New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 1856323 = | 70 (1.060) | 4 (0.070) | 4/264 | 9.2 | 6.0% | coding (606/948 nt) | ydjH | putative kinase |
? | NC_000913 | 1856345 = | 60 (0.980) | coding (584/948 nt) | ydjH | putative kinase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
CATCGTCATGTCACCACGCTTGATAAAGCAGCCGTCTTTACCCGTTTTAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGCACAGATAATCATCTGCCGGGCTTTAGCTTGCGTAAAAATTTCTGTTAGCGCTTTACCATCCA > NC_000913/1856203‑1856486 | cctCGTCATGTCACCACGCTTGATAAAGCAGCCGTCTTTACCCGTTTTAACCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAg < 2:882329/141‑1 (MQ=255) aTGTCACCACGCTTGATAAAGCAGCCGTCTTTACCCGTTTTAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAg > 1:1118379/1‑143 (MQ=255) gTCACCACGCTTGATAAAGCAGCCGTCTTTACCCGTTTTAATCACAACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGAAAAATTAGGAAACAGAt > 1:221503/1‑143 (MQ=255) gTCACCACGCTTGATAAAGCAGCCGACTGTACCCGATTTAATCACCACCGTTTTTACGCCACCCGCAAGAAAGAAGTCAGCAACTTCATCCAGTGTCACTTACACGATGGGTAACTCTGCCCCGGCACAAATAGGAAACAGac > 2:184283/1‑142 (MQ=255) accacGCTTGATAAAGCAGCCGTCTTTACCCGTTTTAATCACCACCGTTTTTACGCCGCACGCAAGAAAGAAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAAt > 2:789452/1‑143 (MQ=255) ttGATAAAGCAGCCGTCTTTACCCGTTTTAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAAAAGATAATCGACATa > 1:380879/1‑143 (MQ=255) aTAAAGCAGCCGTCTTTACCCGTTTTAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCGAAATTAGGAAACAGATAATCGACATAACt > 1:983944/1‑143 (MQ=255) cagcCGTCTTTACCCGTTTTAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCAAGTCCGTCTTTCCCGGTGAGTACTTTTGCCTCGGCACAATTAGGAACCAGATGATCGACATAACTCAATGc > 1:898411/1‑143 (MQ=255) cagcCGGCTTTACCCGTTTTAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCGAGTGTCTCTGTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGc < 2:743224/143‑1 (MQ=255) cagcCCTCTTTACCCGTTTTAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGc < 1:177318/143‑1 (MQ=255) ccGTCTTTACCCGTTTTAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGTCTCGGCCAAAGTAGGAAACAGATAGTCGACATAACTCAGTGCTTc > 1:977469/1‑143 (MQ=255) cgtcgtTACCCGTTTTAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATGGCATCCAGTGTCCCTTTCCCGGTGAGTAAGTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCg < 1:762544/143‑1 (MQ=255) cGTGTTTACCCGTTTTAATCCCCACCGTTTTTCCGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTGCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCg < 2:150735/143‑1 (MQ=255) cGTCTTTACCCGATTTAATCCCCTCCTTTTTTACGCCACACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCg < 1:209553/143‑1 (MQ=255) gTCTTTACCCGTTTTAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGc > 1:312220/1‑143 (MQ=255) tttACCCGTTTTAATCAGCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATGAGGACACAGATAATCGACATACCTCAATGCTCCGCaaa > 2:193745/1‑143 (MQ=255) ttctcccttttAACCTCCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGTTTAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAat < 1:164449/136‑1 (MQ=255) ttACCCGTTTTAATCACCACCGTTTTTACGCCGCACGCCAGAAAGCAGTCAACAATTTCATCTAGTGTCAATATTCCGGATAGTAATTATGCCTCAGAACAACCAGGAACCAGATAATCGACATAACACACAGCTTCGCAAat > 2:136815/1‑143 (MQ=255) ttACCCGTTTTAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCACAAat > 1:730817/1‑143 (MQ=255) ccGTTTTAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCTAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATatca > 1:784421/1‑143 (MQ=255) ccGTTTTAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCTACATAACTCAATGCTTCGCAAATatca > 1:574865/1‑143 (MQ=255) ccGTTTTAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATatca > 1:70149/1‑143 (MQ=255) ccGTTTTAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCACTGTCTCTTTCCCGGTGAGTACTTTTGCCTCGGCAAAATTAGGAAACCGATAATCGACATCACTCAATGACTCGCCACTatca > 2:334226/1‑143 (MQ=255) ccGTTTTAATCACCACCGTTTTTACCCCGCACGCAAGACAGCAGCCAGCAATTTCATCCAGTGTCTGTTTCCGCGCGAGCCACTTTGCCTAGGCAACATTACGCAAGAGCTACTTCACCGCACTCAATGCTTCGCAAATatcc > 2:1061648/1‑142 (MQ=255) gtgttgaTCACCACCGTTTTTACGCCGCACGCAAGACAGCAGTCAGCAGTTTCATCCAGTGTCTCTTTCCCGGTGAGTTATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATatcatc < 2:1067381/137‑1 (MQ=255) ttttAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATcc < 2:602937/143‑1 (MQ=255) tttaccgaccgcggTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCTGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCa < 2:679619/130‑1 (MQ=255) tttAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCa < 1:1029105/143‑1 (MQ=255) ctcgccaccGGTCTTACGCCGCCCTTCTGAAAGCAGTCATCTATTTCATCCACTGTCTCTTTCCCGGTGAGCAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGt < 2:1015023/139‑1 (MQ=255) accaccGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTAATCCAGTGTCTCTTTGCCGGAGAGTAATTTTGCCTCGGCAAAATTAGGCAACAGATAACAGCCATAACTCAATGCTTCGCAAatatagcactgtggttc > 2:176381/1‑130 (MQ=255) ccaccGTTGTGACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATGTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTttca < 2:346171/143‑1 (MQ=255) caccGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTctcat > 2:521462/1‑143 (MQ=255) tttttACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAAc > 1:918905/1‑143 (MQ=255) tACGCCGCACGCAAGAAAGCAGTCAGCAACTCCACCCAGCGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAACCAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACcgcg < 1:631318/143‑1 (MQ=255) cgacgcacggaAGAAAGCAGTCAGCAAGTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGt < 1:11333/140‑1 (MQ=255) gccgcACGCAAGAAAGCAGTCAGCAATTTCTTACAATGTCTCATTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGTAACAGATGATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCCACCGCGGtt > 1:411912/1‑143 (MQ=255) cgcacgcaAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTg > 1:475755/1‑143 (MQ=255) cgcacgcaAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTg > 2:1133704/1‑143 (MQ=255) aacgcaCGACAGCAGTTAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGAt < 2:933022/142‑1 (MQ=255) gcaAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCat > 1:330080/1‑143 (MQ=255) aaGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCCAAAGCGGGCGGATCatat > 1:711807/1‑143 (MQ=255) aaGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGAGAGTAATTTTGCGTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATAATCCAGCGTTTCATTCAACCGCGGCTTGAGCatat > 1:127300/1‑143 (MQ=255) aGCAGGCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGca < 1:556639/143‑1 (MQ=255) gctttCAGCAATTTCATCCAGTGTTTCTTCCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGcac < 2:739988/139‑1 (MQ=255) gcaggcagCTATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAAGCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGcac < 2:50388/143‑1 (MQ=255) aGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACAGCGGTTTGATCATAACCGCCCAg > 2:269378/1‑143 (MQ=255) aGTCAGCAATTTCATCCAGTGTCTCTTTCCCGCTGAGTAATTTGCCCTCCGCAAAACTCGGCAACAGATAACCGACATAACTCAACGCTTCGCAACAATCATCCAGCGATTCATTCAACCGCCGCCTGATCACACCGacaccg > 2:465198/1‑141 (MQ=255) tCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCACATATCATCCAGCGGTTCCCTCACCCGCGGCTTGATCCTCTCACCACAgct > 1:946980/1‑141 (MQ=255) aGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACCTACCTCAATGCTTCGCAAAGATCACCCAGCGTTTCATTCAACACCGCCTTGGTCATAGCGGcacccatac > 2:496337/1‑137 (MQ=255) aTCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGCACAGCTAATCATCTGcc > 1:353261/1‑143 (MQ=255) gcctctTTCCCGGCGAGTAATGTTCCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGCACAGATAATCATCTGCCGGGCttt < 1:901507/141‑1 (MQ=255) tctTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGCACAGATAATCATCTGCCGGGCTTCAGc > 1:446096/1‑143 (MQ=255) tttCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGCACAGATAATCATCTGCCGGGCTTTAGCtt < 1:878993/143‑1 (MQ=255) tCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGCACAGATAATCATCTGCCGGGCTTTAGCTTGc > 1:1116105/1‑143 (MQ=255) tCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTAGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGCACAGATAATCATCTGCCGGGCTTTAGCTTGc > 1:47887/1‑143 (MQ=255) ccGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGCACAGATAATCATCTGCCGGGCTTTAGCTTGCGt < 1:965826/143‑1 (MQ=255) tAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGCACAGATCATCATCTGCCGGGCTTTAGCTTGCGGAAAAAtgt > 1:293330/1‑141 (MQ=255) aTTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGCACAGATAATCATCTGCCGGGCTTTAGCTTGCGTAAAAATTTCt < 2:1613/143‑1 (MQ=255) aTTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGCACAGATAATCATCTGCCGGGCTTTAGCTTGCGTAAAAATTTCt < 2:1092505/143‑1 (MQ=255) ttGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGCACAGATAATCATCTGCCGGGCTTTAGCTTGCGGAAAAATTTCTGtt > 1:558939/1‑143 (MQ=255) aaTTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTAATCATATCGGCACAAATAATCATCTGCCGGGCTTTACCTTGCCTAAAAAATTCTGTTAGCGCTTTACCa > 2:314972/1‑143 (MQ=255) ttAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGCACAGATAATCATCTGCCGGGCTTTAGCTTGCGTAAAAATTTCTGTTAGCGCTTTACCATc < 1:397193/143‑1 (MQ=255) ttAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGCACAGATAATCATCTGCCGGGCTTTAGCTTGCGTAAAAATTTCTGTTAGCGCTTTACCATc < 1:242399/143‑1 (MQ=255) aGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGCACAGATAATCATCTGCCGGGCTTTAGCTTGCGTAAAAATTTCTGTTAGCGCTTTACCATCCa > 1:126688/1‑143 (MQ=255) | CATCGTCATGTCACCACGCTTGATAAAGCAGCCGTCTTTACCCGTTTTAATCACCACCGTTTTTACGCCGCACGCAAGAAAGCAGTCAGCAATTTCATCCAGTGTCTCTTTCCCGGTGAGTAATTTTGCCTCGGCAAAATTAGGAAACAGATAATCGACATAACTCAATGCTTCGCAAATATCATCCAGCGTTTCATTCAACCGCGGTTTGATCATATCGGCACAGATAATCATCTGCCGGGCTTTAGCTTGCGTAAAAATTTCTGTTAGCGCTTTACCATCCA > NC_000913/1856203‑1856486 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |