New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3269953 =66 (0.590)3 (0.030) 3/416 NT 5.0% intergenic (+353/+261) yhaC/rnpB pentapetide repeats‑related protein/RNase P, M1 RNA component
?NC_000913 3269981 = 52 (0.500)intergenic (+381/+233) yhaC/rnpB pentapetide repeats‑related protein/RNase P, M1 RNA component

CGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAA  >  NC_000913/3269733‑3270183
                                                                                                                                                                                                                              |                                                                                                                                                                                                                                       
aaacccgcttcggcgggtttttgcttttggaggggcagaaagatgaatgactgtccacgacactattcccaaaagaaagcggcttatcggtcagtttcacctggtttaagtaaaaacccgcttcggcggggttttgctttttgagggggagaaagatgaatgactggccccgaacacttacccacaagaaagcagcttatcggtcagtttaaacccttttacgtaaaaaaacgcttcc                                                                                                                                                                                                                          <  2:856402‑M1/16‑10 (MQ=255)
     aacgggCCTACGCCTGCTCGCCAATATATTGATTTTGGGTGATTGTTGAGGCGAGATAAGGCGTTCACGCCGCATCCGGAATGAATAAAGCGCACTCAACAATCGGAACCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGttt                                                                                                                                                                                                                  <  2:224074/235‑1 (MQ=21)
     aTCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCCTTCTTTTGGGTATAGTGTTGTGGACAGTCATTAATCTTTCTCGCCCTCCAAAGGCAAAAACCCGTCTAAGCTGGttt                                                                                                                                                                                                                  >  1:403143/1‑239 (MQ=38)
        aGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGACGTGGACAGACATTCCTCTTTCTGACCCGCCAAAAGTAAAAACCCGCCGAAGCGGGttttt                                                                                                                                                                                                                >  1:849182/1‑238 (MQ=255)
          gCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTAct                                                                                                                                                                                                             >  1:677883/1‑238 (MQ=255)
              aCGCCATCGCGGAAATATATGAAATTGCGGTGCTTTTGTAGACAGGATAGGGCGTCCACGCGGCATCCGGCATGAATAAAGCCCACTCAACAATCTGAATCCCGCCGGAACGGTTTATTACGTACATCAGGAAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAACCCCGCCGAAGCGGGTTTTTACGTaaa                                                                                                                                                                                                         <  2:508163/239‑1 (MQ=21)
               tgtgtacaacagaaattatTGAACTTGCGTTCTTTTGAAGGCAGGTTAAGGCGTACCCCCCCCAACGGGTATGAATAAATCGCACTCAACAATCTGAACCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGCCCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTaaa                                                                                                                                                                                                         <  2:842999/222‑1 (MQ=18)
               cGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGACACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGAACAGGCCATCATCTTTCTACCCCTCCAAAAGTAAAAACCCGCCCAAGCGGGTTTTTCCGTaaa                                                                                                                                                                                                         >  2:611565/1‑238 (MQ=37)
               cGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAACAACCCGCCGAAGCGGGTTTTTACGTaaa                                                                                                                                                                                                         >  1:244438/1‑238 (MQ=255)
               cGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTaaa                                                                                                                                                                                                         >  1:1064596/1‑238 (MQ=255)
               cGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTaaa                                                                                                                                                                                                         >  1:508163/1‑238 (MQ=255)
               cGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTaaa                                                                                                                                                                                                         >  1:973200/1‑238 (MQ=255)
               cGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACACGCCGAAGCGGGTTTTTACGTaaa                                                                                                                                                                                                         >  1:288053/1‑238 (MQ=255)
               cGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCGTTCTTTTGGGTATAGGGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAACCCCGCCGAAGCGGGTTTTTACGTaaa                                                                                                                                                                                                         >  1:603144/1‑238 (MQ=255)
                         gCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACCTCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAACAAGGCGaa                                                                                                                                                                                                >  1:848886/1‑237 (MQ=255)
                               tatTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAACGAAAAACCCGCCGAAGCGGGTGTTTACGTAAATCAGGTGAAACTGAcc                                                                                                                                                                                         >  2:881579/1‑238 (MQ=255)
                                  tGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATa                                                                                                                                                                                     >  1:979213/1‑239 (MQ=255)
                                  tGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGGGAAACTGACCGATa                                                                                                                                                                                     >  1:1194810/1‑239 (MQ=255)
                                  tGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAGTCATCTTTCTGCCCCTCCAAAAGCAACAACCCGCCGAATCGGGTTTTTACGTAAAACAGGAGAAACTAAACGATa                                                                                                                                                                                     >  2:996361/1‑239 (MQ=255)
                                  tGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTAGACAGTCATTCATCTTTCTGCCCCTCCAAAAATAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCATGTGAAACTGACCGATa                                                                                                                                                                                     >  1:630030/1‑239 (MQ=255)
                                       ttGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGTGGATAGTGTCGCGGACAGTCATTCATCCTTCCGCTCCTTCAAACAGAAAAACCCGCCTAAGCACGTGTTTACGTAAATCAAGCCAAACTGACCGATactccg                                                                                                                                                                                >  2:66800/1‑234 (MQ=25)
                                         gCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAACAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGct                                                                                                                                                                             >  1:563386/1‑239 (MQ=255)
                                         gCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGATGAAACTGACCGATAAGCCGct                                                                                                                                                                             >  1:1074738/1‑239 (MQ=255)
                                         gCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTAATCTTTCTGCCCCTCCAAAAGCAAAAAACCGCCGAAGCGGGTTTTTACGACAAACAGGTGAAACTGACCGAAAAAccagg                                                                                                                                                                              >  2:490486/1‑236 (MQ=21)
                                          cGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGaaa                                                                                                                                                                                               >  1:842999/1‑221 (MQ=255)
                                          cGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGGATAGTATCGTGGAACGTCATTCATCTTTCTGCCCCTCCAACAGCAAAAACCCGCCGAAGCGGGTTTTTACGTACAACCgggtaaatcgaccacaaacccggtg                                                                                                                                                                             >  2:980290/1‑216 (MQ=21)
                                           tgtgtTTTTGTAGCGAGGAAAGGGTGTCCACGCCGCACCTGGTATGAATAAAGCGCACTCAACAATCTGAACCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGct                                                                                                                                                                             <  2:258450/237‑1 (MQ=18)
                                           ctatcTTTTTTAGGCAGGATAAGGCGTCCAGCCCGCATCCGGCAGAAATAAAACTGACGCAACAATCGGAACCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGct                                                                                                                                                                             <  2:56658/234‑1 (MQ=18)
                                            gtgctttagcagccagacaagggCGTCCGCGCGGCACCCGGCATAAATAAACCGCACAAAACAATCAGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAACCCGTTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAATTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGcttt                                                                                                                                                                           <  2:1064596/218‑1 (MQ=17)
                                               cTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGctttctt                                                                                                                                                                        >  1:56658/1‑239 (MQ=255)
                                                 tttGTAGGCAGGAGAAGGCGGTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAAGCTGAAACCCGCCGGAACGGTTTATTACTTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCAAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCtttt                                                                                                                                                                      <  1:611565/239‑1 (MQ=255)
                                                 tttGAAGGCAGGTAAGGCCTTTCACGCCGCAACCGGCATGAATAAAGCGACCTCAAAAAGCCGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCtttt                                                                                                                                                                      <  1:1169147/239‑1 (MQ=17)
                                                    ggaggacagagaaGGCATCCACGACGCAGCAGACATGGATAAAGCGCACGCAAAAATATAAACCCCGCCGGAACGGTTTATTAGGTACAGGAGGTAAAATTTACCGATAAGCCGCGTTCTTTTGGGTATAGTGTCGGGGACAGTCATTCATCTTTCTGACCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTgg                                                                                                                                                                    <  2:520016/227‑1 (MQ=17)
                                                     tAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTggg                                                                                                                                                                   >  1:258450/1‑238 (MQ=255)
                                                          aGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAATTGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAACCGCTTTCTTTTGGGTATAgt                                                                                                                                                             >  1:528994/1‑239 (MQ=255)
                                                          aGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGCGAAACTGACCGATAAGCCGCTTTCTTTTGGGCATAgc                                                                                                                                                             >  1:600830/1‑238 (MQ=255)
                                                          aGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGAGTCGGGGACAGACATCTATTTTTCTTCCCCTCCACAAATAAAAACCCGCCGAAGCGGGTTTTTCCGTACACAAGGTGAAACTGACCGATAAGACGCTTTCTTTTGGGTATAgc                                                                                                                                                             >  1:643036/1‑238 (MQ=18)
