Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	1,383,217	A→C	13.6%	F249V (TTT→GTT)	ycjW ←	LacI family putative transcriptional repressor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,383,217	0	A	C	13.6%	228.6 / 2.9	96	F249V (TTT→GTT)	ycjW	LacI family putative transcriptional repressor
Reads supporting (aligned to +/- strand):  ref base A (44/35);  new base C (4/12);  total (48/48)
Fisher's exact test for biased strand distribution p-value = 3.03e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCATGCAGGCAGGCAATATTTTGATGCCCACTTTCAATTAATGCATCGGTCAACGCAATGCTGTC  >  NC_000913/1382984‑1383454                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                               ggCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CAcc                                                                                                                                                                                                                                           >  1:458154/1‑238 (MQ=255)  gCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCg                                                                                                                                                                                                                                          >  2:1007920/1‑238 (MQ=255)  gCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCg                                                                                                                                                                                                                                          >  1:571316/1‑238 (MQ=255)  gCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCg                                                                                                                                                                                                                                          >  1:249721/1‑238 (MQ=255)        gTAATATTCTGTGGGGACGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTTCGTCGGAAAATCGATGCCGTCCGGTGCA‑CGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTTC‑TA‑CGGAATAGTAATATTTTTCTCTGCTGCCGCACGATAAATCCTCCTTAATTTCAGGCTGTCATATGC‑A‑AA‑AACCGCCTCAg                                                                                                                                                                                                                                    >  2:901273/1‑238 (MQ=255)                 tgtgGTGACGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCATTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTg                                                                                                                                                                                                                           >  2:366082/1‑238 (MQ=255)                 tgtgGTGACGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTg                                                                                                                                                                                                                           >  2:1018913/1‑238 (MQ=255)                 tgtgGTGACGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTCCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTg                                                                                                                                                                                                                           >  2:228722/1‑238 (MQ=255)                  gtggtgACGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGAc                                                                                                                                                                                                                         <  1:1007920/239‑1 (MQ=255)                  gtggtgACGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGAc                                                                                                                                                                                                                         <  1:363865/239‑1 (MQ=255)                  gtggtgAAGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGAT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGAc                                                                                                                                                                                                                         <  2:1131719/239‑1 (MQ=255)                  ggggggACGGTTTTCCAGAAATTAAGCTGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑ACCTGC‑AG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGAc                                                                                                                                                                                                                         <  1:164761/234‑1 (MQ=255)                   tggtgACGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCCCGATACATGCTCATTAATTTCAGGATGTCAGTGGC‑A‑TA‑CACCGCCTCAGGCAACGGTGatt                                                                                                                                                                                                                        >  2:439354/1‑237 (MQ=255)                   tggtgACGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTg                                                                                                                                                                                                                           >  1:762149/1‑236 (MQ=255)                   tggtgACGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTg                                                                                                                                                                                                                           >  2:547130/1‑236 (MQ=255)                   tggtgACGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGACTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTg                                                                                                                                                                                                                           >  2:612365/1‑236 (MQ=255)                   gggtgACGGTTTTCCAGAAATTACGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑CT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAAGAGCAATATTTTTCTCTGCTGCCGCACGATAACTGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTg                                                                                                                                                                                                                           >  2:142538/2‑236 (MQ=255)                        aCGGTTTTGCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCtt                                                                                                                                                                                                                   >  1:512180/1‑239 (MQ=255)                        aCGGTTTTCGAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCtt                                                                                                                                                                                                                   >  1:22712/1‑239 (MQ=255)                        aCGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCtt                                                                                                                                                                                                                   >  2:340240/1‑239 (MQ=255)                         cGGTTTTCCAGAAAGTAAGAGTAATAAGAACTGGCAGGTTTGTTGACATAACTCCTGCGTCGGAAAATCGATGCCGCCGGGTGCA‑GGCTTTAAAA‑TAAATG‑AAAGCGTTTCATGGCT‑AT‑AACCCCCCGCCTCT‑AACTGC‑TG‑CGGAATAGCAATTTTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCtt                                                                                                                                                                                                                   <  2:1044665/238‑1 (MQ=255)                            ttttCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGA‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTtaat                                                                                                                                                                                                                <  1:518001/238‑1 (MQ=255)                             tttCCAGAGATTAAGCGAAATAATAACTCGCAGCTTTTTTGACCTAACTCCTGCGTCGGAACATCGATGCCCCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCCCCCCCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AC‑CACCGCCTCAGGCAACGGTGACTGGCTtaataa                                                                                                                                                                                                              <  2:816556/239‑1 (MQ=255)                                      aTTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGtgc                                                                                                                                                                                                     <  1:547130/239‑1 (MQ=255)                                             ggAATAATAACCGGCAGGTTTGTTGCCCTAACTCCTGCGCCGGAACATCGATGCCGCCCGGTGCA‑GCCTTTAAAA‑TAAATG‑AAAGCGTTTCATTGCT‑AT‑AACCCCCCCCCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCCCGATAAATGCTCATTAATTTCAGTCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCttt                                                                                                                                                                                               <  2:1043367/238‑1 (MQ=255)                                              gAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTa                                                                                                                                                                                             >  1:80271/1‑239 (MQ=255)                                                 taataaCTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATg                                                                                                                                                                                          <  1:831582/239‑1 (MQ=255)                                                 taataaCCCGCAGCTATGTTGACCTCACTCCTGCTTCGTAACATCGATGCCCCCCGATGCA‑GGCGTTAAAA‑TAAATG‑ACAGCTTTTCATTGCT‑AT‑AACCCCCCACCGCT‑AACTGC‑TG‑CGGAATATCAATATTTTTCTCTGCTGCCGCACAATAAATCCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CTCCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATg                                                                                                                                                                                          <  2:249721/239‑1 (MQ=255)                                                  aataaCTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGc                                                                                                                                                                                         <  1:212053/239‑1 (MQ=255)                                                         cGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑ACCCCACCTCCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCa                                                                                                                                                                                  <  1:511284/239‑1 (MQ=255)                                                         cGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCa                                                                                                                                                                                  <  1:324449/239‑1 (MQ=255)                                                         cGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGACGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTTCCGTGCTGCTTTTAATGCAGTTTCa                                                                                                                                                                                  >  2:880781/1‑239 (MQ=255)                                                                  gttgACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGtata                                                                                                                                                                          >  1:933479/1‑238 (MQ=255)                                                                       ccaaaCCCCTGCGCCGAAACATCGATGCCCCCCGCGGCA‑GGCATAAAAA‑AAAGTG‑CCAGCTTTTCTTTGCT‑AT‑ACCCCCCCACCGCT‑ACATGC‑TT‑CGGAATGGCAATTTTTTCCTCTGCTCCCCCACGATAAATGTTCATTAATTTAAGTCTTTCAGTGGC‑A‑AC‑CCCCGCCTCAGGCAACGTTGACTGGCTTAATAATTCCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGc                                                                                                                                                                     <  2:458154/235‑1 (MQ=255)                                                                        cTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCa                                                                                                                                                                   >  1:855293/1‑239 (MQ=255)                                                                           aCTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGCTAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AC‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTCATGCAGTTTCATGGGTATAACCGCCATca                                                                                                                                                                >  2:586791/1‑239 (MQ=255)                                                                             gctaggatgggtataagagacaggccCGGTGCA‑GGCTTAAAAA‑TAAAGG‑AAACCTTTTCATTGCT‑AT‑ACCCCCCCCCCGTT‑AACTGC‑GG‑CGAAATAGAAATATTTTTCTCTGCGCCCCCACAAAAAATCCTAATTATTTCCGGGCTGCCAGTGCC‑A‑AC‑CCCCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATcaa                                                                                                                                                               <  2:71800/215‑1 (MQ=255)                                                                                 gCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTc                                                                                                                                                                                   >  1:562611/1‑214 (MQ=255)                                                                                 gCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGGGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTc                                                                                                                                                                                   <  2:562611/214‑1 (MQ=255)                                                                                       gAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGAAGTTTCATGGGTATAAACGCCATCAACAATCCATtca                                                                                                                                                    >  1:300873/1‑239 (MQ=255)                                                                                            tagacccgccccGGGGCA‑GGAGTTAAAA‑TAAAGG‑AAAGGGTTACATGGCT‑A‑‑AACCCCCCCCGGGTAAACGGG‑AG‑CGAAATCCCAATTTTTTCCCCGACGCCCGCCCAAAAATGGCTATTTAATTTCAGGCTTTCGGTGCC‑A‑AA‑CACCGTCTGAGGCTAGGGTGACTGCCTTAAAACTTGCTGTGCTCCTTTTATTACAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACg                                                                                                                                               <  2:190342/230‑1 (MQ=255)                                                                                            tCGATCCCCCCCGGCCCG‑GCCGTAAAAA‑TAAATG‑ACCGGTTTTCATTTCT‑AA‑ACCCCCCCACCGCT‑AACTGC‑TG‑GGAAATACCAATTTTTTTCTCGGCTCCCCCACAATAAATGCTCTTTAATTTCAGCTTGTCGGTGGC‑A‑AA‑CGCCGCCTCAGGCAACGGTGACTGGTTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACg                                                                                                                                               <  2:1038114/239‑1 (MQ=255)                                                                                            ccgtggccgccCGGTCCG‑GGCTTTAAAA‑TAAATG‑ACAGCTTTTAATTGCT‑AT‑ACCCCACCACCGCT‑AACTGT‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGTTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACg                                                                                                                                               <  1:878058/234‑1 (MQ=255)                                                                                            ccGATGCCGCCAGGTGCA‑GGCTTTAAAA‑TAAATG‑ACAGCTTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATATTAATTTTTTTCTCTGCTGCGGCAGAAAAAATGTTAATTAATTTAAGGCTTCCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACGGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACg                                                                                                                                               <  1:901273/238‑1 (MQ=255)                                                                                            ccGATGCCCCCCGGCGCG‑GGCGTTAAAA‑AAAATG‑ACAGTTTTTTATTGCT‑AT‑AACCCACCGCGCAT‑AACTGC‑TG‑CGAAATAAAAATATTTTTCTCTGCTGCCGCACGAAAAATGCTCATTAATTTCGGGCTTTAAGGGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACg                                                                                                                                               <  2:574186/238‑1 (MQ=255)                                                                                            ccGATCCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑AACGCGTTTCTTTGCT‑AT‑ACCCCCCCACCCCT‑AACTGC‑GA‑CTGAATAGCAATATTTTTCGCGGCCGCCGCACGATAAATGCTAATTAATTTCAGGCTGTCGGTGTC‑A‑AC‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACg                                                                                                                                               <  2:943403/238‑1 (MQ=255)                                                                                            agtatcctgccCGGTGTA‑GGTGTTAAAT‑TAAAGA‑AAAGCGTTTCTTTGTG‑AA‑AACACACCCCCGCA‑AACTCC‑TG‑AGATATTGAAATATTTTGCGCCGACCCGCCACGAGAAATCCACATTATTTGCAGTCGGTGAGGGAC‑A‑AC‑CCCCGCCTTAGGCATCGTTGACTGGTTTAATAATTCCCGGGTTTTTTTCAATGCACTTGCATGGGTATAACCGCCATCAACAATCCATTCATCACg                                                                                                                                               <  2:535998/231‑1 (MQ=255)                                                                                             tcaatcccgccGGTGGAGGGCGTAAAAA‑AAAATG‑AGAGCGTTCTATTGCA‑AT‑AACCCACCCCTGCT‑AACTAC‑TG‑CGGAATACCAATTTTTTCCCCTGCGCCCGACCGATAAAGTCTCATTAATTTAAGGTTGTAGGTGCA‑A‑AC‑CACCGCCTCAGGCAACGGTGATTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCAGGGGTATAACCGCCATCAACAATCCATTCATCACg                                                                                                                                               <  2:512180/230‑1 (MQ=255)                                                                                              gtggccgccCGGTGCT‑GGTGTAAAAA‑T‑AATG‑GCAGTGTTT‑ACTGTTCATGCACCGACCCCCGTT‑GCCTGT‑TG‑CGAAATTGCAGGTTTGTTCCCGCCTGCCGCAAGAAAAGTCATAATTATTTCCAGGCTGCAAGGGGT‑A‑AA‑CCCCTCCTCGGGCAACGGTGACTGGCTTAATAATTGCCGGGCTGTTTTTAGAGCAGTTGCATGGGTATACCCGCCATCAACAATCCATTCATCACGCa                                                                                                                                             <  2:1091910/236‑1 (MQ=255)                                                                                              