BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4295831 =	NA (NA)	4 (0.080)	3/206	8.2	NA	intergenic (+38/+606)	gltP/yjcO	glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein
*	?	NC_000913	= 4296395	NA (NA)	4 (0.080)	3/206	8.2	NA	noncoding (562/602 nt)	RIP321 (repetitive extragenic palindromic) element, contains 11 REP sequences and 4 IHF sites	RIP321 (repetitive extragenic palindromic) element, contains 11 REP sequences and 4 IHF sites
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 103 total aligned reads displayed.

TTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCG  >  NC_000913/4296263‑4296536

tttATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATACGGCGTTTACGCCTCCTCCGACCTCCATGCCTgct                                                                                                                                     >  1:896889/1‑141 (MQ=11)

gttATGCCGCATCCGACATCAACGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGAt                                                                                                                                     <  2:477836/142‑1 (MQ=17)

         cATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCtt                                                                                                                            <  1:678523/143‑1 (MQ=32)

              gACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATCGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCCTCCGACATCACTGCCTGATGCGACGCTTGCcgc                                                                                                                       >  1:1053641/1‑143 (MQ=12)

                   cAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATg                                                                                                                                    >  2:643408/1‑125 (MQ=32)

                   cAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACACCAGACAGCGCAATAGCCTGATTTCGCGTGTTTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACACCAGTGCCTGATGCGACGCTTGCCGCGTCtt                                                                                                                  >  1:970633/1‑143 (MQ=11)

                    aaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCtt                                                                                                                            <  1:295657/132‑1 (MQ=32)

                    aaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGCCTTa                                                                                                                 >  2:717799/1‑143 (MQ=17)

                       gCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCAAGACAGCGCACTAGCCTGATTTTGCGTGATTTTGTAGGTTGGATAAGGCGTTTACGCAGTATCAGACATAAATGCCTGATGCGACGCTTGCCGCGTCGTATCa                                                                                                              >  1:243236/1‑143 (MQ=11)

                         cTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTCTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGCTGCGACGCGTGCCGCGCCATAACAgg                                                                                                            >  2:910331/1‑143 (MQ=11)

                          tGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc                                                                                                           >  2:770178/1‑143 (MQ=32)

                           gATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGc                                                                                                                                          <  2:57790/111‑1 (MQ=32)

                            aTGCGACGCTTAACGCGTCTTATCAGGCCTACGACAGCCTGCCCCATTACCCAAAATAGCGGTGTTTTGAGCAACGCAAAAAACGATTACGCCGCATCCGAAAACACTTCCTGATTCGACGCTTGCCGCGTCTTATCAGGCCt                                                                                                         >  1:1148758/1‑143 (MQ=2)

                              gCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATCTTGTAGGTCGGATAAGGCGTTTCCGCCGCATCCGACATCAATGCCTGATGCGACACTTTCCGCGTCTCATCAGGCCTAt                                                                                                       >  2:1142657/1‑143 (MQ=11)

                               cGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTCTCAGGCCTATc                                                                                                      >  1:126091/1‑143 (MQ=18)

                                gACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGACGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCt                                                                                                     >  2:47902/1‑143 (MQ=21)

                                gACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCCCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTCACCACGCCTATCt                                                                                                     >  2:1031004/1‑143 (MQ=255)

                                   gCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTaa                                                                                                  >  1:645585/1‑143 (MQ=37)

                                     ttgccgcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAAt                                                                                                                                            <  2:695223/95‑1 (MQ=14)

                                           cgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCGTCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGt                                                                                          >  1:584499/1‑143 (MQ=255)

                                           cgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGt                                                                                          <  2:113934/143‑1 (MQ=255)

                                           cgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGCGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTCATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGt                                                                                          <  2:108155/143‑1 (MQ=255)

                                             tCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAAt                                                                                                                                            <  2:619705/91‑1 (MQ=31)

                                              cTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATGTTGTAGGTCGGATAAGGCGTGTACGCCGCATCCGACATCAATGCCTGATGCGACGCGTGCCGCGTCTTATCACGCCTATCTTaagcttcgctcaa                                                                                       >  2:850673/1‑132 (MQ=11)

                                               ttATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCa                                                                                                              <  1:681790/119‑1 (MQ=33)

                                                tATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAtt                                                                                     <  1:269721/143‑1 (MQ=255)

                                                gacaaGGCCGCCGCCGGACAGCGCAATAGCCTGATTGGGCGTGATCTTGGAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGGGACGCTGGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAtt                                                                                     <  1:773064/139‑1 (MQ=17)

                                                 aTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACCTCAACCGGCGGCTAAtct                                                                                    >  2:615362/1‑141 (MQ=11)

                                                 aTCACGCCTGCGCCAGACAGCGCAATAGCCTGAGTGAGCGTGATTTGGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAttt                                                                                    <  1:351057/143‑1 (MQ=17)

                                                   cAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGGTGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAttttt                                                                                  <  1:976762/143‑1 (MQ=255)

                                                    aGGCCTACGGCAGACCGCGCAATAGCCTGATTTGGCGTGATTCTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTc                                                                                 <  2:810355/143‑1 (MQ=255)

                                                    aGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGGTAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTc                                                                                 >  1:858533/1‑143 (MQ=255)

                                                    aGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGAt                                                                                                                                     >  2:734510/1‑91 (MQ=33)

                                                    aGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGAt                                                                                                                                     <  1:734510/91‑1 (MQ=34)

                                                     ggCCTACGCCAGACAGCGCAATAGCCTGATGTAGCGAGATTCACAAAAACGAGTAAGGCGTTTACGCCTCATCCGACACCAGCGCCAGATACGACGCATGCCGCGTCTTATCAGGCCTATCTTAAGCGTTGGTTGATTTTTCa                                                                                >  2:465500/1‑143 (MQ=9)

                                                      gCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTa                                                                                                                 <  1:707951/109‑1 (MQ=33)

                                                      gCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTa                                                                                                                 >  2:707951/1‑109 (MQ=33)

                                                      gCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCaa                                                                               <  1:182060/143‑1 (MQ=255)

                                                      gCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCaa                                                                               >  2:411705/1‑143 (MQ=255)

                                                      gCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCAGATAAGGCGTTTACGCCACATCCGACATCCATGCCTGATGCGCCGATTGTCGCGTCTCCTGACGCCTACGTTAAACGTTGGATAAtgtctcga                                                                               >  1:783483/1‑136 (MQ=11)

                                                       cctccaccggACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTCTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCaaa                                                                              <  2:213169/134‑1 (MQ=255)

                                                       ccTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCaaa                                                                              <  1:615362/143‑1 (MQ=255)

                                                       ccTAAGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCaaa                                                                              <  1:30790/143‑1 (MQ=255)

                                                        cTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAc                                                                             <  1:1093868/143‑1 (MQ=255)

                                                        cTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAc                                                                             >  1:998168/1‑143 (MQ=255)

                                                           cGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAActct                                                                          >  1:1025086/1‑143 (MQ=255)

                                                            gCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAatcct                                                                         >  2:61084/1‑141 (MQ=255)

                                                            gCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCtt                                                                         <  1:461179/143‑1 (MQ=255)

                                                              cAGACACCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTca                                                                       <  1:61734/143‑1 (MQ=255)

                                                                gACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCcgc                                                                                                                       >  2:491380/1‑93 (MQ=18)

                                                                gACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCcgc                                                                                                                       <  1:491380/93‑1 (MQ=34)

                                                                gACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTcaca                                                                     <  1:455209/143‑1 (MQ=255)

                                                                 aCAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCCTCAATGCCTGATGCGACGCTTGCCGCGTCTTATAAGGCCTATCTTAACCGTTGGTTCATTTTTCAAACTCTCCacac                                                                    >  2:76939/1‑143 (MQ=18)

                                                                   aGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACAccc                                                                  >  1:361655/1‑143 (MQ=255)

                                                                          tAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCa                                                           >  1:1045116/1‑143 (MQ=255)

                                                                             ccTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAAc                                                        <  1:1110748/143‑1 (MQ=255)

                                                                             ccTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGACGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGCTAATTTTTCACACTCTTCACCCCCGGTATCaaag                                                        >  2:522375/1‑142 (MQ=255)

                                                                             ccTGATTTAGCGTGATTTTGTAGGACGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCGGCGTCTTATCAGGCCTATCTTAACCGCTGGTCAGTCTCTCAAACCCTTCACACTCAGCATCAAAc                                                        >  1:3568/1‑143 (MQ=17)

                                                                              cTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGTCGCTTGCCGCGTGTTTTCTTGCTTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCCGTATCAAAcc                                                       >  1:565388/1‑143 (MQ=21)

                                                                                   ttAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCGTACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTcc                                                  <  1:649037/143‑1 (MQ=255)

                                                                                       cGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc                                                                                                           <  2:133762/82‑1 (MQ=33)

                                                                                        gTGATTTTGTAGGTCGGATAAGGCGTTTAAGCCGCATCCGACATCAATGCCTGATGGGCCGCGTGCCGAGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTGTTCAAACTCTTCACCCCCGGCACCACACCCTTCCATAcg                                             >  2:640533/1‑142 (MQ=21)

                                                                                         tgtttttGTAGGTCGGATAGGGCGTTCAGGTCGCGTCCTACATCTATGCTTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAATCTCTTCACACCCGGTATCAAACCCTTCCATACAg                                            <  2:11005/140‑1 (MQ=25)

                                                                                              ttGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAg                                       <  2:1025086/143‑1 (MQ=255)

                                                                                               tGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAAGCCTTCCATACAGCCCAgg                                      >  2:1012036/1‑143 (MQ=255)

                                                                                                  aGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTc                                   <  1:175422/143‑1 (MQ=255)

