New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3269953 =66 (0.590)3 (0.030) 3/416 NT 5.0% intergenic (+353/+261) yhaC/rnpB pentapetide repeats‑related protein/RNase P, M1 RNA component
?NC_000913 3269981 = 52 (0.500)intergenic (+381/+233) yhaC/rnpB pentapetide repeats‑related protein/RNase P, M1 RNA component

CGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAA  >  NC_000913/3269733‑3270183
                                                                                                                                                                                                                              |                                                                                                                                                                                                                                       
aaacccgcttcggcgggtttttgcttttggaggggcagaaagatgaatgactgtccacgacactattcccaaaagaaagcggcttatcggtcagtttcacctggtttaagtaaaaacccgcttcggcggggttttgctttttgagggggagaaagatgaatgactggccccgaacacttacccacaagaaagcagcttatcggtcagtttaaacccttttacgtaaaaaaacgcttcc                                                                                                                                                                                                                          <  2:856402‑M1/16‑10 (MQ=255)
     aacgggCCTACGCCTGCTCGCCAATATATTGATTTTGG‑GTGATTGTTGAGGCGAGATAAGG‑CGTTCACGCCGCATCCGGAATGAATAAAGCGCACTCAACAATCGGAACCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGttt                                                                                                                                                                                                                  <  2:224074/235‑1 (MQ=21)
     aTCAGGCCTACGCCATCTCTGCAATATATTGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCCTTCTTTTGGGTATAGTGTTGTGGACAGTCATTAATCTTTCTCGCCCTCCAAAGGCAAAAACCCGTCTAAGCTGGttt                                                                                                                                                                                                                  >  1:403143/1‑239 (MQ=38)
        aGGCCTACGCCATCTCTGCAATATATTGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGACGTGGACAGACATTCCTCTTTCTGACCCGCCAAAAGTAAAAACCCGCCGAAGCGGGttttt                                                                                                                                                                                                                >  1:849182/1‑238 (MQ=255)
          gCCTACGCCATCTCTGCAATATATTGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTAct                                                                                                                                                                                                             >  1:677883/1‑238 (MQ=255)
              aCGCCATCGCGGAAATATA‑TGAAATTGCGGTGCTTTTGTAGACAGGATAGGG‑CGTCCACGCGGCATCCGGCATGAATAAAGCCCACTCAACAATCTGAATCCCGCCGGAACGGTTTATTACGTACATCAGGAAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAACCCCGCCGAAGCGGGTTTTTACGTaaa                                                                                                                                                                                                         <  2:508163/239‑1 (MQ=21)
               tgtgtacaacagaaattatTGAACTTGC‑GTTCTTTTGAAGGCAGGTTAAGG‑CGTACCCCCCCCAACGGGTATGAATAAATCGCACTCAACAATCTGAACCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGCCCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTaaa                                                                                                                                                                                                         <  2:842999/222‑1 (MQ=18)
               cGCCATCTCTGCAATATATTGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGACACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGAACAGGCCATCATCTTTCTACCCCTCCAAAAGTAAAAACCCGCCCAAGCGGGTTTTTCCGTaaa                                                                                                                                                                                                         >  2:611565/1‑238 (MQ=37)
               cGCCATCTCTGCAATATATTGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAACAACCCGCCGAAGCGGGTTTTTACGTaaa                                                                                                                                                                                                         >  1:244438/1‑238 (MQ=255)
               cGCCATCTCTGCAATATATTGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTaaa                                                                                                                                                                                                         >  1:1064596/1‑238 (MQ=255)
               cGCCATCTCTGCAATATATTGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTaaa                                                                                                                                                                                                         >  1:508163/1‑238 (MQ=255)
               cGCCATCTCTGCAATATATTGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTaaa                                                                                                                                                                                                         >  1:973200/1‑238 (MQ=255)
               cGCCATCTCTGCAATATATTGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACACGCCGAAGCGGGTTTTTACGTaaa                                                                                                                                                                                                         >  1:288053/1‑238 (MQ=255)
               cGCCATCTCTGCAATATATTGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCGTTCTTTTGGGTATAGGGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAACCCCGCCGAAGCGGGTTTTTACGTaaa                                                                                                                                                                                                         >  1:603144/1‑238 (MQ=255)
                         gCAATATATTGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACCTCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAACAAGGCGaa                                                                                                                                                                                                >  1:848886/1‑237 (MQ=255)
                               tatTGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAACGAAAAACCCGCCGAAGCGGGTGTTTACGTAAATCAGGTGAAACTGAcc                                                                                                                                                                                         >  2:881579/1‑238 (MQ=255)
                                  tGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATa                                                                                                                                                                                     >  1:979213/1‑239 (MQ=255)
                                  tGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGGGAAACTGACCGATa                                                                                                                                                                                     >  1:1194810/1‑239 (MQ=255)
                                  tGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAGTCATCTTTCTGCCCCTCCAAAAGCAACAACCCGCCGAATCGGGTTTTTACGTAAAACAGGAGAAACTAAACGATa                                                                                                                                                                                     >  2:996361/1‑239 (MQ=255)
                                  tGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTAGACAGTCATTCATCTTTCTGCCCCTCCAAAAATAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCATGTGAAACTGACCGATa                                                                                                                                                                                     >  1:630030/1‑239 (MQ=255)
                                       ttGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGTGGATAGTGTCGCGGACAGTCATTCATCCTTCCGCTCCTTCAAACAGAAAAACCCGCCTAAGCACGTGTTTACGTAAATCAAGCCAAACTGACCGATactccg                                                                                                                                                                                >  2:66800/1‑234 (MQ=25)
                                         gC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAACAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGc‑t                                                                                                                                                                             >  1:563386/1‑239 (MQ=255)
                                         gC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGATGAAACTGACCGATAAGCCGc‑t                                                                                                                                                                             >  1:1074738/1‑239 (MQ=255)
                                         gC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTAATCTTTCTGCCCCTCCAAAAGCAAAAAACCGCCGAAGCGGGTTTTTACGACAAACAGGTGAAACTGACCGAAAAAccagg                                                                                                                                                                              >  2:490486/1‑236 (MQ=21)
                                          c‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGaaa                                                                                                                                                                                               >  1:842999/1‑221 (MQ=255)
                                          c‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGGATAGTATCGTGGAACGTCATTCATCTTTCTGCCCCTCCAACAGCAAAAACCCGCCGAAGCGGGTTTTTACGTACAACCgggtaaatcgaccacaaacccggtg                                                                                                                                                                             >  2:980290/1‑216 (MQ=21)
                                           tgtgtTTTTGTAGCGAGGAAAGGG‑TGTCCACGCCGCACCTGGTATGAATAAAGCGCACTCAACAATCTGAACCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGc‑t                                                                                                                                                                             <  2:258450/237‑1 (MQ=18)
                                           ctatcTTTTTTAGGCAGGATAAGG‑CGTCCAGCCCGCATCCGGCAGAAATAAAACTGACGCAACAATCGGAACCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTATCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGc‑t                                                                                                                                                                             <  2:56658/234‑1 (MQ=18)
                                            gtgctttagcagccagacaaggg‑CGTCCGCGCGGCACCCGGCATAAATAAACCGCACAAAACAATCAGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAACCCGTTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAATTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGc‑ttt                                                                                                                                                                           <  2:1064596/218‑1 (MQ=17)
                                               cTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGc‑tttctt                                                                                                                                                                        >  1:56658/1‑239 (MQ=255)
                                                 tttGTAGGCAGGAGAAGG‑CGGTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAAGCTGAAACCCGCCGGAACGGTTTATTACTTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCAAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCtttt                                                                                                                                                                      <  1:611565/239‑1 (MQ=255)
                                                 tttGAAGGCAGG‑TAAGGCCTTTCACGCCGCAACCGGCATGAATAAAGCGACCTCAAAAAGCCGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCtttt                                                                                                                                                                      <  1:1169147/239‑1 (MQ=17)
                                                    ggaggacagagaaGG‑CATCCACGACGCAGCAGACATGGATAAAGCGCACGCAAAAATATAAACCCCGCCGGAACGGTTTATTAGGTACAGGAGGTAAAATTTACCGATAAGCCGCGTTCTTTTGGGTATAGTGTCGGGGACAGTCATTCATCTTTCTGACCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTgg                                                                                                                                                                    <  2:520016/227‑1 (MQ=17)
                                                     tAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTggg                                                                                                                                                                   >  1:258450/1‑238 (MQ=255)
                                                          aGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAATTGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAACCGC‑TTTCTTTTGGGTATAgt                                                                                                                                                             >  1:528994/1‑239 (MQ=255)
                                                          aGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGCGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGCATAgc                                                                                                                                                             >  1:600830/1‑238 (MQ=255)
