New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4080019 =NA (NA)5 (0.100) 5/270 5.8 NA noncoding (1/98 nt) REP297 (repetitive extragenic palindromic) element, contains 2 REP sequences REP297 (repetitive extragenic palindromic) element, contains 2 REP sequences
?NC_000913 4080049 = NA (NA)noncoding (31/98 nt) REP297 (repetitive extragenic palindromic) element, contains 2 REP sequences REP297 (repetitive extragenic palindromic) element, contains 2 REP sequences
Rejected: Coverage evenness skew score above cutoff.

TCTGGCAAGGGTGTGAGGAAGATGGTGTCGAATATCAGCGTAAGCTGCGCGAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGATGTGGTGGTGGGTAAATTGAGGCCAAACCGG  >  NC_000913/4079907‑4080190
                                                                                                                                              |                                                                                                                                             
tCTGGCAAGGGTGTGAGGAAGATGGTGTCGAATATCAGCGTAAGCTGCGCGAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGGACGCCTTATCCGGcc                                                                                                                                               >  2:75639/1‑143 (MQ=255)
   ggCAAGGGTGTGAGGAAGATGGTGTCGAATATCAGCGTAAGCTGCGCGAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                                                                                            >  2:566707/1‑143 (MQ=255)
      aaGGGTGTGAGGAAGATGGTGTCGAATATTAGCGTAAGCTGCGCGAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACaaa                                                                                                                                         <  2:739543/143‑1 (MQ=255)
      aaGGGTGTGAGGAAGATGGTGTCGAATATCAGCGTAAGCTGCGCGAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACaca                                                                                                                                         >  2:342423/1‑141 (MQ=255)
       aGGGTGTGAGGAAGATGGTGTGGAATATCAGCGTAAGCGGCGCGAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAg                                                                                                                                        <  1:596296/143‑1 (MQ=255)
         ggTGTGAGGAAGATGGTGTCGAATATCAGCGTACGTTGCGCGATGTATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGCGCGCGTTGTTCATGCCGTATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTc                                                                                                                                      <  1:557805/143‑1 (MQ=37)
         ggTGGGAGGAAGATGGGGTCGAATATCAGCGTAAGCGGCGCGAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTc                                                                                                                                      <  1:192031/143‑1 (MQ=255)
              gAGGAAGATGGTGTCGAATATCAGCGTAAGCTGCGCGAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGAGGCGTGAACGCCTGATCCGGCCTACCAAGTcatccc                                                                                                                                 >  1:193168/1‑138 (MQ=255)
                  aaGATGGTGTCGAATATCAGCGTAAGCTGCGCGAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGAGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAAtt                                                                                                                             <  1:601615/143‑1 (MQ=255)
                    gATGGTGTCGAATATCAGCGTAAGCTGCGCGAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGATGACAACGAGCGCGCTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACCAAGCCGTATCAATTcc                                                                                                                           >  1:114509/1‑142 (MQ=37)
                     aTGGTGTCGAATATCAGCGTAAGCGGCGCGAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCaa                                                                                                                          <  1:866513/143‑1 (MQ=255)
                      tGGGGTCGACGAGCAGCGTAAGCTGCGCGGGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCGGGCAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAAt                                                                                                                         <  2:235007/143‑1 (MQ=25)
                       ggTGTCGAATATCAGCGTAAGCTGCGCGAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATg                                                                                                                        >  2:325399/1‑143 (MQ=255)
                             gAATATCAGCGTAAGCTGCGCGAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAGTGTATTGc                                                                                                                  >  2:162211/1‑143 (MQ=255)
                                tatCAGCGTAAGCTGCGCGAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCTGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGt                                                                                                               >  2:62758/1‑143 (MQ=255)
                                tatCAGCGTAAGCTGCGCGAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGt                                                                                                               <  2:168052/143‑1 (MQ=255)
                                tatCAGCGTAAGCTGCGAAAGTAATTGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGt                                                                                                               <  1:711122/143‑1 (MQ=255)
                                     gCGTAAGCTGCGCGAGGAATGGTAATGGGAAAAAATGATGTCCACCACAGTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTAtt                                                                                                          <  1:105877/143‑1 (MQ=255)
                                      tgTAAGCTGCGCGATGAATGGTGATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTg                                                                                                         <  1:555346/142‑1 (MQ=255)
                                       ggaggCTGTGCGAGTAATGGTAATGGGAAAAAATGTCCTGAGGCGGTGGGCTGACAACGTGCGCGTTGTCCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTgg                                                                                                        <  1:925893/139‑1 (MQ=18)
                                          aGCTGCGCGAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAg                                                                                                     <  2:830623/143‑1 (MQ=255)
                                            cggcgcggaggaTGGTCATGGGAAAAAATGAGGTCAATCAGCTTGCTGACAACGTGCGCGCTGTTCATGCCGGATCCGGCGTGAACGCCTTATCCGGCCCACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGc                                                                                                   <  1:509075/132‑1 (MQ=25)
                                                  gAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATa                                                                                             >  2:918963/1‑143 (MQ=255)
                                                    ggAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATACAAAGTCGTATAAGTTCAATGTATTGCAGTTTATTGGTAGGCCTGATAag                                                                                           <  2:226385/143‑1 (MQ=255)
