New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =7 (0.160)38 (0.960) 31/252 0.2 86.2% coding (290/630 nt) stfP e14 prophage, uncharacterized protein
?NC_000913 1209619 = 6 (0.150)pseudogene (1/501 nt) stfE pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

Only 100 of 106 total aligned reads displayed.

TGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCC  >  NC_000913/1207649‑1207932
                                                                                                                                             |                                                                                                                                              
tgcacagttcagcgcagtacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgtt                                                                                                                                               >  2:444230‑M1/142‑143 (MQ=255)
   tggtgacctccggtgccAGCCTGGAGATGGGGCGGCACGGCCAGTTACTTACCGCACTGCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGT                                                                                                                                            <  2:242881‑M1/135‑1 (MQ=255)
   tggAGGCTTCCTGTGCCAGCCTGGTGACGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAGGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGT                                                                                                                                            <  2:247135‑M1/143‑1 (MQ=255)
   acagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGt                                                                                                                                            <  2:693996‑M1/5‑1 (MQ=255)
      aGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTCGGTTTG                                                                                                                                         >  1:746774‑M1/1‑143 (MQ=255)
       ttcagcgcattacgttgtagaaaagtgttctgggcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttgttcattttcataaacgTTGGTTTgg                                                                                                                                        <  2:684602‑M1/9‑1 (MQ=255)
       ggCATCCGGTGCCAGCCTGGAGAAGGTGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGACTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGG                                                                                                                                        <  2:738851‑M1/143‑1 (MQ=255)
        tcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTggg                                                                                                                                       >  1:122718‑M1/134‑143 (MQ=255)
         gagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtaaagagccaataagcatgttagatccgcctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGga                                                                                                                                      >  2:473838‑M1/133‑143 (MQ=255)
         cagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccttggtgggcgcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGga                                                                                                                                      <  1:177928‑M1/11‑1 (MQ=255)
             gcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAg                                                                                                                                  >  1:535609‑M1/129‑143 (MQ=255)
             gcagtacgtgatagctctgtgttcggttcatttgttgatacgcgtacatagccaataagcatgttcaatgggcctattaaaagcaggaataatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAg                                                                                                                                  >  2:275486‑M1/129‑143 (MQ=255)
              cattacgttgtaggtctgggttctggtcatttgttgataagcgtacatagccaataagcatgttaaatccccctggtacaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAgg                                                                                                                                 >  1:674917‑M1/128‑143 (MQ=255)
               tttgctttgtagatctgtgttctgttcatttgttgataagcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGa                                                                                                                                >  1:138263‑M1/127‑143 (MQ=255)
               gTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGGTTGGGGGCAGGc                                                                                                                                >  1:369053‑M1/1‑142 (MQ=255)
               attatgttgtagatctgtgttttggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGa                                                                                                                                >  1:409620‑M1/127‑143 (MQ=255)
                      ccTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcat                                                                                                                         <  2:696147‑M1/143‑9 (MQ=255)
                         ggAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattac                                                                                                                      <  1:502315‑M1/143‑12 (MQ=255)
                             ctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccatggaacaaataggaatgataccatatgattgttatttcttcattttcataaacgTTGGCTCAGGAGTAGGCGCAACACTCAATgc                                                                                                                  <  2:722186‑M1/31‑1 (MQ=255)
                              aGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCGGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                 <  1:378629/143‑1 (MQ=255)
                               gtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattctcataaacgTTGGTGTGGGACGAGGAGCAAACTTGAATgcag                                                                                                                <  1:351519‑M1/33‑1 (MQ=255)
                                gggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAGTCGGATGGCACTGTGCAGACGGCTCTCGAACACCTTGGTTTGGGCGACGGctctgcatgacctgttgc                                                                                                               >  1:639671‑M1/1‑125 (MQ=255)
                                   tctggttatttgttgatactcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAAc                                                                                                            >  2:591366‑M1/107‑143 (MQ=255)