                                                          aGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGAGTCGGGGACAGACATCTATTTTTCTTCCCCTCCACAAATAAAAACCCGCCGAAGCGGGTTTTTCCGTACACAAGGTGAAACTGACCGATAAGACGC‑TTTCTTTTGGGTATAgc                                                                                                                                                             >  1:643036/1‑238 (MQ=18)
                                                           acgctatacccaagcgaaggcggcttatcggtcactttcgccagtgttgcgtataaccccgcgtcggcgggtttttgcttttggaggggcagaaagatgaatgactgtccacgaccctatacccaaaagaaagcggctgatcggtcagtttcacctgttttacGTAAAAACCCGCTTCGGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAgt                                                                                                                                                             >  2:674964‑M1/164‑239 (MQ=255)
                                                                   cccaaaagaaagcggcttatcggtcagtttcacctggtttacgtaaaaacccgcttcggcgggtttttgcttttggaggggcagaaagatgaatgactgtccacgacactatacccaaaagaaagcggcttatcggtcagtttcacctgttttacGTAAAAACCCGCTTCGGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGtata                                                                                                                                                               >  1:724083‑M1/156‑229 (MQ=255)
                                                                     gtcccctccacaccgggaaTGAATAAAACACACTCAACAACCTGAAACCCGCCGGAACGGTTTATTACGTACAGCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCAAAAAGTAAAACCCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTGGAc                                                                                                                                                    <  2:964858/220‑1 (MQ=17)
                                                                     gtccccgccgcATCCGGCATAAATAAAGCAAACCCAAAAATCTAAAACCCGCCGGACCGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCAAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTGGAc                                                                                                                                                    <  1:18532/233‑1 (MQ=17)
                                                                      ttCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGCGTTTTTACGTAAACCAGGCGAAACTGCACGATAAGCCGC‑GTTCTTTTGGGTCTAGTGTCGTgggtag                                                                                                                                                  >  2:651686/1‑235 (MQ=18)
                                                                       tCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGGATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGGCGCAGCGGGTTTTTCCGTACAACACGAGAAACTGACCGATAAGCCGG‑TTTCTTTTGGGagtagtacagggtatag                                                                                                                                                  >  2:222739/1‑227 (MQ=18)
                                                                             agcggcttatcggtcagtttcacctggtttacgtaaaaacccgcttcggcgggtttttgcttttggaggggcagaaagatgaatgactgtccacgacactatacccaaaagaaagcggcgtatcggtcagtttcacctgttttacGTAAAAAACCGCTTCGGCGGGTTTTTTCGTAAAACAAGGGGAACTAACCGCTAAACCGCCTTTTTTTTGggt‑tagtgtcgtgtgcccgtacttt                                                                                                                                           <  2:724083‑M1/94‑13 (MQ=255)
                                                                                               aGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTg                                                                                                                                                       >  1:1160968/1‑209 (MQ=255)
                                                                                                                 ataccagactgAACGGTTTTTTACATACATCATGTAAAACGTACCAATAACCCGCTTTCTTTTGGGTATGTTCTCGGGGACAGTAGTTCATCTTACTGCCCCTCAAAAAGAAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAg                                                                                                       <  2:563386/229‑1 (MQ=11)
                                                                                                                  aaCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGc                                                                                                      >  1:9338/1‑239 (MQ=255)
                                                                                                                  aaCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGCCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACACGCCGAAGCGGGTTTTTACGTAAATCAGGTGACACTGACCGATACGCCGC‑TTTCTTTCGGGGATAGTGTTGCGGACAGTAATTATTCTTTCTGCCACACCCAAATCAAAAACCCGCTGAAGc                                                                                                      >  2:121115/1‑239 (MQ=14)
                                                                                                                       gccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGCAGCGGGGTTTTACGTAAATCAGCTGAAACTGACCGATAAGCCGC‑TTTCTGTTGGGGATAGTGACTTGGATAGTCCTGCATCTTTTCACTCTTCCAAACAGAAAAACCCGCTGAAGCGCGtt                                                                                                 >  2:79496/1‑239 (MQ=14)
                                                                                                                                 tttATTACTTAAACAAGTAAAAACTTACCGATAAGCCGCTTCCTTTGGGGTATGGTGTGGTGGACAGCATTTCATCTTTCGGCCCCCCAAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTaa                                                                                        <  1:1088794/238‑1 (MQ=11)
                                                                                                                                               cAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGG‑TTTCTTTTGGGCATAGTGTCGCGGACAGTCATTCATTTTTCTGCCCCTCCAAACGCAGAAACCCGCTGAAGCGGGTTTTTACGCAAACAAGGTAAAATTg                                                                          >  2:785676/1‑238 (MQ=11)
                                                                                                                                               cAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTGTTGTGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCACAAACAAAAACCCGCAGAATCAGGGTTTTACGTAAATCAgccgctactg                                                                          >  2:1073814/1‑229 (MQ=11)
                                                                                                                                                  gTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGTGGATAGTGTCGTGGACAGGCATGCATCTTTCTGCCCCTCCAAACACAAAACCCCGCCGAAGGAGGGTTTTACGTAAAccctgctaaacagacc                                                                       >  2:313345/1‑224 (MQ=11)
                                                                                                                                                       aCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGCGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAAACCGACGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCgtaaa                                                                  >  2:769355/1‑234 (MQ=255)
                                                                                                                                                           aCCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATATTTCTGCCCCTCCAAAAGCAAAACACCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCAATAAGcc                                                               >  1:846156/1‑237 (MQ=255)
                                                                                                                                                            ccGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAACCGC‑TTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACAAGGTGAAACTGAACGATAAGcagaa                                                            >  1:448725/1‑235 (MQ=255)
                                                                                                                                                                                 ggTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTAGATAGTCATTCATCTTTCCGCCCCTCCAAACGGAAAACCCCGCATCAGCGGGTTTTTACCTAAACCAGGTGAAACTGACCCCTAAGCCGcgtgctgtcgagcatgccgtcg                                        >  2:235064/1‑217 (MQ=11)
                                                                                                                                                                                      aGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTaa                                                                                                                                                                                                          >  1:411052/1‑72 (MQ=34)
                                                                                                                                                                                        tgtCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTCCCCCCCCAAAAGCAAAAACCCGCCGCAGCGGGGTTTTACCTAAACCAGGCTAAACTGACCGATACACCGGGTTACTTTGGGTCTAGcactacgcattg                                 >  2:129038/1‑227 (MQ=11)
                                                                                                                                                                                           cGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTGGAc                                                                                                                                                    >  1:1069850/1‑120 (MQ=39)
                                                                                                                                                                                           cGTGGACAGTAATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTGGGGTATAGTGTCGTGGAc                                                                                                                                                    <  2:1069850/120‑1 (MQ=255)
                                                                                                                                                                                             tGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAACAACCCGCAGAAGCGGGTTTTTACGTCAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGCTGTGGACAGtcattc                           >  1:968288/1‑239 (MQ=255)
                                                                                                                                                                                             tGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTAGTTGCCAGGCAATCATCTTCCCGCCCCTCCAAATGAAAAACCCCGCCGAAGCGGGTTGTTACGTGAACCAGGAGATATTGACCGGTAAGACGCGTTCTTTTCGGtatacctactcggacagccatca                           >  2:151601/1‑220 (MQ=14)
                                                                                                                                                                                                  aGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTCCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGCCAACCAGGTGAAACTGACCGATAAGCCGCCTTCTTTTGGGTATAGCGACGTGGCCAGgcattaagcct                      >  2:799912/1‑233 (MQ=14)
                                                                                                                                                                                                        tcatCTTAACGCCCCCCCAAAAGAAAAACCCCGCCGAAGCGGTTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGcc                <  1:637641/239‑1 (MQ=255)
                                                                                                                                                                                                            cTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGCCGAAACTGAACCATAACCCGGCTTCTTTTGAGTATAGCACCGAGTACAGTCAGTCGTCTTTCCGCCCCt             >  2:1015433/1‑238 (MQ=14)
                                                                                                                                                                                                              ttCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCATTTTTCTGCCCCTCCa          >  1:236799/1‑239 (MQ=255)
                                                                                                                                                                                                              ttCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGACGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTAAGTAAACCAGGTAAAACTAACCCATAAGCCGCTTTGTGTTGCGTATCGCGACGTGCGAAGCCATTCACCTATCGCCCCCTGCa          >  2:124457/1‑239 (MQ=14)
                                                                                                                                                                                                                      cTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGGTTTTACGTAAACCAGGCGAAACTGACCGATAAGCCGCCTTCTGTTGAGTATAGCGTTGTGGAAAGCCATTCATCTGTCTACCTCTCCacgcacaca  >  2:1075783/1‑231 (MQ=14)
                                                                                                                                                                                                                      cTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGAGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGAAATAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGCAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGCGGTGGCCAGTAATTCATCTTCCTGCACGCCCAAAAGCaaa  >  1:1181144/1‑239 (MQ=17)
                                                                                                                                                                                                                              |                                                                                                                                                                                                                                       
CGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGC‑GTGCTTTTGTAGGCAGGATAAGG‑CGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGC‑TTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAA  >  NC_000913/3269733‑3270183

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.