gATGCCCCCCGGGGCA‑GGCTTAAAAA‑TAAATG‑ACACCGTTTCATTCTT‑AT‑ACCCCCCCACCCCT‑AACGGC‑TG‑CGAAATACCAATATTTTTCTCTGCTGCCCCCCGAAAAATCCTCATTAATTCCAGTTGGTCATGGCC‑A‑AA‑CCCCGCCTCAGGCATCGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCa                                                                                                                                             <  2:200737/239‑1 (MQ=255)                                                                                                   cgccCGTTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCCCCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCa                                                                                                                                        <  1:745196/239‑1 (MQ=255)                                                                                                   cgccCGGTGCA‑GGCTTAAAAA‑TAAATG‑CCAGCTTTTCATTCCT‑AT‑ACCCCCCCCCCGCA‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTAAGTGGC‑A‑AC‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCa                                                                                                                                        <  1:468539/239‑1 (MQ=255)                                                                                                                gCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATtc                                                                                                                                                     >  1:71800/1‑214 (MQ=255)                                                                                                                 ggTTAAAAGTAAATG‑ACAGTGTTTATTTGCT‑AT‑ACCCCCCCCCCG‑‑‑AACAGCGTGCCGAAATGGCAATGTGTTCCTCGGCGGCCGCCGGATAAAGGCTCTTTAATTCCGGCTTGTCATTGGC‑A‑CC‑CCCCCCCTCAGGCACCGGGGACTGGCTTAATAATTGCCGTGTTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATgcg                                                                                                                              <  2:477298/236‑1 (MQ=255)                                                                                                                  tttAAAA‑AAAATGAAAAGCGTTTATTTGTT‑AA‑ACCCCCCCACCGCA‑ACCTGT‑TG‑CGGAATAGCAATATTTTTCCCTCCTCCCGCACGATAAAGGCTCATTATTTTCAGGCTTTCAGTGCC‑A‑AC‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATgcg                                                                                                                              <  2:112754/235‑1 (MQ=255)                                                                                                                     aaaa‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑CA‑CACCGCCTCAGGCAACGGTGACTTGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAg                                                                                                                       >  1:176903/1‑239 (MQ=255)                                                                                                                     aaaa‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AC‑AACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATAAACAATCCCTTCATCATGCACTCCAATATTATGAGCAGCCa                                                                                                                        >  2:682671/1‑238 (MQ=255)                                                                                                                     aaaa‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGATGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCTATTCATCACGCACTGCAATATTATGCGCAGCCAg                                                                                                                       >  2:486124/1‑239 (MQ=255)                                                                                                                     aaaa‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTATCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTAGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACAGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCa                                                                                                                        >  2:606602/1‑238 (MQ=255)                                                                                                                        a‑taaatG‑ACAGTCTTTCATGTCT‑AT‑AACCCCCCCCCCCA‑AACTGC‑TG‑GGGAATAGCAATATTTTCCACTGCTGCGGCACAATAAAGCCTCATAATTTTCAGGCTGTCAGTGGC‑A‑AA‑CTCCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGct                                                                                                                    <  1:438967/239‑1 (MQ=255)                                                                                                                         atgaatG‑ACATCTTTTCATTGCT‑AA‑ACCCCCCCCCCTCA‑AAGTGG‑TG‑CGAAATAGAAATTTGTTTCCCCTCGGCCGCACGTTAAAGGCTCATTAATTTAAGGGTGTCAGGGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACGGGCTTAATAATTGCCGTGCTGATTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGct                                                                                                                    <  2:338813/236‑1 (MQ=255)                                                                                                                         aaaaatG‑ACAACTTTCAATTGTA‑AC‑AACCCACCACGCTT‑AACTGC‑TG‑CGGAATAGCAATTTTTTCCTCTGCTGCCGCACAATAAATCCTCATTAATTCCAGGCTTCCAGGGGC‑A‑AA‑CCCCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGTTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGct                                                                                                                    <  2:762149/237‑1 (MQ=255)                                                                                                                                      gTTTTATGGCT‑TT‑AACCCCCCCCCGCA‑AACGTC‑GG‑CGAAATAGAAATGTTTTCCCGCGCTCCCCCAAGATAAATGATCATTAATTTAAGGCTTCCGGTGGC‑A‑AA‑CCCCGCCCAAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTAAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTtat                                                                                                            <  2:860093/235‑1 (MQ=255)                                                                                                                                      gTTTCTTTGCT‑AT‑AACCCCCCCCCGAT‑ACCTGC‑TG‑CGAAATAAAAATTTTTTTCTCTGCTGCCGCACGATAAATGCTAATTAATTCCGGTGTGCGAGGGGA‑A‑AC‑CCCCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTTCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTtat                                                                                                            <  2:80271/235‑1 (MQ=255)                                                                                                                                                   