Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,911,547 A→G 14.2% G424G (GGA→GGG yebQ → putative transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,911,5470AG14.2% 198.1 / 3.5 75G424G (GGA→GGGyebQputative transporter
Reads supporting (aligned to +/- strand):  ref base A (14/48);  new base G (10/2);  total (25/50)
Fisher's exact test for biased strand distribution p-value = 1.15e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTT  >  NC_000913/1911310‑1911784
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                
tGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGga                                                                                                                                                                                                                                                  <  2:179228/238‑1 (MQ=255)
   ggggCTTTGTTCCCGGGTGCTGCTGCCCGCGTCGCCTGCGGATAGAAGTATTAACTCGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATGCCAGTCACCCAATAACCACACTATTATTACCTCCGGGCTTCGCGAACGTAGCCGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAAGCAGTTTGGAGAt                                                                                                                                                                                                                                               <  2:1167896/238‑1 (MQ=255)
    gggCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCCCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATaa                                                                                                                                                                                                                                             >  1:390742/1‑239 (MQ=255)
      gCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAAt                                                                                                                                                                                                                                            <  1:829982/238‑1 (MQ=255)
           tttCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTaca                                                                                                                                                                                                                                     <  1:1081426/239‑1 (MQ=255)
               ccTGGTTGTGCTGGCTGGGTTACCTGCGGATGTCAATATTATGTGGCCGATTATGTTATGTGTTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCGGTGGCATGTTAGGAACGGCTCGACTACTGGGTCAGAGTAGCGGCGCGGCGCTAGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACg                                                                                                                                                                                                                                 <  2:1978/239‑1 (MQ=255)
               ccTGGTTCTGCTGCCCGCGTCACATGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGCCTACTGGGTTCGGGGGGCGGGGCGGCGCTGGGGGGGGCGACGCGAAACAACGTTGGGGATAATGGGgcacac                                                                                                                                                                                                                                  >  2:333273/1‑238 (MQ=255)
                 tGGTGCTGCTGCCCGCGTCAGCTGCGGATATCAATATTATCTGGCCCATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGtc                                                                                                                                                                                                                               <  2:620023/239‑1 (MQ=255)
                         ctgcCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACCTGGTCAGGGTAGCGGGTCGGCGCTGGTGGCGCTGCTGCTAAATCAGTTTGGGAATTATGGTACACACGttatcgag                                                                                                                                                                                                                         >  1:988417/1‑230 (MQ=255)
                             ccGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGc                                                                                                                                                                                                                   <  1:436584/238‑1 (MQ=255)
                             ccGCGTCACCTGCGGATATCAATATTATCTGGACGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGc                                                                                                                                                                                                                   <  1:324403/238‑1 (MQ=255)
                              cgcgTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTGTACTGGGTCAGAGGAGCGGCGCGGCGCTGGTGGCGGCGATGCTTAATTAGGTTGGGGGTAATGGGAACACACGCTCGCTGATGACt                                                                                                                                                                                                                  >  2:965517/1‑238 (MQ=255)
                                             tatTAATATTCGCCGACCGATGATCTTATGTGGTCCTGGATTTGGCTTATTCCAGTCACCCGATAACCACACCAATATTACCGCCGCGCCTCGCGAACGTAGCGGTGGGGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGGGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAg                                                                                                                                                                                                  <  2:586933/239‑1 (MQ=255)
                                             taacAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAg                                                                                                                                                                                                  <  1:810790/236‑1 (MQ=255)
                                              atCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGGGCTGGTGGAGCTGATGCTAAATCAGTTTGGGGGTAATGGTACACACGGCTCGCCGATGGCTGCGGCTATTCTGGCAgg                                                                                                                                                                                                 >  2:945758/1‑238 (MQ=255)
                                                 aaTAGTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGAt                                                                                                                                                                                              <  1:1200277/239‑1 (MQ=255)
                                                   tattatCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAGCCACCCCATTATTCCCACCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATtg                                                                                                                                                                                            <  1:1139714/239‑1 (MQ=255)
                                                   tattatCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATtg                                                                                                                                                                                            <  1:401363/239‑1 (MQ=255)
