| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1979486 = | 2 (0.040) | 82 (1.490) | 55/284 | 0.0 | 97.6% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | 2101749 = | NA (NA) | intergenic (‑5/+146) | wbbL/insH1 | pseudogene, lipopolysaccharide biosynthesis protein/IS5 transposase and trans‑activator | |||||
Only 100 of 135 total aligned reads displayed.
GCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTG > NC_000913/1979344‑1979628 | tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgcctgaatcagccgagaagaatttccccgcttattcgcaccgtccc < 1:514583‑M1/1‑1 (MQ=255)tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc < 2:608823‑M1/1‑1 (MQ=255) ggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaagacatcggctcaaagatgaacagtttaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt > 1:930822‑M1/142‑143 (MQ=255) ggggataacgcctgaaatggcgacgaaacggtctaactaggctgattcaaggcatttacgggagaaaacatctgctcaaacatgaagaaatgaaatgactgagtcagccgataagaatttccccgcttattcgcaccttccCt > 1:468072‑M1/142‑143 (MQ=255) gggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagacgaatttccccgcttattcgcaccttccCTa < 2:811610‑M1/3‑1 (MQ=255) gggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctc < 1:935389‑M1/3‑2 (MQ=255) gacttccgccttacttggcgatgagtcgatctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaactgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 1:583700‑M1/140‑143 (MQ=255) aaaaTGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTaa < 1:670002/143‑1 (MQ=255) aaaaTGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTaa < 1:669960/143‑1 (MQ=255) gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt > 2:464557‑M1/139‑143 (MQ=255) ataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccacgcttctgcgcaccttccCTAAtt < 1:453925‑M1/6‑1 (MQ=255) ataaccgcttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAtt > 2:737684‑M1/138‑143 (MQ=255) tGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATACCTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaa < 1:826461‑M1/143‑5 (MQ=255) cttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagacgaatttccccgcctattcgcaccttccCTACTTAAAAACa < 1:57522‑M1/13‑1 (MQ=255) taaatggcgaagaaacggcataaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaattaccccgcttattcgcaccttccCTAATTAAATACaaa > 1:631931‑M1/129‑143 (MQ=255) aaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaag > 2:811313‑M1/128‑143 (MQ=255) tagccggagtgggatgttgCGCACAGTCCAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaa < 1:286522‑M1/134‑16 (MQ=255) taatCGAAATGCGATGTTGCGTGCAGTTAAAATATCTCACCGTAAATAATCATCTGCTACAACTCATCACTTTCACGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaa < 1:287328‑M1/143‑16 (MQ=255) ggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacctgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaagaaag > 2:744390‑M1/124‑143 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGca < 2:531517‑M1/23‑1 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGca < 1:300851‑M1/23‑1 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttagtcgcaccgtccCTAATTAAATACAAAGAAAGGca < 2:484523‑M1/23‑1 (MQ=255) gaagaaacggtctaaataggctgagtcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGca > 2:617375‑M1/121‑143 (MQ=255) cGAGATGGGATGAGGCGCACAGTGAAAATAACTCACCGTAAATAAGCATCTGCTATAAATAATCACTTGCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtcc < 2:817267‑M1/143‑20 (MQ=255) gAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccc < 1:439159‑M1/143‑21 (MQ=255) aaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGcaacaa > 2:709328‑M1/117‑143 (MQ=255) tccgtctacagaggctgatacaatgcatgtactgtaaaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATc > 1:948391‑M1/115‑143 (MQ=255) acggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcgATAATTAAATACAAAGAAAGGCAACAATc < 2:852655‑M1/29‑1 (MQ=255) ggATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatat > 2:852062‑M1/1‑117 (MQ=255) tcttacgcataatCAAAATTAAAAACTGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgag < 1:873204‑M1/138‑30 (MQ=255) aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaat < 2:50619‑M1/37‑1 (MQ=255) ataggcggatgcaaggcatttacgggagaaaaaatcggcgcaaacatgaagaaatgaaatgactgagtcagcgtagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatg > 1:113727‑M1/106‑143 (MQ=255) agcagcggacaaataactcgcagTAAATGATAATCTGCTATAGATAAGCACTTTCATGCCATACAAGATAAGCTATGTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcat < 1:864474‑M1/133‑35 (MQ=255) cacaGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACGCTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgt < 1:429009‑M1/143‑37 (MQ=255) caGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 1:866243‑M1/143‑39 (MQ=255) tCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagataatgtttgta > 1:132329‑M1/1‑102 (MQ=255) cAAAATAACTCACCGTAAAGAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacgagtccctgatatgagatcatgtttgtca < 1:117681‑M1/143‑43 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGaaa < 2:112037‑M1/47‑1 (MQ=255) ttcaaggcattgacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGaaa > 1:540312‑M1/97‑143 (MQ=255) tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATTTAGATACAGAGAAAGGCAACAATCAACTTAATGTTAATGAAAt < 2:903450‑M1/48‑1 (MQ=255) caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagacgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTACTGTTAATGAAATg < 1:188840‑M1/49‑1 (MQ=255) aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAGCAATCAACTTAATGTTAATGAAATGt < 2:28781‑M1/50‑1 (MQ=255) ggcatttacgggagaaaaaatcggctcaaacaagtttatattaattgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGttt > 1:420396‑M1/92‑143 (MQ=255) gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGtttt < 2:922505‑M1/53‑1 (MQ=255) gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGtttt > 1:852655‑M1/91‑143 (MQ=255) atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTAc < 1:552081‑M1/55‑1 (MQ=255) aCCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat < 2:877581‑M1/143‑54 (MQ=255) aataatCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca < 2:920871‑M1/143‑60 (MQ=255) ataatCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcctctggagccatcgaatag > 2:112737‑M1/1‑83 (MQ=255) ataatCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTCAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcttctggagccatagaacag > 2:195487‑M1/1‑83 (MQ=255) gaatcATCTGCTATAAATAATCGCGTGCGTGCAATACCAGATAAGCTAGTTTTAAACAGACGCTTACCGCGCAACAAACTACggaaggtgcgagcacgtccctgatatgagatcatgtttgtcatctggagccatagaacagg < 1:191673‑M1/142‑62 (MQ=255) aaaatcggcccaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACACTCAACTTAATCTTAATGAAATGTTTTACATatattagccca > 2:362403‑M1/76‑138 (MQ=255) gggctcaaacatgaagaaatgaaatgcttgtgtcaccctagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGtt > 1:418657‑M1/71‑143 (MQ=255) cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGtt > 2:732584‑M1/71‑143 (MQ=255) cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGtt > 1:608823‑M1/71‑143 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTa > 2:726151‑M1/69‑143 (MQ=255) tataAATAATCACTTTCATGCACCACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAagaaggtgcgaacaagtccctgatatgagatcaagtttgtcatctggagccatagaacagggaccaacatga > 1:23061‑M1/1‑71 (MQ=255) tataAATAATCACATGCATGCAATACAAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 1:852062‑M1/143‑73 (MQ=255) ctcaaacatgaagtaatgcaatcactgagtcaacacataagatgtgtcccgcttattctcaccttccCTAATTACATACAAAGAAAGTCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTaa > 1:927335‑M1/68‑143 (MQ=255) aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCACCTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTACTGc < 2:336839‑M1/79‑1 (MQ=255) gagtcacTGTCATGCAATACCAGATAAGCTATTTTGAAACAGACGCGTACCGCACAACAAACTAAggaaggtgggaaaaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc < 1:382855‑M1/140‑79 (MQ=255) cgaagaaaggaaaagaccgagtcagccgagaagaactgccccgcgtagccgaaccttccCTAATTAAATACAGAGAAAGGCAACAATCAACTTAATGTGAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGgaga > 2:16613‑M1/60‑143 (MQ=255) atCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa > 2:272300‑M1/1‑63 (MQ=255) gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTGAatgcggcgga < 2:894012‑M1/85‑5 (MQ=255) aCTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcaaacaagtccctgatatgagatcatgtttgtcatctcgagccatagaacacggttcatcacgagtcatcaactc > 1:599381‑M1/1‑60 (MQ=255) cTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta < 2:287661‑M1/143‑85 (MQ=255) tttCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgacatcgagcctttgtggtcatctggagccatagaacagggtccatcatgagtcatcaacttac > 2:218459‑M1/1‑58 (MQ=255) gttctggcaatagTATATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaatgtgcgaactagtccctgatatgagatcatgtttttcatctggagccatagaacagggttcatcatgagtcatcaacttac < 1:522958‑M1/137‑86 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTaca < 1:400699‑M1/93‑1 (MQ=255) tGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtaatcaacttaccttcg > 2:34664‑M1/1‑53 (MQ=255) gCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCTCCGCTATCTAAggaaggtgcgagcaagtccctgatatgagatcatgttcgtcttcttgagccatagaacatggttcatcatgagtcatcaacttaccttcgc < 2:851122‑M1/143‑92 (MQ=255) atgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTa > 1:63584‑M1/48‑143 (MQ=255) aaTACCAGATAAGCTATTGTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatcgaacagggttcatcatgagtcatcaactcaccttcgccg > 1:257821‑M1/1‑50 (MQ=255) cccaGATAAGTTTTTTTTAAACAGACACTTACCTCACCACAAGCTAAggcaggtgcgaacaagtccctgatatgtgatcatgtttgtgatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 1:902918‑M1/142‑97 (MQ=255) actggtgaagcgatttTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 2:689355‑M1/136‑97 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTc < 1:759079‑M1/101‑1 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTc < 2:627305‑M1/101‑1 (MQ=255) agtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAGCCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCtt > 1:922505‑M1/41‑143 (MQ=255) cagccgagaagaatttccccgcttattcgcaccttaaATAATTAAGCAAACAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTtata < 2:604773‑M1/106‑1 (MQ=255) aaagCTATACTTAAACATCCACTTGCCTCACAACGAACTAAggaaggttccaacaagtctctgttatgagatcatgtttgtcatctggagccatagatcatggttcatcatgagtcatcaacttaccttcgccgacagtgaat < 1:716171‑M1/142‑103 (MQ=255) gCTATTTTTAAACAGACACTTACCGCTCAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgacatctggagccatagaacagggttcgtcatgagtcatcaactcaccttcgcctacagggaattca > 2:398563‑M1/1‑38 (MQ=255) tATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcggcgacagtgaatgcagc > 2:207304‑M1/1‑36 (MQ=255) tATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc > 2:633869‑M1/1‑36 (MQ=255) gagaagaatttccccgcttattcgcaacttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTATTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTGTTTTCTTAtaatgaa < 1:756067‑M1/111‑4 (MQ=255) ttAAACAGACACTTACCGCACGACGTACGAAggaaggtgcgaacaaggccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcaacaaccaacaagctccgacagtgaattcagcagtaa < 1:341581‑M1/143‑113 (MQ=255) tttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAGTGATATGTTTTACATCTCTTTACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGaaa > 1:677911‑M1/25‑143 (MQ=255) tttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGaaa > 1:731588‑M1/25‑143 (MQ=255) aCAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggggtcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgc > 1:346143‑M1/1‑27 (MQ=255) cttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGa > 2:367979‑M1/17‑143 (MQ=255) cTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatcgaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga > 2:42197‑M1/1‑20 (MQ=255) ttgctccttccCTAATTAACTACAAAGAAAGGCAACAATCAACTTAATGTTAATGACATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACTTTTGAAATTATATGATCAcc > 1:402911‑M1/12‑143 (MQ=255) tctcaccttccTTAATTAAATACAATGAAAGGCAACAATCAACTGAATGTTAATGAAATGTTTTACATATATTAACTACTTTTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCAcc > 1:909020‑M1/12‑143 (MQ=255) ctcaccttccCTAATTCAATACTAAGAAGGGCAATAATCACCTTATTGTTAATTAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCg > 1:96980‑M1/11‑143 (MQ=255) caccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCggg < 1:669848‑M1/135‑1 (MQ=255) accttccCTAATTAAATACAAAGAAAGGCAACACCCAACCTTATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGa > 1:805195‑M1/8‑143 (MQ=255) aacaaACTAAggaaggtgcgaacaagtccctgatatcagatcatgttggtcatctggagccatagcacacggttcatcatgagtcatcaacttcccttcgccgacagtgaattcagcagtacgcgccggcacaccagaaaaga > 1:895375‑M1/1‑10 (MQ=255) cCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGAtt < 2:258368‑M1/142‑1 (MQ=255) aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaaccgccgtcagaccagaacagagattt > 1:852322‑M1/1‑5 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagcgatttt > 1:559191‑M1/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagggaattcagcagtaagcgccggcagaccagaacagcgatttt > 1:785596‑M1/1‑4 (MQ=255) | GCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTG > NC_000913/1979344‑1979628 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |