New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2515612	NA (NA)	67 (1.030)	52/280	0.2	93.2%	intergenic (+171/+29)	insL1/yfeA	IS186 transposase/putative diguanylate cyclase
	?	NC_000913	2536308 =	5 (0.080)					coding (477/510 nt)	crr	glucose‑specific enzyme IIA component of PTS

GAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACT  >  NC_000913/2515475‑2515754                                                                                                                                          |                                                                                                                                               ggtcTTACATGTGCCCATTCGTGGGCCAGTCTCCCTGACCGTCTACAAAACGCAATCGAAGAACGCGAGGCATCGCTCTAACCAGGCACCGAGGCGTCGCATGCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATa                                                                                                                                           <  2:31288/140‑1 (MQ=11) gcgCTTACAGGTGGCCTTGCGTGGCACAGTCTCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATa                                                                                                                                           <  2:181362/141‑1 (MQ=255)  aGCGTACAGGTGGGCATCCGTGGGACAGTAGCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATaa                                                                                                                                          <  1:621559/143‑1 (MQ=9)           gTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAGGAACGCGAGGCATCGTCTTAACGCGGCACCGAGGCGTCGCATTCGTCAGATGGTTCAGCCCCTGATTTAGCCCGTCTGGCATAAtacacaggc                                                                                                                                 >  2:358857/1‑135 (MQ=11)                     gTGGGAGATTATCCCTGACAGCGTACAAAACGCAATTGAATAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGc                                                                                                                       <  2:707963/143‑1 (MQ=255)                     gTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGc                                                                                                                       <  1:722812/143‑1 (MQ=255)                       gggACAGTATCCCTGACAGCCTAGAAGGCGCGATTGAAGCACGCGAGGCATCGTCTTAACGAGGCATCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTGAGTTAGCGCTTATGTGATAATTCCCCGGTTTTTTTACGCCt                                                                                                                     <  2:139778/143‑1 (MQ=14)                         gACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGCTAGCGCTTATGGGATAATTCCCCGGTGTTTTTACGCCTGt                                                                                                                   >  2:263545/1‑143 (MQ=255)                         cacacTATCCCTGACAGCCTACAAACCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGG‑TTTTTTACGCCTGtt                                                                                                                  <  1:1013858/142‑1 (MQ=255)                            aGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTaa                                                                                                                >  2:383797/1‑143 (MQ=255)                            aGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTaa                                                                                                                <  2:383471/143‑1 (MQ=255)                              tATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCACCCCTTAAGTTAGCGCTTATGGGCGAATTCACCGGTTTTTTTCCGCCTGGTGATc                                                                                                              >  2:679063/1‑143 (MQ=14)                                  ccggACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCt                                                                                                          <  2:590925/140‑1 (MQ=255)                                   cTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTGTTACGCCTGTTAATCAGCTa                                                                                                         >  1:383627/1‑143 (MQ=255)                                     gACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTCTTTTACCCCTGTTAATCAGCTAAt                                                                                                       >  2:239392/1‑143 (MQ=255)                                     gACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCGTAACGAGGCACCGAGGCGTCGCATTCTTCAGATTGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTCACGCCTGTTAATCAGCTAAt                                                                                                       <  1:218388/143‑1 (MQ=255)                                       ctcgtcaCAAAACGCTCTTGAAGAACGCGTGTCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTTAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATgg                                                                                                     <  2:389506/137‑1 (MQ=18)                                        aGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTCCGCCTGTTAATCAGCTAATGGc                                                                                                    >  1:487579/1‑143 (MQ=255)                                          ccTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCATCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTg                                                                                                  >  1:1099208/1‑143 (MQ=255)                                           cTACAAAACGCAATTGAATAACGCGAGCCATCATATCATTGAGTTACCGATGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGc                                                                                                 <  2:505581/143‑1 (MQ=18)                                           cTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTGTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGc                                                                                                 >  1:1146417/1‑143 (MQ=255)                                             agagagcGCAGTTGGAGGACGTGATGCGTCGTCGGAACGAGGCAGCGAGGCGTCGCATTCTTCAGATGGTTCAACCGTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTGTACGCCTGTTAATCAGCTAATGGCTGCgg                                                                                               <  2:181588/137‑1 (MQ=18)                                             aCAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCgg                                                                                               >  1:514925/1‑143 (MQ=255)                                                 cgcgtcagtGACGAACGCGAGGCATCGTCTGAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTGACGCCTGTTAATCAGCTAATGGCTGCGGGCGa                                                                                           <  2:602305/135‑1 (MQ=18)                                                 agcGCAATGGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCTGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGa                                                                                           <  2:569884/141‑1 (MQ=255)                                                 aaCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTACTTGCTGCGGGCGa                                                                                           >  2:1135689/1‑143 (MQ=255)                                                   cgcaaagtaggaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATGCTTCAGATGGGTCAACCCTTGAGTTAGCGCTTATGGGATAATTCCCCGGGTTTTTTACGCCTGTTAATCAGCGAATGGCTGCGGGCGAcc                                                                                         <  2:142632/133‑1 (MQ=18)                                                   cGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTCAGTTAGCGCTTATGGGATAATTCCCCGGTCTTTTTACGCCTGCGCATCAGCTAATACCTGCTGGCGAcc                                                                                         >  2:661648/1‑143 (MQ=17)                                                       aTTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCCTACTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTGTTTTACGCCTGTTAATCAGCTCATGGCTGCGTGCGACCaagc                                                                                     >  1:486974/1‑141 (MQ=18)                                                       aTTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATc                                                                                     >  1:675029/1‑143 (MQ=255)                                                       aTTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATc                                                                                     >  1:987940/1‑143 (MQ=255)                                                              aaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATAcc                                                                              <  1:1117258/143‑1 (MQ=255)                                                                ctcgAGGCATCGTCTTAACGTGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTGATGGCTGCGGGCGACCAATCAAATACCCt                                                                            <  2:278484/141‑1 (MQ=255)                                                                cgcgAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCGCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCt                                                                            >  1:697886/1‑143 (MQ=255)                                                                 gcgAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTATGCCTGTTGATCGGCTACTGGGTACAGGTGACCAATctgatgtcctt                                                                           >  2:891642/1‑133 (MQ=17)                                                                 gcgAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCtt                                                                           >  1:413419/1‑143 (MQ=255)                                                                 gcgAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCtt                                                                           >  1:1021879/1‑143 (MQ=255)                                                                 gcgAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCACTTATGGGATAATTCCCCGGTTCTTTTACGCCTGTTAATCAGCTACTGGCGGCGGGCGACCAATCAATAACCCtt                                                                           >  2:606756/1‑143 (MQ=21)                                                                    aGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAATTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTACTCAGCTCATGGCTGCGGGCGCCCAGTCACATACCCTTGCa                                                                        >  2:570881/1‑143 (MQ=21)                                                                       cATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGat                                                                     >  1:815184/1‑143 (MQ=255)                                                                         tCGTCTTAATGAGGTACCGACGCGTCGCATTCTTCACATGGTTCGAACCTTAATTTTTCGCTTATGGGATAATTCCCCGGTTTTTTCAATCCTCTTAATCAGCTAATCGCTGCGGGCGACCAATCAAATACCCTTTCAGatat                                                                   <  2:996993/143‑1 (MQ=255)                                                                          cggcgtAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATACCTCCCCGGGTTTTTTACGTCTGTTAATCAGCTAATGGCTGCGGGCGTCCAAGCAAATACCCTTGCAGATAtt                                                                  <  1:107170/138‑1 (MQ=21)                                                                          cGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTACTGGCTGCGGGCGACCAATCAAATACACTTGCAGatata                                                                  >  2:677945/1‑142 (MQ=255)                                                                            tCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCGGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGc                                                                >  2:196367/1‑143 (MQ=255)                                                                                aaCGAGGCCCCGAGTCGTCGCATTCTTCAGATGGTTCATCCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCAccc                                                            <  2:914640/143‑1 (MQ=255)                                                                                  cgcggCACCGTGGCGGCGCATTCTTGAGATGGTTCAACCCTTGAGTTAGCGCTTATGGGATAATTCCCCGGGTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCg                                                          <  2:1014771/140‑1 (MQ=255)                                                                                   gAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAAACCTTAAGTTAGAGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAACTACCCTTGCAGATATTGCCCCCCgc                                                         >  1:319094/1‑142 (MQ=255)                                                                                        aCCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATCCCCTTCCAGATATTGCCCCCCGAGCTTa                                                    >  2:46717/1‑143 (MQ=255)                                                                                          cGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCTGCCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATg                                                  <  2:193066/143‑1 (MQ=255)                                                                                          cGAGGCGGCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGGGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATg                                                  <  1:1065002/143‑1 (MQ=255)                                                                                              gCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCCCCCCGAACTCATGCact                                              >  2:154148/1‑141 (MQ=255)                                                                                               cgccGCATTCTTCCAATGGTTCAACCCTTAAGTTAGCGCTCATGGGATCATTCCCCGGTTTTTTTACGCCTCTTGAGCCGCTAATGGCTGCGGGCGACCAATCAAATACCCATGCAGATATTGCACCCCGAGCTTATGCAATa                                             <  2:347070/140‑1 (MQ=37)                                                                                                 tCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAgc                                           <  1:196367/143‑1 (MQ=255)                                                                                                    cATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGcc                                        <  2:1021879/143‑1 (MQ=255)                                                                                                    cATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGcc                                        >  1:694314/1‑143 (MQ=255)                                                                                                    cATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGcc                                        <  2:413419/143‑1 (MQ=255)                                                                                                         ttcAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCctgctg                                   >  1:1128375/1‑143 (MQ=255)                                                                                                         ttcAGATGGCTCAACCCTTGAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCctgctg                                   <  2:631867/143‑1 (MQ=255)                                                                                                          tcAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGGTAATCAGCTAATGGCTGCGGGCGACCACTCAAATACCCTTGCCGATATTGCACCCCGCGCTTATGCAATAGCGCctggtgc                                  >  2:135722/1‑143 (MQ=39)                                                                                                            aGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCctgctgctg                                >  1:435063/1‑143 (MQ=255)                                                                                                            aGATGGTTCAACCCTTAAGTTAGCGCTTAGGGGACCACACCCCCACACTTTTACGCCTGTTAATCACCAAATACCCACCCCCCTCCAAACAAAAACCCCCGCAAAAAACCCACCCCCAGCCAACGCAATAGCGCctgctgctg                                >  2:565404/1‑143 (MQ=2)                                                                                                              aTGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGtt                              <  2:147348/143‑1 (MQ=255)                                                                                                                ggTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATAACCTTGTAGATATTGCACCCCGCGCTTATGCAATAGCGCCtgttgctgttgc                            >  2:115414/1‑143 (MQ=255)                                                                                                                  ttCAACCCTTAAGTTAGCGCTTATGGGCTAATTCCCCGGTTTTTTTCCGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCACTAGCGCCTGCTGCTGTTGCGt                          >  1:57918/1‑143 (MQ=255)                                                                                                                    cAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGtct                        <  1:678367/143‑1 (MQ=255)                                                                                                                     aaCCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCAGTTAATCAGCTAATGGCTGCGGGCGACCAATAAAATACCCTTGCAGATCTTGGACCCCGAGCTTATGCAATAGCGCCGGCTGCTGTTGGGtctc                       >  1:244517/1‑143 (MQ=255)                                                                                                                      aCCCTTAAGTTAGCGCTTATGGGATAATTCCCCGTTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCg                      <  1:424072/143‑1 (MQ=255)                                                                                                                        ccTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGAc                    >  1:57385/1‑143 (MQ=255)                                                                                                                         cTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCACTCAAATACCCTTGCAGATATTGCACCGCGAGCTTATGCAATTGCGCCTGCTGCTGTTGTGtctggcca                   >  2:1061476/1‑138 (MQ=255)                                                                                                                         cTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAACTAATGGCTGCGCGCGACCACTCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGGCTCGACa                   >  1:660561/1‑143 (MQ=255)                                                                                                                            aaGTAAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAAc                <  1:862573/143‑1 (MQ=255)                                                                                                                               ttAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTcc             >  2:117685/1‑143 (MQ=255)                                                                                                                                 aGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGCTATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCcgc           <  1:1027808/143‑1 (MQ=255)                                                                                                                                   cgcTTATGGGATACTTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGAGATTGCACCCCGTGCTTAAGCAATATCTCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGa         <  1:790581/143‑1 (MQ=255)                                                                                                                                         ggggATAATTCCCCGGTTTTTTTACGCCTGTTAAGCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCacac   <  2:343784/142‑1 (MQ=255)                                                                                                                                          gggATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACt  <  2:675029/143‑1 (MQ=255)                                                                                                                                          |                                                                                                                                               GAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACT  >  NC_000913/2515475‑2515754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.