                                                        tCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGcc                                                                                                                                                                                       <  1:1041543/239‑1 (MQ=255)
                                                             ccGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGGCAGAGGAGCGGCGCGGGGCTGGGGGCGGTGGTGCTTAATCAGTTTGGGGATAATTGTACACCCGGTTCGCTGGATGGTGCGGCTATTCTGGCAGGGAGTGCTGCCcgtt                                                                                                                                                                                  >  2:501119/1‑237 (MQ=255)
                                                               gatgatCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCa                                                                                                                                                                               <  1:945758/239‑1 (MQ=255)
                                                                      ttATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGttt                                                                                                                                                                        <  1:296711/239‑1 (MQ=255)
                                                                            ggtgCTGGATTTGGCTTATTCCAGCCACCCAATAACCACACCATTATTTCCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTAt                                                                                                                                                                  <  2:782783/239‑1 (MQ=255)
                                                                             gtgCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGCGTAGCGGCGGGGGCGTTGGGGCGCCGATGCGAAATCAGTTTTGAGGTAAAGGTAAAACCGTACCGGTGGTGGCCGGCGCTATTCCGTCTGTGGATGCTTGCTGTGTCAGTGGTTTACggtt                                                                                                                                                                  >  2:715946/1‑235 (MQ=255)
                                                                              tgCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCGGAGTAGCGGGGCGGCGCTGGGGGCGCCGAGGGTAAATCAGGTTGGAGATAATGGGACACACGTCTCGCCGGTGGGTGCGGCCATTTTGGCAGTGATTGCTGCCtggtgccggtgttttcggatc                                                                                                                                                                 >  2:1017119/1‑219 (MQ=255)
                                                                               gCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGGCTACTGGGGCAGAGTAGCGGCGCGGGCCTGGGGGCGCGGATGCCCAATCAGTTTGGAGGTAATGGGACACACCTCCCGCCTATGGCCGCGGCCATTTTGGCGCGTATTGCTGACTGTGTTCGTGGgttgtggatc                                                                                                                                                                 >  2:568030/1‑230 (MQ=255)
                                                                                cTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCAc                                                                                                                                                               >  1:1064165/1‑238 (MQ=255)
                                                                                      ttGGCTTCTTCCAGCCACCCAATAACCACACCAGTATTCCATCCGCGCCTCGCGAACGTAGCGGTGGAGCCGGTGGCATGTTAGGTACGGCACGTCTACAGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGGGGATGGCTGCGGCTATTCTGGTACTGATTGCTGCCTGTGTCAGTGGTTTACGTATCGCTCAGCCa                                                                                                                                                        <  2:471530/239‑1 (MQ=255)
                                                                                      ttGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCa                                                                                                                                                        <  2:1064165/239‑1 (MQ=255)
                                                                                         gCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATtg                                                                                                                                                                                            <  1:1108891/201‑1 (MQ=255)
                                                                                                    tCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTTGGTCAGGGTAGCGGCGCGGCGGTGGGGGCGGTGGTGCTTAATCAGGTTTGGGATAATGGGACACCAGTCTCGCTGGTGGCTGCGGCCATTCTTGGCGGGGTTGTCGCCCGTTTTAGTGGTTTACGTATTACTTATCCACGCTCCAGGGCCTa                                                                                                                                          >  2:758759/1‑239 (MQ=255)
                                                                                                     cACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTCCTGGGTCAGAGTAGCGGCGCGGCGCCGGTGGCGCTGATGCTAAATCAGTTTGGGGATAATGGGACCCACGTCTCGCTGGTGGCTGCGGCTATTTTGGGAGGGATTTCTGCCTGTGTCAGCGGGTTTCGTATCAATCAGCCACGGATCAGGGCATaa                                                                                                                                         >  2:300825/1‑239 (MQ=255)
                                                                                                        ccAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCa                                                                                                                                                                               <  1:225407/198‑1 (MQ=255)
                                                                                                                cgcagcATTATTTCCGCCGCGCCCCGCGAACGTAGCTGTGGGGCCGGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGt                                                                                                                              <  2:570693/234‑1 (MQ=255)
                                                                                                                  cacCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGGGGCGCTGGTGCTTAAATAGTTTTGGGATAATGGGACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCCGTGTCCGGGGTGTACGTATCACTCCGCCACGATACAGGGCCTGAAAAAAacggggtg                                                                                                                            >  2:72494/1‑234 (MQ=255)
                                                                                                                          ttaCCGCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGAc                                                                                                                    <  2:71063/239‑1 (MQ=255)
                                                                                                                           taCCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGAcg                                                                                                                   <  2:442147/239‑1 (MQ=255)
                                                                                                                             ccgccGCGCCTCGGGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCCCTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGAcgcg                                                                                                                 <  2:1158359/236‑1 (MQ=255)
