| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 343,444 | A→G | 20.5% | G187G (GGA→GGG) | yahK → | broad specificity NADPH‑dependent aldehyde reductase, Zn‑containing |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 343,444 | 0 | A | G | 20.5% | 149.3 / 10.6 | 71 | G187G (GGA→GGG) | yahK | broad specificity NADPH‑dependent aldehyde reductase, Zn‑containing |
| Reads supporting (aligned to +/- strand): ref base A (6/48); new base G (13/2); total (20/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.97e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCTG > NC_000913/343209‑343681 | acaTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCCGGCCGGGCCGGGTAAAAAAGTGGGCGGGGTCGGCATCGGCGG‑GCTGGGGCat > 1:410091/1‑239 (MQ=255) aTGTCCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTTTGGGCGGCTAGTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACatat < 1:1196399/239‑1 (MQ=255) aTGACCGGCACCTATAACTCGCGCACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACatat < 2:248698/239‑1 (MQ=255) aTGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACatat < 1:697044/239‑1 (MQ=255) cGGCCCCTATAACTCGCCGACGCCTGACGAACCGTGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGAGATGTTCTGCGTATGCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGa < 1:640648/239‑1 (MQ=255) gCACCTATAACTCGCCGACTCCGGACGAACCGGTCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCCCCTTTGTTGTGTGGAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAGAGTGGGCGTGGGCGGCATCGGCGG‑TCCGGGTCCTCTGGGGagt > 2:830186/1‑237 (MQ=255) gCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGGGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAACACGTGGGCGTGGTCGGCATCGGCGG‑GCTGGGAccatgcggggtg > 1:1095589/1‑228 (MQ=255) ccTATAACTCGCCGACGCCGGACGAACCGGGCCATGCTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAg < 1:68619/239‑1 (MQ=255) cTATAACGCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGAGCGTCGTTCATGGGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGAAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGa < 1:474693/233‑1 (MQ=255) tataACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCt < 1:1012243/239‑1 (MQ=255) aCTGGCCGCCGCCGGACGAACCGGGCCATACTCGGGGCGGCTACTCACAACAGAGCGTCGTTCATGAGCGATAGGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGcc < 2:86570/239‑1 (MQ=255) tCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCa < 1:801275/239‑1 (MQ=255) tCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑GCTGGGGCATATGGGGGGTAAGCAGAccc > 1:874160/1‑238 (MQ=255) ccGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑GCTGGGACCTGTGGGGATTAAGcaaggcaacgc > 1:600686/1‑229 (MQ=255) ccGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGCAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑GCTGGGGCATATGGGGGTTAAAGTGGCCCAcgc > 1:346974/1‑239 (MQ=255) ccGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACACGCAAGAGAAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCCGGGCTCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGCAAAAAAGTGGGCGGGGTCGGAATCGGCGG‑TCGCGGGCCTGTGGGGGGTAAGCCGGtcctc > 2:474693/1‑235 (MQ=255) cGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGAt < 2:227772/238‑1 (MQ=255) cGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGAt < 1:957067/238‑1 (MQ=255) cGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGAt < 1:827773/238‑1 (MQ=255) cGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGAt < 1:521526/238‑1 (MQ=255) cGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGGTGTGTGCAGGGATCAGCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATggggg < 1:98468/236‑1 (MQ=255) cGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACAtgtg < 2:1085117/239‑1 (MQ=255) cGGGCCATACTCGTGGCGGCTACTCCCAACAGAGCGTCGTGCATGAGCTTTTTGTTCGTCGTATGCGGCACCCGCAAGAGCAGCGGGCGGCGGTGGCTCCTTTGTTGGGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACAtgtg < 2:991713/239‑1 (MQ=255) gCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGc < 2:751866/229‑1 (MQ=255) gCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGc > 1:751866/1‑229 (MQ=255) aCTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGCGCTGGGA‑ATATTGGGGTTAAGGTGGGCCCAGCGGTGGGGGGCCATGggggggtgat > 2:1113255/1‑235 (MQ=255) gggCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGGCATATGGGGATTTAGCTGGGCCCCGCGGTGGGGGCACATGGGGGGGCGttttac > 1:348422/1‑235 (MQ=255) ggcggcTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGAATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGCGGGCGTGGTCGGCATCGGCGG‑GCTGGGGCCGATGGGGGGTAAGGTGGGCCCCGCGGTGGGGGGGCGGGTGGGGGCACTTagc > 2:582088/1‑235 (MQ=255) tcattggCGATATGTTCTGCGTATTCGGAGCCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTGGTTGTGTGCAGGGATCACCACGTATTCGCCGCTCCGGCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑aa < 2:1189708/233‑1 (MQ=255) tCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑aa < 1:244495/239‑1 (MQ=255) aTGAGCGATATGTTCTGCGTATGCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑aaaa < 2:133285/239‑1 (MQ=255) gATATGTTCTGCGTATTCGTCCCCCGCAAGAGCAGCTGGCGGGGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTAGTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCt < 1:1051754/238‑1 (MQ=255) atcggTTCGGCGGATTCGTCACCCGCATGAGCAGCTGGCGGCGGTGGCTCCTTTGTGGTGTGCAGGGAGCACCACGTATGCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTg < 2:410091/234‑1 (MQ=255) gTTCTGCGTTTTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGc < 2:789627/239‑1 (MQ=255) ttCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGa < 1:544153/153‑1 (MQ=255) gCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATg < 1:658647/239‑1 (MQ=255) gCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATg < 1:243315/239‑1 (MQ=255) tCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TGCGGGGCATATGGGGGTTTAGCTGGCCCACCGGCGTGGGGGGCGTTGGGGGGCATTTATCACTTTCTGAGCCACAACCCGAGGGGGC‑AAAAACTCTGGGGCCCGTTGagttc > 2:101581/1‑235 (MQ=255) tCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGGTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCCCTGGCAGGCCGGGCCGGGTAAAAAAGTTGGCGTGGTCGGCATCGGCGG‑GCCGGGGGCTATGGGGATTAAAACGGCCCCCGGCGCGGGGGCACACTCCGGGGGAGGTAACCC‑CTCTGGGGGAAACAGCGAAGCGGCGCAAAGCCCGGGGGGcacgttatgtg > 2:56772/1‑229 (MQ=255) aCCCGCAAGAGCAGCTGGCGGCTGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGATGCTGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAAc < 1:751760/239‑1 (MQ=255) cGCAAGAGCAGCTGGCGGCGGTGGCTCCTTGGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACTCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCa < 1:948572/239‑1 (MQ=255) aaGACCGGCTGGCGGCGGTGGCGCCTTTGTGGGTGGCAGGGATAACCACGTTTTCGCCGCTAGGTCACGGGGAGGCGGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACg < 2:492312/238‑1 (MQ=255) agagCGGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGGATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCa < 2:710979/239‑1 (MQ=255) ggCTCCTTTGTTGTGTGCAGGGATCGCCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGTCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATggcgg < 1:467031/239‑1 (MQ=255) ggCTCCTTTGTTGTGTGCAGGGATCACCACGTCTTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATggcgg < 2:1045097/239‑1 (MQ=255) gCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATggcgg < 1:1037796/238‑1 (MQ=255) tCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCt < 1:2017/238‑1 (MQ=255) gCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGGTTAAGCTGGCCCACGCGATGGGGGCACATGTGGGGGCATTTACCAC‑TTCTGAGGCAAAACGCGGAGCGGC‑AAAAGCCCTGGGGGGCGATGGAGTTGTTAACTCACGCAATGACCATGAGATGGCGGCGCCTCTGAAAAGttt > 1:1019036/1‑239 (MQ=255) ggATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TGTGGGGCCTTTGGGGGTTAAGCTGGGCCACGCGATGGGGGGACCTGGGGGGGCGATTACCAC‑ATTTGGGGCACAAAGGGGCACGGG‑AAAAGGACCCGGGGACGGTGAAGTTGTTAAATTCAGCAATGTCCATGATATggggggtgctttgaaaatattcggt > 2:272769/1‑219 (MQ=255) aTCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTCAAGAGTTTCGAtt < 1:582088/238‑1 (MQ=255) tCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTc < 1:766126/239‑1 (MQ=255) accacGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑GCTGGGGCCTATGGGGGTTAAGCTGGCCCACGCGATGGGGGGGCATGGGGGGGGATTTACCAC‑TTCTGGGGCAAAACGCCAAGCGGC‑GAAAACCGTTGGGGCCGGTTATGTTGTTTAATCCCGACAAGCCGACAAGATGGGGGGCCCTCTGAAGAGGTTTGCTTTc > 2:1093630/1‑237 (MQ=255) ccacGTGTTGGCCGATCCGTCACTGGCAGGCGGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCAtt < 2:547284/239‑1 (MQ=255) gcggactCGGCGGTACGGCAATGGGAGGGCGGGACGGGTAAAAAAATGGGCGTGGTCGGGATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTATGAGGCAAAACGCGAAGCGGC‑AAAAGCCGTGGGGGCAGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCAtttt < 2:600686/233‑1 (MQ=255) acGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGGGGGTGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCAtttt < 2:192734/239‑1 (MQ=255) atgcgccgcGACGTCACTGGGAGGCCGGGCCGGGTAAAAAAGTGGGCGCGGTCGGAATCGGCGG‑TCTTGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGaa < 2:960480/235‑1 (MQ=255) aTTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGGCATATGGGGATTAAGCTGGCCCACGCGGTGGGGGCACATGTGGGGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGG‑AAAAGCCCTGGGGGCCGCTGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAAt > 1:142212/1‑239 (MQ=255) aTTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGaa < 1:20489/238‑1 (MQ=255) ccgcTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TTTGGGGCATATGGGGGATAAGCTGGCCCACGCGATGGGGGCACACGTGGTGGCCTTTATCAC‑TTCTGAGGCCAAACGCGACGCGGC‑AAAAGCCCTGGGGGCCGATGAGGTTGTTAACACACCGAATGACGATGAGATGGCGGGCCGACTGAAGAGGTTCGCTTTTACTTTGAAtctagt > 2:216639/1‑234 (MQ=255) gttcgtGGAAGGACGGGACGGGTCAAAAAGTGTGGGCGGTCGGCATAGGCGG‑TCTGGGAAATATGGGGATTAAGCTGGACCACGAGATGGGGGCACAAGTGGTGGCATTTAACAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCATGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGATATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTgcg < 1:475949/234‑1 (MQ=255) gTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTgcg < 1:349526/239‑1 (MQ=255) cgggccgggTAAAAAAGTTGGCGTGGTCGGCATCGGCGG‑TCTGTGTCATATTGGGATTAAGCTGGCCCACGCGCTGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCTGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTCACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTcg < 2:874160/239‑1 (MQ=255) gccgggTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTcgac < 2:347784/238‑1 (MQ=255) gccgggTAAAAAAGTGGGCGTGGTCGGCAGCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑GTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGGCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCAGTTTGAATACAGTAGCTGCGCTACAGAATCTcgac < 1:168364/238‑1 (MQ=255) tAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTCGGGCATATGGGGATTAAGCTGGCCCACGCGCGGGGGGCACATGTGGGGGCATTTACCAC‑TTTTGGGGCAAAACCCGGAGCGGC‑AAAAGCCCTGGGGGGCCGTGGAGTTGTTAACTCACGCAAAGCCGAAGAGATGGGGGCGCCCTTGAAAAGTTATGATTTTATTTTGAATTCAGAAGGGGCGCCACATAAACTcgcagtgttta > 2:565559/1‑230 (MQ=255) aaaaGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTacca < 1:830186/239‑1 (MQ=255) aaaaGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTacca < 1:134268/239‑1 (MQ=255) aaaaGGAGGGGTGGGTGGCATCGGCGG‑TTTGGGGAATATGGTGACTAAGCGGGACCGCGCGACGTGGGCACATGTGTTGGCAGTTACCAT‑TTCTGAGGCAAACCGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATATCGACGATTTTacca < 2:11028/239‑1 (MQ=255) ctggctggctgcgtggttCTGGGGTATATTGGTGTTAAGCTGGTACCTGGTATGGGAGCACGTGTAGGGGCATTTACCAT‑TTCTGAGTTAAAACGCGAAGCGGC‑AAAAGCCATGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCGGAATAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCGACATAATCGCGACGATTTTACCACCTTGCTGa < 2:914070/221‑1 (MQ=255) aTCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATgg < 1:101581/239‑1 (MQ=255) gACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCtg > 1:364794/1‑239 (MQ=255) | ACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGG‑TCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCAC‑TTCTGAGGCAAAACGCGAAGCGGC‑AAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCTG > NC_000913/343209‑343681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |