New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 22874437 (0.670)8 (0.150) 7/272 4.9 18.4% intergenic (+82/‑12) rrlH/rrfH 23S ribosomal RNA of rrnH operon/5S ribosomal RNA of rrnH operon
?NC_000913 2726222 = NA (NA)intergenic (‑36/+57) rrfG/rrlG 5S ribosomal RNA of rrnG operon/23S ribosomal RNA of rrnG operon
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/228697‑228744
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctgatTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACACACCCGGCCTATCAACGTCGTCGTCTT  >  NC_000913/2726222‑2726363
                                                                                                                                                                                              
GATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCAGTTAACTC                                                 >  2:718379/1‑143
         CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCG                                        >  1:120872/1‑143
                  GATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTA                               >  2:490378/1‑143
                   ATTAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCAAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTAC                              >  2:756778/1‑143
                     TAAATCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTACGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGACCTTACAC                            >  2:255272/1‑143
                         TCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTACGCCTCCCGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCGTCCACACCC                        >  1:730008/1‑143
                         TCAGAACGCAGAAGCGGTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACACACCC                        >  1:566566/1‑143
                                    ctGCGGTCTGATTTACTCTGTATCAGGCTGAAAATCTTCTCTCCTCCGCCAAAACAGCTTCGGCGTTGTAAGGTTCAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCCTACACACCCGGCCTATCAAC             <  2:223607/141‑1
                                        gcTCTGGTTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTCGGCCTCACGGTTCATTAGTCCCGGTTAGCTCAACGCATCGCTGCGCTTACACACCCGGCCTATCAACGTCG         <  2:601104/141‑1
                                          TCTGATTTGATCTGTATCAGGCTGAAACTCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACACACCCGGCCTATCAACGTCGTC       <  1:892601/143‑1
                                          TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACACACCCGGCCTATCAACGTCGTC       <  2:883655/143‑1
                                          TCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACACACCCGGCCTATCAACGTCGTC       <  2:848899/143‑1
                                            TGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCCTCCGCCAAAACAGCTTCTGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACACACCCGGCCTATCCACGTCGTCGT     >  2:182537/1‑143
                                              gTTTAATCTGTATCTGGCTGAAAATCTTGTCTCATCCGCCAAAGCAGCTGCGGCGGTGGAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACACACCCGGCCTATCAACGTCGTCGTCT   <  1:413677/142‑1
                                              ATTTAATCTGTATCAGGCGGAAAATCTTCGCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACATACCCGGCCTATCAACGTCGTCGTCT   <  1:939461/143‑1
                                               TTTATTCTGTATCAGGCTGAAAATCTTCTCTCATCCTCCAAATCAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCCGTTAGCTCAACGCATCGCTGCGCTTACACACCCGGCCTATCAACGTCGTCGTCTT  <  1:263107/143‑1
                                               TTTAATCTGTATCATGCTGAAAATCTGCTCTCATCCGCCAAACCAGCTTCGGCGTTGTAAGGTTAATCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACACACCCGGCCTATCAACGTCGTCGTCTT  <  2:730863/143‑1
                                               TTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGCTAAGCCTCCTGGCACATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACACACCCGGCCTATCAACGTCGTCGTCTT  >  2:951345/1‑143
                                                                                                                                                                                              
GATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/228697‑228744
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctgatTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACGCATCGCTGCGCTTACACACCCGGCCTATCAACGTCGTCGTCTT  >  NC_000913/2726222‑2726363

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.