                                                                                                                             ccTCCGCGGCTCGCGAGCGTAGCGGGGGGGCCAGTGGCATGTTAGGAGCGGCTCGTCTACTGGGTCAGAGTAGCGGCGCCGCTCTGGTGGCGCTGATGCTAAATCACTTTGGAGATAATGGTACACACGTCGCGCTGGTGGCTGCTGCTATTCTGTCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGCGCATAAAAAAAGCGCGTCGATCAGGTcgcg                                                                                                                 <  2:456182/239‑1 (MQ=255)
                                                                                                                                 cgcgCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGGCAGAGTAGCGGCGCGGCGCTGGGGGCGGTGGTGCTTAATCCGTTTGGGGATAATGGTAACCACGTCTCGCTGATGGCTGCGGCTATTCTGGGAGTGATTGCTGGCTTTGTCCGTGGTTTTCGGATCAACCAGCCACCGACCAGGGCATaaaaaaaagggggtgatcagggagggcttt                                                                                                             >  2:540935/1‑216 (MQ=255)
                                                                                                                                  gcgcCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCtttt                                                                                                            <  1:845384/239‑1 (MQ=255)
                                                                                                                                  gcgcCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCtttt                                                                                                            <  1:196586/239‑1 (MQ=255)
                                                                                                                                  gcgcCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGGCGGGGTAGCGGCGCGGCGGTGGCGGCGGTGAGGCTAAATCCGGTTGGGGATAATGGGACACACCTCTTGCCGCGCGCCGGGGCCTCTCTGGCTGTGCTTTGTGCCTTGTTCCGGCGGGTTAGGTTCACCAAGGCCCGACTCAAGGCATTAAAAAAGCGCGTCGATTCTGGCGCGCtttt                                                                                                            >  2:1095389/1‑239 (MQ=255)
                                                                                                                                  gcgcCGCGCGAACGTAGCGGTGGGGCCGGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCtttt                                                                                                            <  2:628129/239‑1 (MQ=255)
                                                                                                                                          gggaCGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAAGCAGTTTGGGGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCGCTCAGCCACTATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTAtt                                                                                                     <  1:568030/235‑1 (MQ=255)
                                                                                                                                           gAACGTAGGTGGGGGGCCGGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCATAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTa                                                                                                   <  2:168939/239‑1 (MQ=255)
                                                                                                                                             aCGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACt                                                                                                 <  1:758759/239‑1 (MQ=255)
                                                                                                                                                    ggTGGGGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACTCGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTGTTAGTATTTACTTCatat                                                                                           <  1:355915/238‑1 (MQ=255)
                                                                                                                                                       ggAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTAc                                                                                        <  1:501119/238‑1 (MQ=255)
                                                                                                                                                          gCCTGTGGCATGTTAGTAACGGCTAGACTGCGGGGTCAGGATAGCGGGGCGGCGCTGGTGGCGCTGATGCTAAATCATTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGAGCTTTTTAGTATTTACTTCATATTACTTc                                                                                     <  2:988417/238‑1 (MQ=255)
                                                                                                                                                          gCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCa                                                                                                                                                                               <  1:1212512/148‑1 (MQ=255)
                                                                                                                                                          gCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTc                                                                                     <  1:1017119/238‑1 (MQ=255)
                                                                                                                                                            cAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAg                                                                                   <  1:457535/238‑1 (MQ=255)
                                                                                                                                                                ggCATGTTAGGAACGGCTCGTCTACTGTGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTAtt                                                                              <  1:1115597/239‑1 (MQ=255)
                                                                                                                                                                ggCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATTCTAAATCAGTGTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTAtt                                                                              <  1:333273/239‑1 (MQ=255)
                                                                                                                                                                ggCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGt                                                                                 <  1:923745/236‑1 (MQ=255)
                                                                                                                                                                   aTGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCa                                                                            <  1:419331/238‑1 (MQ=255)
                                                                                                                                                                           aaCGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACg                                                                    <  2:248848/238‑1 (MQ=255)