                                    ggcACGACCAGTTACTTACCGCACTTCGCGAGCTGATGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCATGGTCTAGCAGTAGGcactgcagtaactggtggtgag                                                                                                           >  2:584989‑M1/1‑121 (MQ=255)
                                       gtaatttgttgatacgcgtacatagccaataagcatgttaaacccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCt                                                                                                        >  1:727075‑M1/103‑143 (MQ=255)
                                       aCGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattaccagttggtgtcccg                                                                                                        >  2:608977‑M1/1‑118 (MQ=255)
                                        cGAGCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccgg                                                                                                       <  1:633444‑M1/143‑27 (MQ=255)
                                          aCCAGTTCCTTACCGCACTTCGCGCGCTGCTGTCACGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCGCGCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggtt                                                                                                     <  1:593632‑M1/143‑29 (MQ=255)
                                            cAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAGCCGGCTCTCGAAAACATTGGATTGGGAGGAGGctctgcagtacctgttggtggcccgggtcc                                                                                                   >  2:387129‑M1/1‑113 (MQ=255)
                                            cAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCCATATCAAATCGGATGCCACTGTGCCACCGGCTCCCGAAAACCTCGGCTTGGGAGAACGctctgcattccctgtaggtgtaccggttgc                                                                                                   >  2:127851‑M1/1‑113 (MQ=255)
                                             aGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccg                                                                                                  >  2:633499‑M1/1‑112 (MQ=255)
                                              gttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAg                                                                                                 <  2:661257‑M1/48‑1 (MQ=255)
                                              gtgacttaccggACTTCGCGCGCTGCTGTGACGCCCGAAGAATCCGGTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgt                                                                                                 <  2:33688‑M1/140‑33 (MQ=255)
                                               ttacttacCGCACTTCGCGCGCTGCTGTTACGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg                                                                                                <  1:70516‑M1/143‑34 (MQ=255)
                                               ttacttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg                                                                                                <  1:195700‑M1/143‑34 (MQ=255)
                                               tcactgaccgCAGCGCGCGCGCTGCGGTGAAGCCGCAAGAAGCCGTTGGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAGCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg                                                                                                <  2:537947‑M1/141‑34 (MQ=255)
                                                  cttacCGCACTTCGCGCGCTTCTGTTAAGCCGCAAGAATCCGTGTTGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCGCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcc                                                                                             <  2:420585‑M1/143‑37 (MQ=255)
                                                  cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGACGGctctgcattacctgttggtgtcccggttccgtggcc                                                                                             >  1:466492‑M1/1‑107 (MQ=255)
                                                   ttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCACATCGGATGGCACTGTGAAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcct                                                                                            >  2:615366‑M1/1‑106 (MQ=255)
                                                   ttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcct                                                                                            >  1:444217‑M1/1‑106 (MQ=255)
                                                      ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAGCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctggactacctgttggtgtgcctgttccgcagcctgca                                                                                         >  1:25570‑M1/1‑103 (MQ=255)
                                                      ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttca                                                                                         <  2:617107‑M1/143‑41 (MQ=255)
                                                         tacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGt                                                                                      >  1:410246‑M1/85‑143 (MQ=255)
                                                         tacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGt                                                                                      <  2:10344‑M1/59‑1 (MQ=255)
                                                          aggcagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcatacacgGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGtt                                                                                     >  2:16856‑M1/84‑143 (MQ=255)
                                                           cTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGCAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGttt                                                                                    >  2:201948/1‑143 (MQ=255)
                                                              cgcgcgCTGCTGTTAAGCCGCAAGAATCCGATTGGCGATATCAAAGCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGcgctgccatacctgtgggtgtcacggccccgtggccgcccgccccccc                                                                                 >  2:132830‑M1/1‑95 (MQ=255)
                                                               gccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                                                                >  1:124541‑M1/79‑143 (MQ=255)
                                                               gccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                                                                >  1:437988‑M1/79‑143 (MQ=255)