                                                           acgctatacccaagcgaaggcggcttatcggtcactttcgccagtgttgcgtataaccccgcgtcggcgggtttttgcttttggaggggcagaaagatgaatgactgtccacgaccctatacccaaaagaaagcggctgatcggtcagtttcacctgttttacGTAAAAACCCGCTTCGGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAgt                                                                                                                                                             >  2:674964‑M1/164‑239 (MQ=255)
                                                                   cccaaaagaaagcggcttatcggtcagtttcacctggtttacgtaaaaacccgcttcggcgggtttttgcttttggaggggcagaaagatgaatgactgtccacgacactatacccaaaagaaagcggcttatcggtcagtttcacctgttttacGTAAAAACCCGCTTCGGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGtata                                                                                                                                                               >  1:724083‑M1/156‑229 (MQ=255)
                                                                     gtcccctccacaccgggaaTGAATAAAACACACTCAACAACCTGAAACCCGCCGGAACGGTTTATTACGTACAGCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCAAAAAGTAAAACCCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGAc                                                                                                                                                    <  2:964858/220‑1 (MQ=17)
                                                                     gtccccgccgcATCCGGCATAAATAAAGCAAACCCAAAAATCTAAAACCCGCCGGACCGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCAAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGAc                                                                                                                                                    <  1:18532/233‑1 (MQ=17)
                                                                      ttCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGCGTTTTTACGTAAACCAGGCGAAACTGCACGATAAGCCGCGTTCTTTTGGGTCTAGTGTCGTgggtag                                                                                                                                                  >  2:651686/1‑235 (MQ=18)
                                                                       tCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGGATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGGCGCAGCGGGTTTTTCCGTACAACACGAGAAACTGACCGATAAGCCGGTTTCTTTTGGGagtagtacagggtatag                                                                                                                                                  >  2:222739/1‑227 (MQ=18)
                                                                             agcggcttatcggtcagtttcacctggtttacgtaaaaacccgcttcggcgggtttttgcttttggaggggcagaaagatgaatgactgtccacgacactatacccaaaagaaagcggcgtatcggtcagtttcacctgttttacGTAAAAAACCGCTTCGGCGGGTTTTTTCGTAAAACAAGGGGAACTAACCGCTAAACCGCCTTTTTTTTGggttagtgtcgtgtgcccgtacttt                                                                                                                                           <  2:724083‑M1/94‑13 (MQ=255)
                                                                                               aGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTg                                                                                                                                                       >  1:1160968/1‑209 (MQ=255)
                                                                                                                 ataccagactgAACGGTTTTTTACATACATCATGTAAAACGTACCAATAACCCGCTTTCTTTTGGGTATGTTCTCGGGGACAGTAGTTCATCTTACTGCCCCTCAAAAAGAAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAg                                                                                                       <  2:563386/229‑1 (MQ=11)
                                                                                                                  aaCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGc                                                                                                      >  1:9338/1‑239 (MQ=255)
                                                                                                                  aaCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGCCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACACGCCGAAGCGGGTTTTTACGTAAATCAGGTGACACTGACCGATACGCCGCTTTCTTTCGGGGATAGTGTTGCGGACAGTAATTATTCTTTCTGCCACACCCAAATCAAAAACCCGCTGAAGc                                                                                                      >  2:121115/1‑239 (MQ=14)
                                                                                                                       gccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGCAGCGGGGTTTTACGTAAATCAGCTGAAACTGACCGATAAGCCGCTTTCTGTTGGGGATAGTGACTTGGATAGTCCTGCATCTTTTCACTCTTCCAAACAGAAAAACCCGCTGAAGCGCGtt                                                                                                 >  2:79496/1‑239 (MQ=14)
                                                                                                                                 tttATTACTTAAACAAGTAAAAACTTACCGATAAGCCGCTTCCTTTGGGGTATGGTGTGGTGGACAGCATTTCATCTTTCGGCCCCCCAAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTaa                                                                                        <  1:1088794/238‑1 (MQ=11)
                                                                                                                                               cAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGTTTCTTTTGGGCATAGTGTCGCGGACAGTCATTCATTTTTCTGCCCCTCCAAACGCAGAAACCCGCTGAAGCGGGTTTTTACGCAAACAAGGTAAAATTg                                                                          >  2:785676/1‑238 (MQ=11)
                                                                                                                                               cAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTGTTGTGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCACAAACAAAAACCCGCAGAATCAGGGTTTTACGTAAATCAgccgctactg                                                                          >  2:1073814/1‑229 (MQ=11)
                                                                                                                                                  gTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGTGGATAGTGTCGTGGACAGGCATGCATCTTTCTGCCCCTCCAAACACAAAACCCCGCCGAAGGAGGGTTTTACGTAAAccctgctaaacagacc                                                                       >  2:313345/1‑224 (MQ=11)
                                                                                                                                                       aCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGCGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAAACCGACGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCgtaaa                                                                  >  2:769355/1‑234 (MQ=255)
                                                                                                                                                           aCCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATATTTCTGCCCCTCCAAAAGCAAAACACCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCAATAAGcc                                                               >  1:846156/1‑237 (MQ=255)
                                                                                                                                                            ccGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAACCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACAAGGTGAAACTGAACGATAAGcagaa                                                            >  1:448725/1‑235 (MQ=255)
                                                                                                                                                                                 ggTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTAGATAGTCATTCATCTTTCCGCCCCTCCAAACGGAAAACCCCGCATCAGCGGGTTTTTACCTAAACCAGGTGAAACTGACCCCTAAGCCGcgtgctgtcgagcatgccgtcg                                        >  2:235064/1‑217 (MQ=11)
                                                                                                                                                                                      aGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTaa                                                                                                                                                                                                          >  1:411052/1‑72 (MQ=34)
                                                                                                                                                                                        tgtCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTCCCCCCCCAAAAGCAAAAACCCGCCGCAGCGGGGTTTTACCTAAACCAGGCTAAACTGACCGATACACCGGGTTACTTTGGGTCTAGcactacgcattg                                 >  2:129038/1‑227 (MQ=11)
                                                                                                                                                                                           cGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGAc                                                                                                                                                    >  1:1069850/1‑120 (MQ=39)
                                                                                                                                                                                           cGTGGACAGTAATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTGGGGTATAGTGTCGTGGAc                                                                                                                                                    <  2:1069850/120‑1 (MQ=255)
                                                                                                                                                                                             tGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAACAACCCGCAGAAGCGGGTTTTTACGTCAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGCTGTGGACAGtcattc                           >  1:968288/1‑239 (MQ=255)
                                                                                                                                                                                             tGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTAGTTGCCAGGCAATCATCTTCCCGCCCCTCCAAATGAAAAACCCCGCCGAAGCGGGTTGTTACGTGAACCAGGAGATATTGACCGGTAAGACGCGTTCTTTTCGGtatacctactcggacagccatca                           >  2:151601/1‑220 (MQ=14)
                                                                                                                                                                                                  aGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTCCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGCCAACCAGGTGAAACTGACCGATAAGCCGCCTTCTTTTGGGTATAGCGACGTGGCCAGgcattaagcct                      >  2:799912/1‑233 (MQ=14)
                                                                                                                                                                                                        tcatCTTAACGCCCCCCCAAAAGAAAAACCCCGCCGAAGCGGTTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGcc                <  1:637641/239‑1 (MQ=255)
                                                                                                                                                                                                            cTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGCCGAAACTGAACCATAACCCGGCTTCTTTTGAGTATAGCACCGAGTACAGTCAGTCGTCTTTCCGCCCCt             >  2:1015433/1‑238 (MQ=14)
                                                                                                                                                                                                              ttCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCATTTTTCTGCCCCTCCa          >  1:236799/1‑239 (MQ=255)
                                                                                                                                                                                                              ttCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGACGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTAAGTAAACCAGGTAAAACTAACCCATAAGCCGCTTTGTGTTGCGTATCGCGACGTGCGAAGCCATTCACCTATCGCCCCCTGCa          >  2:124457/1‑239 (MQ=14)
                                                                                                                                                                                                                      cTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGGTTTTACGTAAACCAGGCGAAACTGACCGATAAGCCGCCTTCTGTTGAGTATAGCGTTGTGGAAAGCCATTCATCTGTCTACCTCTCCacgcacaca  >  2:1075783/1‑231 (MQ=14)
                                                                                                                                                                                                                      cTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGAGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGAAATAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGCAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGCGGTGGCCAGTAATTCATCTTCCTGCACGCCCAAAAGCaaa  >  1:1181144/1‑239 (MQ=17)
                                                                                                                                                                                                                              |                                                                                                                                                                                                                                       
CGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAA  >  NC_000913/3269733‑3270183

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.