                                                                                                   ggTCGGATAAGGCGTTTACGCCGCCTCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCa                                  >  2:979915/1‑143 (MQ=255)

                                                                                                    gTCGGATATGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACTCCCGGTATCAAACCCTTCCATACAGCTCAGGTTCaa                                 <  1:746487/143‑1 (MQ=255)

                                                                                                    gTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTaa                                                                                                  <  1:981765/78‑1 (MQ=21)

                                                                                                     tCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAAc                                >  1:1024847/1‑143 (MQ=255)

                                                                                                     tCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAAc                                <  1:1078445/143‑1 (MQ=255)

                                                                                                     gcGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAAc                                >  2:416498/2‑143 (MQ=255)

                                                                                                       ggATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCCTACAGCTCAAGTTCAAccc                              >  2:229118/1‑142 (MQ=255)

                                                                                                       ggATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCa                              <  2:227630/143‑1 (MQ=255)

                                                                                                        gATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGc                                                                                                                          <  2:14602/50‑1 (MQ=38)

                                                                                                         aTAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAACCTCTTCACACTCGGTATCACACCCTTCCTTTCTGCTCATGTTCaagtagt                            >  1:479882/1‑138 (MQ=21)

                                                                                                           aaGGCGTTTACGCCGCATCCGACCTCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAACCTCTTCACACACGGTATCAAACCCTCCCATACAGCTCCCGCTCAAcccatgc                          >  2:666504/1‑138 (MQ=25)

                                                                                                           aaGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGc                          <  1:770178/143‑1 (MQ=255)

                                                                                                              gCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCCACCAGTGCAgc                       >  1:1002000/1‑143 (MQ=255)

                                                                                                               cGTTTACGCCGCATCCGACATCAATGCCTGCTGCGAAGATAGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAgcg                      >  1:1095197/1‑143 (MQ=255)

                                                                                                               cGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTTCCGCGTCTTATCAGGACTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAgcg                      <  1:170529/143‑1 (MQ=255)

                                                                                                                gTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTATTCACACCCGGTATCAAACCCTTCCCTACAGCTCAGGGACAACCAGTGCAacga                     >  2:1146830/1‑142 (MQ=37)

                                                                                                                gTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAAACGTTGGTTAATTTTTCGAACTCTTCACACCCGGTCTCAACCCCTTCCATACAGGTTAGGTTCAACCAGTCCAggcg                     >  1:735165/1‑140 (MQ=25)

                                                                                                                   tACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCtt                  >  1:573507/1‑143 (MQ=255)

                                                                                                                    aCGCCGCATCCGACATCAATGCCTGATGCGACTCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCttt                 >  1:1153688/1‑143 (MQ=255)

                                                                                                                    aCGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCGCACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCttt                 <  1:599877/143‑1 (MQ=255)

                                                                                                                    aCGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCttt                 <  2:387437/143‑1 (MQ=255)

                                                                                                                    aCGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGCCTTATCAGACCTATCTTAACCGCTGGCTAACTTTTCACACTCTTCACACCCGGTATCAAACCCTTCCCTACAGCTCATCTTCACCCCGTGCAGCGCCttt                 >  2:147548/1‑143 (MQ=25)

                                                                                                                       ccgcATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGc              <  1:343309/143‑1 (MQ=255)

                                                                                                                         gcATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCtt            <  2:171992/143‑1 (MQ=255)

                                                                                                                         gcATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGGTGGTTAATTCTTCACACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGAATCAACCAGTGCAGCACCTTTTACtt            >  1:564245/1‑143 (MQ=37)

                                                                                                                          cATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTg           <  1:922843/143‑1 (MQ=255)

                                                                                                                             ccGACATCCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGttc        <  2:846484/143‑1 (MQ=255)

                                                                                                                               gACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGttctt      <  2:900723/143‑1 (MQ=255)

                                                                                                                                aCATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGttcttc     <  2:361655/143‑1 (MQ=255)

                                                                                                                                 cATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTtcttct    >  1:961553/1‑143 (MQ=255)

                                                                                                                                  aTCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTATCCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACCGCTCAGGTTCAACCATTGCAGCGCCTTTTGCTTGTTCTtctc   <  2:140195/143‑1 (MQ=255)

                                                                                                                                  aTCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTtctc   <  1:934122/143‑1 (MQ=255)

                                                                                                                                   tCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCATCGCCTTTTGCTTGTTCTtctcc  >  1:733408/1‑142 (MQ=255)

                                                                                                                                   tCAATGCCTGATGCGACGCTTGCCGCGGCTGATCAGACCTATCTTAACGGTTGGTTGAGTGTTCAAACTCTTCACACCCGGTATCAAACCGTTCCATACAGCTCACGTTCAACCAGTACAACGCCTTCTGCtcgctcgtccta  >  2:850678/1‑132 (MQ=255)

TTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCG  >  NC_000913/4296263‑4296536

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.