                                                                cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGTCGATATCAAATCGGATGGCCCTGTGCAAACGGCTCTAGAACACCTTGCTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccttgtccttcggccagcgcgc                                                                               >  1:391435‑M1/1‑93 (MQ=255)
                                                                cgcgcTGCTGTGAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgc                                                                               <  1:301576‑M1/143‑51 (MQ=255)
                                                                ccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                               <  1:412073‑M1/66‑1 (MQ=255)
                                                                  cgcgGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAACCGGATGGCACTGTGCAACCGCCCCTGGAAAGCCTTGGTTTGGGAAAATTctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcca                                                                             <  1:572597‑M1/143‑53 (MQ=255)
                                                                   gctgctGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCAGACGGCACTGTGCAAAGGGCTTTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacatgttggggtccgggttccgtggccttcagccactccgccga                                                                            >  2:723554‑M1/1‑90 (MQ=255)
                                                                       gcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAcc                                                                        >  1:83406‑M1/71‑143 (MQ=255)
                                                                       ctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacagg                                                                        <  1:85300‑M1/143‑58 (MQ=255)
                                                                        cttgttaatttcctctcttaaaagcaggaatgatgccatttgcttgttatttccccattttcattaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCg                                                                       >  1:251735‑M1/70‑143 (MQ=255)
                                                                        catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGCATAAATTTCATGGCAGCAACGGCTACATGAGGACGCACCGGTTTCATAGCTATACCg                                                                       <  1:775663‑M1/74‑1 (MQ=255)
                                                                         gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACGGTGCAAGCGGCTCTCGAAAACCTTGGCTTGGGAGAAGGctctgcataacatgttggtgtcccggttccgtggcctcacgcgacaccgccacacggcg                                                                      >  2:699565‑M1/1‑84 (MQ=255)
                                                                          tgttaaatccccctggtaaaagcaggaattatgccatttgctttttatttcttcattttcattaccgTTTGGGTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGCTTCATAGCTATACCGGt                                                                     <  1:167008‑M1/76‑1 (MQ=255)
                                                                            ttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa                                                                   >  1:533868‑M1/66‑143 (MQ=255)
                                                                            aaGCCGCAAGAATCAGTTTGGCCACATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGTTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa                                                                   <  1:94011/143‑1 (MQ=255)
                                                                                  cccgctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                                                             >  2:418567‑M1/60‑143 (MQ=255)
                                                                                  ccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                                                             >  1:639743‑M1/60‑143 (MQ=255)
                                                                                    ccctggtacaatcagtaatgatgccagtttcttgttatgtcttcatgttcataaacgTTGGTTTAGGAAAAGGAGCAAAGCTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                           >  2:351519‑M1/58‑143 (MQ=255)
                                                                                    ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGTGAGAAGGCGCAAAACTCAATGCCGCAACGGATACATTAGGACACACCCGTTTCCTAGCTATACTGGatatgagagat                                                           <  1:413301‑M1/86‑6 (MQ=255)
                                                                                    ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTCTGAttgga                                                           <  1:195493‑M1/86‑2 (MQ=255)
                                                                                    ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                           >  1:661257‑M1/58‑143 (MQ=255)
                                                                                    ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                           <  1:209345‑M1/86‑1 (MQ=255)
                                                                                      aattccgttGGCTCTATCAGAGCTGGTGGCACTGTGTAAACGGGTCTCGAAAACCTTGGGTTGGGAGAAGGAGCAAAACGCAATGCAGCAACGGCTACATTAGGACGCCCCGGTTTCGTAGCTATACCGGTTATGATtggtgg                                                         <  2:57088/136‑1 (MQ=255)
                                                                                      aaTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccgctccgccaacaggctggctgaaatgcaa                                                         >  1:438489‑M1/1‑71 (MQ=255)
                                                                                         ccGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatgg                                                      >  1:595075‑M1/1‑68 (MQ=255)
                                                                                           gTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtg                                                    <  1:418447‑M1/143‑78 (MQ=255)
                                                                                               ggCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgc                                                <  1:660874‑M1/143‑82 (MQ=255)
                                                                                                 aggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAgcagt                                              <  1:751593‑M1/99‑3 (MQ=255)
                                                                                                  gagatcaaATCGGATGGCACTGTGCAAACTGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttcgtgacccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttt                                             <  2:193622‑M1/140‑85 (MQ=255)
                                                                                                  gATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccccttt                                             >  1:581951‑M1/1‑59 (MQ=255)
                                                                                                  gATATCAAAGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttt                                             <  1:155837‑M1/143‑85 (MQ=255)
                                                                                                      tgatgccatttgcgtgttatttcttcagtttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTa                                         >  2:31111‑M1/40‑143 (MQ=255)
                                                                                                        aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAACAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTGATGATTGGGGGTAGTGAGCAGTCAGTacg                                       >  1:214398/1‑141 (MQ=38)
                                                                                                            catttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAtt                                   <  1:702607‑M1/110‑1 (MQ=255)
                                                                                                            cagttgcgtggtatttcgtcattttcataagcgTTGGTGTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAtt                                   >  1:165163‑M1/34‑143 (MQ=255)
                                                                                                            cGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa                                   <  1:342132‑M1/143‑95 (MQ=255)
                                                                                                                   gtgttatttctgcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggg                            >  1:318571‑M1/27‑143 (MQ=255)
                                                                                                                    tgttatttcttcattttcataaacgTAGTTTTGGGAGTAGGAGCAGAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGGAATCATTCAGTgggg                           <  1:783545‑M1/118‑1 (MQ=255)
                                                                                                                    aCTGTGCAAACGGCTCCCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCCATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg                           <  2:29112/143‑1 (MQ=255)
                                                                                                                        tgctatcggctctCGACAACCTTCGTCTGGGAGAATGctctgcagtaccggttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaa                       <  2:42322‑M1/137‑107 (MQ=255)
                                                                                                                            aaCGGCTCTCGAACACCTTGGTTTGGGATAAGGctctgcattacctgtcggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactgg                   <  2:157793‑M1/143‑111 (MQ=255)
                                                                                                                             ttcattttcctaaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATCCCGGTTATGTTTGATACCGTCGAGCGATCAGTACTCATTCAGTgggggtgacatgc                  <  2:160913‑M1/127‑7 (MQ=255)
                                                                                                                              cGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggca                 <  1:633499‑M1/143‑113 (MQ=255)
                                                                                                                                  tttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAAAGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaa             <  1:748041‑M1/132‑1 (MQ=255)
                                                                                                                                  tctcGAAAACCTTGGTTTGGTAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaagg             <  1:604190‑M1/143‑117 (MQ=255)
                                                                                                                                  tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaagg             >  1:430539‑M1/1‑27 (MQ=255)
                                                                                                                                  gctcgAACACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccacgccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaagg             <  1:302616‑M1/142‑117 (MQ=255)
                                                                                                                                   ctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttccgctgaagaatacccggaactggcaaaggc            <  1:581214‑M1/143‑118 (MQ=255)
                                                                                                                                      gAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaccaggctggcggcaatgcaatggcgccgcttttgctgccgcagcatccccgggcctggccacggctta         >  1:127817‑M1/1‑23 (MQ=255)
                                                                                                                                        aaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGGGGTATTGAGCAATCAGTAATCAGTCGGTGGGGGGGGAATGCCGCAAAAGCAt       <  2:27626‑M1/138‑1 (MQ=255)
                                                                                                                                         aacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGCTTCATAGCTATACCGGTTCTGATTGGTGGTATTGAGCAATCAGTACTCATTCAGTGGGGGTGGAATGCCGCACAAGCATc      <  1:203335‑M1/139‑1 (MQ=255)
                                                                                                                                            gTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTCTTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCAGAAAAAGCATCtg  <  2:366666‑M1/142‑2 (MQ=255)
                                                                                                                                             TTGGTTTAGGAGAAGGCGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAGTGAGCCGTCAGGAATCACTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGcc  >  2:167008‑M1/1‑143 (MQ=255)
                                                                                                                                             |                                                                                                                                              
TGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCC  >  NC_000913/1207649‑1207932

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.