                                                                                                                                                                            aCGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCa                                                                  <  1:884931/239‑1 (MQ=255)
                                                                                                                                                                                cTCGTCTACTGGGTCAGAGTAGCGGCGGGGCGCTGGGGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCCTAAAAAAAGCGCGTCGAACAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTATCCCGtcaccata                                                                >  2:1073831/1‑230 (MQ=255)
                                                                                                                                                                                cTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAGTCAGTTTGGAGATAATGTTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCagag                                                               <  2:388521/238‑1 (MQ=255)
                                                                                                                                                                                cTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTa                                                                                                   <  2:658401/202‑1 (MQ=255)
                                                                                                                                                                                cTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCaga                                                                >  1:1075595/1‑237 (MQ=255)
                                                                                                                                                                                cTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCaga                                                                >  1:1134936/1‑237 (MQ=255)
                                                                                                                                                                                cTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGGGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTa                                                                                                   >  1:658401/1‑202 (MQ=255)
                                                                                                                                                                                cTCGTCTACTGGGGCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCaga                                                                >  1:821156/1‑237 (MQ=255)
                                                                                                                                                                                     cTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCaa                                                         <  1:564390/239‑1 (MQ=255)
                                                                                                                                                                                             tCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGCGATAATGGTACACACGTCTCGCGGATGGCTGCGGCGATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGCTTACGTATCACTCCGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACCCGCTTTTTAGTCTTTACTTCATATTACTTCAGGTCTTCACCCGCACGCAGACCTTCCATTCGTTTa                                                 >  2:200985/1‑239 (MQ=255)
                                                                                                                                                                                             tCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTa                                                 >  1:1037353/1‑239 (MQ=255)
                                                                                                                                                                                                           gcggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCgggt                                    <  1:1009428/239‑1 (MQ=255)
                                                                                                                                                                                                           gcggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACGTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCgggt                                    <  1:597599/239‑1 (MQ=255)
                                                                                                                                                                                                            cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCa                                                                            <  1:832682/198‑1 (MQ=255)
                                                                                                                                                                                                            cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCa                                                                            >  2:832682/1‑198 (MQ=255)
                                                                                                                                                                                                                           tGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGCATTTACTTCATATTACTTCAGGTATTCAACCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGAGGGGCAtttagacgc                     >  2:1050222/1‑230 (MQ=255)
                                                                                                                                                                                                                             aTGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGGCGGGGATGaacaaacca                   >  1:827374/1‑234 (MQ=255)
                                                                                                                                                                                                                                 tAAATCAGTTTGTAGATAATGGTACACACGGCTCGCTGATGGCTGCGGCTAGTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGa               <  2:390742/238‑1 (MQ=255)
                                                                                                                                                                                                                                              agaTAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACtt  <  1:1157319/238‑1 (MQ=255)
                                                                                                                                                                                                                                              agaTAAGGGTACACACGTCTCGCTGCTGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACtt  <  1:1219837/238‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                
TGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTT  >  NC_000913/1911310‑1911784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: