAGTAACAAAAAATAACCAGAACACAAATCTACAAGGTAATgc               >  1:41322/1‑143 (MQ=255)
                                                                                                                             ttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGAATTTAACATGCTTATTGGCTATGTAAGCGTATCAACAAATGACCAGAACACAGGTCTACAACGTAATgcg              >  1:702885‑M2/15‑143 (MQ=255)
                                                                                                                                tcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGACATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGATATGTACGCGTATCAACAAATGACCAGGACACAGATATACAACGTAATGCGCTg           >  2:410609‑M2/12‑143 (MQ=255)
                                                                                                                                 cccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTCCGCGTATAAACAAATGAACAGAAAACACATCTACAACGTAATGCGGTGa          >  2:10667‑M2/11‑143 (MQ=255)
                                                                                                                                  ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGaa         >  2:168589‑M2/10‑143 (MQ=255)
                                                                                                                                  ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCCATGTACGCGTATCAACAAATGACCAGAACACAGATCTACACCGTAATGCGctgca         >  1:165724‑M2/10‑141 (MQ=255)
                                                                                                                                  ccaaaccaaCGTTTATGAAAAACAAGGAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATGAACAAATGACCAGGACACAGATCTACAACGTAATGCGCTGaa         >  2:395883‑M2/10‑143 (MQ=255)
                                                                                                                                     aaccaaCGTTTATGAAAATGAATAAATAACAAGCAAATGGCATCATTCCTGCTTTTACAAGGGGGATTGAAAATGCTTATTGGCTATGTACGCGTATCAACAAATGAAACGAACACAGATTTACAACGTCATGCGCTGAAAtg      >  2:678882‑M2/7‑143 (MQ=255)
                                                                                                                                     aaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACtg      <  2:998771‑M2/137‑1 (MQ=255)
                                                                                                                                      accaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACtgt     >  2:13074‑M2/6‑143 (MQ=255)
                                                                                                                                       ccaaCGTTTATGAAAATGAAGAAATAACAAGCGAATGGCATCATTCCTACTAATAACTGAGTGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACtgtg    <  1:932179‑M2/139‑1 (MQ=255)
                                                                                                                                        caaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACACCGTAATGCGCTGAACTGTGc   >  1:824042‑M2/4‑143 (MQ=255)
                                                                                                                                        caaCGTTGATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGc   <  1:647476‑M2/140‑1 (MQ=255)
                                                                                                                                         aaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCa  <  1:382243‑M2/141‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                            
GGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCA  >  NC_000913/1209480‑1209759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.