t‑aACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGAGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAAc                                                                                                  >  1:709308/1‑233 (MQ=255)                                                                                                                                                          ctccccaccatagcgactgtagtaaTAGAAATTTTTTCCTCTGCTGCCGCACATAAAATGCCTATTATTTCCATCCAGGCTG‑GCC‑ACAA‑CCCCGCCTCAGGCACCGGTGAGTGGCTTAATAATTGCCGTGCTGCTTTAAATGCAGTTCCATGGGTATAACCGCCATCAGCAATCCATTCATCACGCACTGCAATACTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAAc                                                                                         <  2:1115199/216‑1 (MQ=255)                                                                                                                                                           ccaccGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AC‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACATTCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACAGaa                                                                                     >  1:1154460/1‑239 (MQ=255)                                                                                                                                                           ccaccGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTC‑GCTTATAACCATTAACGCGATCAACCGaa                                                                                     >  2:344899/1‑238 (MQ=255)                                                                                                                                                                 cT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGACACATgg                                                                               >  1:150111/1‑239 (MQ=255)                                                                                                                                                                  cgcaaactgtgggacaaTTGCAATTTTTTCCTCGCCCGCCGCCCTAAAAATCCTAATTATTTTCAGTTTTTCGGGGGA‑A‑AC‑CACCGCCTCAGCCAACGGTGACTGGCTTAATAATTGCCGTCCTGTTTTTAATGCAGTTTCATGGGTATACCCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGACAGGCTATGCTTATAACCATTAACGCGATCAACCGAAACAt                                                                                 <  2:986323/224‑1 (MQ=255)                                                                                                                                                                           tg‑cGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACTTCaa                                                                        >  1:930307/1‑238 (MQ=255)                                                                                                                                                                           tg‑cGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCaa                                                                        >  1:253922/1‑238 (MQ=255)                                                                                                                                                                           tg‑cGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCaa                                                                        >  1:1180930/1‑238 (MQ=255)                                                                                                                                                                              cGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCg                                                                     >  1:585908/1‑239 (MQ=255)                                                                                                                                                                              cGGAATAGAAATATTTTTCTCGGCTGCCGCACGATAAATGCTCATTATGTTCAGGCTGTCAGTGCA‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGc                                                                      <  1:340240/238‑1 (MQ=255)                                                                                                                                                                               gaaaTAGCAATTTTTTTCTCTGCTGCCGCACGATAAATGCTAATTAATTTCAGTCTGTCGTTGCC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCg                                                                     <  1:467863/236‑1 (MQ=255)                                                                                                                                                                                   tAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATCACCGCCATCAACAATCCATTCATCACGCACTGCAATCTTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCa                                                                >  2:333973/1‑239 (MQ=255)                                                                                                                                                                                        atatTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCATgcag                                                           >  2:970077/1‑239 (MQ=255)                                                                                                                                                                                           tttttCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCATgcaggca                                                        >  1:452900/1‑239 (MQ=255)                                                                                                                                                                                             tttCTCTGCTGCCCCACGATAAAGGCTTATTAATTTCAGGCTGTCAGTGCC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAAGTTCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCATGcaggcagg                                                      <  1:612365/239‑1 (MQ=255)                                                                                                                                                                                                   tgctgcCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AC‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGTGTATAACCGCCATCACCAATCCATTCATCACGCACTGCAATATTATTCGCAGCCCGGCTCTGCTTATAACCATTAACGCGATCCACTGACACATGGACATCAAGCGGCGCATCCAGGCAGGCAatat                                                >  2:984304/1‑239 (MQ=255)                                                                                                                                                                                                   tgctgcCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAGTAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCACTATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGACACATGGACATCAAGCGGAGCATGCAGGCAGGCAatat                                                >  1:1050763/1‑239 (MQ=255)                                                                                                                                                                                                   tgctgcCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCATGCAGGCAGGCAatat                                                >  1:376625/1‑239 (MQ=255)                                                                                                                                                                                                     ctgcCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCATGCAGGCAGGCAATAttt                                              >  2:600033/1‑239 (MQ=255)                                                                                                                                                                                                            aagATAAATGCGCATTATTTGCAGTCTGACAGTGCC‑A‑AA‑CACCGCCTCAGGCAACGGTTACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCATTTTCATGGGTATACCCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCATGCAGGCAGGCAATATTTTGATGcc                                       <  1:613462/237‑1 (MQ=255)                                                                                                                                                                                                                        aattaattaCGGCTTGTCA‑TGGC‑A‑ATCCACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTAGAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCATGCAGGCAGGCAATATTTTGATGCCCACTTTCAATTa                           <  2:881910/238‑1 (MQ=255)                                                                                                                                                                                                                          ttAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCATGCAGGCAGGCAATATTTTGATGCCCACTTTCAATTAAt                         >  2:187957/1‑239 (MQ=255)                                                                                                                                                                                                                              tttCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCATGCAGGCAGGCAATATTTTGATGCCCACTTTCAATTAATGCa                      >  2:825504/1‑238 (MQ=255)                                                                                                                                                                                                                                   ggCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACAGCCATCAACAATCCATTCATCACGCATTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGAGATCAACCGAAACATGGACATCAAGCGGAGCATGCAGGCAGGCAATATTTTGATGCCCACTTTCAATTAATGCATCgcac                >  1:1153290/1‑236 (MQ=255)                                                                                                                                                                                                                                    tgtttccgTGGCAA‑AA‑CACCGCCTATGCAAACGGTGACTTGCTTAATAATTGCCCTGCTGTTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCATGCAGGCAGGCAATATTTTGATGCCCACTTTCAATTAATGCATCGGt                 <  2:571316/231‑1 (MQ=255)                                                                                                                                                                                                                                     ttgtaagatgC‑A‑AC‑CCCCTCCTCAGGCAACGGTGACTGGCTTAATAATTCCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCATGCAGGCAGGCAATATTTTGATGCCCACTTTCAATTAATGCATCGGt                 <  2:1180930/227‑1 (MQ=255)                                                                                                                                                                                                                                     ttGTCAGTGAA‑A‑CA‑CACCGCCACAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGTTTTTAATACAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCATGCAGGCAGGCAATATTTTGATGCCCACTTTCAATTAATGCATCGGt                 <  1:1018913/235‑1 (MQ=255)                                                                                                                                                                                                                                     cTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCATGCAGGCAGGCAATATTTTGATGCCCACTTTCAATTAATGCATCGGt                 <  1:600033/236‑1 (MQ=255)                                                                                                                                                                                                                                       gTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCg                                                                     >  1:1108820/1‑182 (MQ=255)                                                                                                                                                                                                                                       gTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCg                                                                     <  2:1108820/182‑1 (MQ=255)                                                                                                                                                                                                                                        tCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCATGCAGGCAGGCAATATTTTGATGCCCACTTTCAATTAATGCATCGGTCAACGc           >  1:450489/1‑239 (MQ=255)                                                                                                                                                                                                                                                    a‑cacCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCATGCAGGCAGGCAATATTTTGATGCCCACTTTCAATTAATGCATCGGTCAACGCAATGCTGTc  >  1:587413/1‑238 (MQ=255)                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                               GGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGAATAATAACTCGCAGCTTTGTTGACCTAACTCCTGCGTCGGAACATCGATGCCGCCCGGTGCA‑GGCGTTAAAA‑TAAATG‑ACAGCGTTTCATTGCT‑AT‑AACCCACCACCGCT‑AACTGC‑TG‑CGGAATAGCAATATTTTTCTCTGCTGCCGCACGATAAATGCTCATTAATTTCAGGCTGTCAGTGGC‑A‑AA‑CACCGCCTCAGGCAACGGTGACTGGCTTAATAATTGCCGTGCTGCTTTTAATGCAGTTTCATGGGTATAACCGCCATCAACAATCCATTCATCACGCACTGCAATATTATGCGCAGCCAGGCTCTGCTTATAACCATTAACGCGATCAACCGAAACATGGACATCAAGCGGAGCATGCAGGCAGGCAATATTTTGATGCCCACTTTCAATTAATGCATCGGTCAACGCAATGCTGTC  >  NC_000913/1382984‑1383454

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