                                                     gattggtaatggtaaAAAATGATGTCCTTCAGGTTGCTGTTGTGGTGCGCGCTGGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAagc                                                                                          <  1:877757/140‑1 (MQ=25)
                                                     gAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACGACGTGCGCGTTGTTCATGCGGTATGTGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAagc                                                                                          <  1:721598/143‑1 (MQ=255)
                                                       aTGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACACAGTTCTGTAAGTGCAGTGTATTGCAAGTTAGTGGTAGGCCTGATAagcgc                                                                                        >  2:595266/1‑143 (MQ=21)
                                                       aTGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAagcgc                                                                                        >  1:547160/1‑143 (MQ=255)
                                                       aTGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAagcgc                                                                                        >  1:173833/1‑143 (MQ=255)
                                                        tGGTAATGGGAGAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACACAGTCGTATCAATTCAATGTACTGCAGTTTATTGGTAGGCCTGGTAagcgca                                                                                       >  2:412349/1‑143 (MQ=37)
                                                             aTGGGAAAAAATGATGTCCCTAGGTGCACGTACAACGCACACGATGCTCATACCAAAGGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAgcgcagcgca                                                                                  >  2:700805/1‑143 (MQ=16)
                                                             aTGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGAATTGCACTTGGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGGTAAgcgcagcgca                                                                                  >  2:695443/1‑143 (MQ=25)
                                                                ggAAAAAATGATGTCAATCAGATTGCGGACAACGCGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCa                                                                               <  2:818601/143‑1 (MQ=255)
                                                                          atgTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCGACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTa                                                                     <  2:162669/143‑1 (MQ=255)
                                                                            gTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATAGCAGTTTATTGGTAGGCCTGATCAGCGCAGCGCATCAAGCAAtgtcaac                                                                   >  1:919741/1‑137 (MQ=25)
                                                                               actCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGGATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCtt                                                                <  1:531141/141‑1 (MQ=255)
                                                                               aaTCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACTAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCtt                                                                <  2:487919/143‑1 (MQ=255)
                                                                               aaTCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCCATCTTACGcat                                                                >  1:611622/1‑141 (MQ=255)
                                                                               aaTCAGATTGCTGACAACGTGCGCGTTGTTCATGCCAGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATAAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTGACGCtt                                                                >  1:754674/1‑143 (MQ=255)
                                                                                  cAGATTGCTGACATCGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGtc                                                             <  1:881212/143‑1 (MQ=255)
                                                                                  cAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGtc                                                             <  2:160789/143‑1 (MQ=255)
                                                                                  cAGATTGCGGACCACGTGCGCGTTGTTGAGGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGTAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGtc                                                             <  1:321633/143‑1 (MQ=25)
                                                                                     aTTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTAGTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGtcatg                                                          >  2:424570/1‑142 (MQ=255)
                                                                                      ttGCTGGCAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGtcatca                                                         <  2:914796/143‑1 (MQ=255)
                                                                                      cggCTGACAACGGGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACACGGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGtcatca                                                         <  1:716470/141‑1 (MQ=255)
                                                                                        gCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGt                                                       <  1:794267/143‑1 (MQ=255)
                                                                                          tGAAAACGTGTGAGTTGTTCATGCCGGATGCGGCGTGAACGCATTATCCGGCCTACAACGTCGTATAACTTCAATGTATTGCAGTTTATTGGTAGGCCGGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGtct                                                     <  1:301905/143‑1 (MQ=25)
                                                                                           gACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGtctc                                                    >  1:19948/1‑143 (MQ=255)
                                                                                            aCAACGCGCACGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCa                                                   >  2:262471/1‑143 (MQ=255)
                                                                                             catcGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCAt                                                  <  1:727994/140‑1 (MQ=255)
                                                                                              agcGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCGTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGTAATCTTACGCTTGTCATCAGTCTCATg                                                 <  2:46737/141‑1 (MQ=255)
                                                                                                 gTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGccc                                              <  2:18749/143‑1 (MQ=255)
                                                                                                 gTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGccc                                              >  2:356733/1‑143 (MQ=255)
                                                                                                  tGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCCGCGCATCAGGCAATCTTACGCTTGTCGTCAGTCTCATGcccc                                             >  1:221710/1‑142 (MQ=255)
                                                                                                   gcgcGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCAt                                            >  1:102815/1‑143 (MQ=255)
                                                                                                     gcgTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCCATCTTACGCTTGTAATCAGTCTCATGCCCCTaa                                          >  1:209141/1‑143 (MQ=255)
                                                                                                     gcgTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATaa                                          <  1:731873/143‑1 (MQ=255)
                                                                                                       gttgtgCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAAcc                                        <  2:661879/143‑1 (MQ=255)
                                                                                                           ttCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTAt                                    <  2:368798/143‑1 (MQ=255)
                                                                                                           ttCAGGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTAt                                    <  1:230910/143‑1 (MQ=255)
                                                                                                              aTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGa                                 >  2:759110/1‑143 (MQ=255)
                                                                                                               tGCCGGATGCGGCGTGCACGCCTTAGCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGGCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGAt                                <  1:478941/143‑1 (MQ=255)
                                                                                                               tGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACAAAGTCGTATAAATGCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGAt                                <  2:584941/143‑1 (MQ=255)
                                                                                                               tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTAAATGTATTGCAGTTTATTGGTAGGCGTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGGCCCATCCCCAGAACCTTAttcac                                >  1:913321/1‑140 (MQ=25)
                                                                                                               ggcggggtGCGGCGTGAACGCCGTATCCGGCCTACAAAGTCGGAGAAATGCAAGGTGTTGCAGGTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGAt                                <  2:64029/136‑1 (MQ=38)
                                                                                                                 ccGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGTTAGGCCTGATAAGCCCAGCGCATCCGGCACTCTTCCGCTTCTCATCAGTCTCATGCCCATAACCTTACTGAcgt                              >  2:858638/1‑143 (MQ=25)
                                                                                                                       gcggcgTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGATgtggtggt                        <  2:173833/143‑1 (MQ=255)
                                                                                                                       aaggcgTTCACGCCGCATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGATgtggtggt                        <  2:829727/141‑1 (MQ=39)
                                                                                                                        cggcgTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTGTTGATgtggtggtg                       >  2:551813/1‑143 (MQ=255)
                                                                                                                        cggcgTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGATgtggtggtg                       <  1:700805/143‑1 (MQ=255)
                                                                                                                         ggcgTGTACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGATGtggtggtgg                      <  1:414615/143‑1 (MQ=255)
                                                                                                                         ggcgTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGAGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGATGtggaggtgg                      >  1:200955/1‑143 (MQ=255)
                                                                                                                             tGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGATGTGGGGGTGGGTaa                  >  2:783724/1‑143 (MQ=255)
                                                                                                                              gAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTGATTGATGTGGTGGTGGGTaaa                 >  2:887090/1‑143 (MQ=255)
                                                                                                                                   tcTTAGCTGGCCTACAAACTCGTGTAAGGTCAATGTCTTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGATGTGGTGGTGGGTAAATTGAg            <  1:661635/142‑1 (MQ=38)
                                                                                                                                   ccTTATCCGGCCTGCAAAGTCGTATAAATTCAATGTATTGCAGGTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGATGTGGTGGTGGGTAAATTGAg            <  1:13394/143‑1 (MQ=255)
                                                                                                                                     gtttCCGGGCGAGAAAGTCGTATACATTCAATGTGTTGCAGTTTATCGGTGGGCCTGATATGCGCTGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGATGTGGTGGTGGGTAAATTGAGGc          <  1:110227/140‑1 (MQ=255)
                                                                                                                                          cGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGATGTGGTGGTGGGTAAATTGAGGCCAAAc     >  2:430965/1‑143 (MQ=255)
                                                                                                                                             ccTACAAAGTCGTATAAATTCACTGTATTGCAGTTTATTGGTAGGCCTGATAAGCTCAGCGCATCAGGCAAGCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGATGTGGTGGTGGGTAAATTGAGGCCAAACCgg  <  1:62758/143‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                             
TCTGGCAAGGGTGTGAGGAAGATGGTGTCGAATATCAGCGTAAGCTGCGCGAGGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGATGTGGTGGTGGGTAAATTGAGGCCAAACCGG  >  NC_000913/4079907‑4080190

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.