New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4537668	44 (0.990)	3 (0.070)	3/270	6.5	6.8%	coding (1099/1107 nt)	nanM	N‑acetylneuraminic acid mutarotase
	?	NC_000913	= 4537698	41 (0.970)					coding (1069/1107 nt)	nanM	N‑acetylneuraminic acid mutarotase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGGCATTAGACTGACCAGCAACGGTAAGAACATAGTAATAATCGGGCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATT  >  NC_000913/4537532‑4537805                                                                                                                                         |                                                                                                                                          tGGCATTAGACTGACCAGCAACGGTAAGAACATAGTAATAATCGGGCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACtgt                                                                                                                                     >  1:489051/1‑143 (MQ=255)      ttAGACTGACCAGCAACGGTAAGAACATAGTAATAATCGGGCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACtt                                                                                                                                >  1:163861/1‑143 (MQ=255)        aaaCTGACCAGCAACGGTAAGAACATAGTAATAATCGGGCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTtta                                                                                                                              <  1:370609/141‑1 (MQ=255)        aGACTGACCAGCAACGGTAAGAACATAGTAATAATCGGGCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTtta                                                                                                                              <  1:115209/143‑1 (MQ=255)        aGACTGACCAGCAACGGTAAGAACATAGTAATAATCGGGCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTtta                                                                                                                              >  1:48308/1‑143 (MQ=255)              aCCAGCAACGGTAAGAACATAGTAATAATCGGGCGATATTATTGCGCTCCGATAAATTTCGCGTACTTGAAATGACAAATTGATAGCAGGGACCCTTTACCGGGGCACTGAAGCGTTAGTTTTGTACTGTGACTTTATTATcc                                                                                                                        >  2:348296/1‑143 (MQ=255)                  gcgatggTAAGAACATAGTATGTATCGGGCGATATTATTGCGTTCATATAAATTTCGCGTAAGTGAAATGACAAATTGATAGCAGGGTTCCTTTCCCGGGGCCCTGAAGCGTTAGTTTTGTATTGTGACTTTATTATCCTTca                                                                                                                    <  2:222695/138‑1 (MQ=255)                  gCAACGGTAAGAACATAGTAATAATCGGGCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCATTTACAGGGGGGGGGAAGCGTTAGGTTTGTAGTGTGACTTTATTATCCTTca                                                                                                                    >  2:463837/1‑143 (MQ=255)                    aaCGGTAAGAACATAGTAATAATCGGGCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGAAGGGCCCCTATACCGGGGCCCTGAAGCGTTAGTTTGGTACGGTGACTTTATTATccgccacc                                                                                                                  >  2:183044/1‑137 (MQ=255)                     aCGGTAAGAACATAGTAATAATCGGGCGATATTATTGCGTTCATATAAATTTCGAGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGACCTGAAGCGTTAGTTTTGTACTGTGGCTATATTATcatacaaag                                                                                                                 >  2:22756/1‑135 (MQ=255)                        gTAAGAACATAGTAAGAATGGGGCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGa                                                                                                              <  2:512788/143‑1 (MQ=255)                          atgtactttgTAAGAATCGGTCGATATTATTGCGTTCTTATAAGTTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATc                                                                                                            <  2:86456/134‑1 (MQ=255)                            gAACATAGTAATAATCGGGCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGACCCCTTTACCGGGGGCCTGAAGCGATAATTTTGTACTGTGATTTTATTATCATTCACAGTGATCaa                                                                                                          >  1:740146/1‑143 (MQ=255)                                aTAGTAATAATCGGGCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGAAAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTAATCacacct                                                                                                      >  2:651411/1‑138 (MQ=255)                                   gTAATAATCGGGCGATATTATTGCGTTCATATAAATTTCGCGCCATTGAAATGACAAATTGATATCAGTGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGaa                                                                                                   <  1:106763/143‑1 (MQ=255)                                    taataaTCGGGCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAAt                                                                                                  >  1:501400/1‑143 (MQ=255)                                        aatCGGGCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGt                                                                                              <  2:417046/143‑1 (MQ=255)                                            gggCGATATTATTGCGTTTATATAAATTTTGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCAcc                                                                                          <  1:592966/143‑1 (MQ=255)                                             ggCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCg                                                                                         >  2:433586/1‑143 (MQ=255)                                                gATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTCTATTATCCTTCACACTGATCCCAACTGAATCCGTCACCGcct                                                                                      >  2:112708/1‑141 (MQ=255)                                                    ttattGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTgcc                                                                                  >  2:296712/1‑143 (MQ=255)                                                           gTTCATCTAAGTTTCGCGTAATGGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCa                                                                           <  1:567500/143‑1 (MQ=255)                                                           gTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGTCTTTATTATCCTTCGCAGTGCTCGAACCTGCATCCGTCCCCTCTCTTCCCCCttcc                                                                           >  1:74021/1‑140 (MQ=255)                                                           gTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACGGCTTTGCCGCCTGCa                                                                           >  2:59851/1‑143 (MQ=255)                                                                   agaTTCCGTGTAATTGAAATGACAAGGTGAGAGCAGGGCGCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCAcc                                                                   <  2:305609/141‑1 (MQ=255)                                                                       ttCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTACCCGCTTTGCCGCCTCCAGTCTGAcccaca                                                               >  2:3033/1‑139 (MQ=255)                                                                        tCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCaa                                                              <  2:628842/143‑1 (MQ=255)                                                                                   aaaTGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGa                                                   <  1:198390/143‑1 (MQ=255)                                                                                    aaTGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGAc                                                  <  1:510058/143‑1 (MQ=255)                                                                                       gACAAATCGATAGCACGGCCCCTTTACCGGTGCCCTGAAGCGTTAGTTTTGTACTGTGACGTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACtat                                               <  2:466668/143‑1 (MQ=255)                                                                                                  aGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTCTTCCAGGGc                                    >  2:177944/1‑143 (MQ=255)                                                                                                     aGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCATCGCCAATAATAAATAGAATATTATTCAAGGGCAAt                                 >  1:503027/1‑143 (MQ=255)                                                                                                         ccccTTTCCCGGTGCCCTGACGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATa                             <  2:48308/143‑1 (MQ=255)                                                                                                             tttACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTcc                         >  2:583232/1‑143 (MQ=255)                                                                                                                    gggCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGcc                  >  1:406403/1‑143 (MQ=255)                                                                                                                    gggCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGcc                  <  1:463837/143‑1 (MQ=255)                                                                                                                    gggCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTCTCACCGCCAATAATCAATAGACTATTATCCCAGGGCAATGAAACCCCGCAGGcc                  >  2:398786/1‑143 (MQ=255)                                                                                                                     ggCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGccc                 <  1:433586/143‑1 (MQ=255)                                                                                                                         cTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTAACAGTGATCAAAACTGAATCCGTCAACGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAAGAGACTATGATTCCAGGGCAATGATACGCCGTAGGCCCGAcc             >  2:480176/1‑143 (MQ=255)                                                                                                                               cGTTGGTTTTGTACTGTGACTTTATTCTCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGa       <  1:644282/143‑1 (MQ=255)                                                                                                                                  tAGTTTTGTACTGTGACTATATTATCCTTCCTAGTCATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATaa    <  1:168425/143‑1 (MQ=255)                                                                                                                                   aGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAAt   <  1:516175/143‑1 (MQ=255)                                                                                                                                   aGTTTTGCACTGTGAATGGATTCTACTTCATGGTTATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAAt   <  2:157743/143‑1 (MQ=255)                                                                                                                                    gTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAAtt  <  1:716844/143‑1 (MQ=255)                                                                                                                                         |                                                                                                                                          TGGCATTAGACTGACCAGCAACGGTAAGAACATAGTAATAATCGGGCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATT  >  NC_000913/4537532‑4537805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.