Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,206,512 G→T 12.8% V18F (GTC→TTC)  ttdA → L‑tartrate dehydratase, alpha subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,206,5120GT12.8% 129.3 / 2.5 74V18F (GTC→TTC) ttdAL‑tartrate dehydratase, alpha subunit
Reads supporting (aligned to +/- strand):  ref base G (18/43);  new base T (8/2);  total (29/45)
Fisher's exact test for biased strand distribution p-value = 3.67e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.08e-01

ATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCGAGCTGCAAAGCATA  >  NC_000913/3206276‑3206748
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                               
aTAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGAATTTTTCACACAAAAACAAAAAATTGAGTTGCCATGATGAGAGGAAATAAAAAAAAAAAAGAAATGAATAAGTTTAAAAAAATTGTc                                                                                                                                                                                                                                               >  2:757226/1‑239 (MQ=255)
aTAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTTATACAAAAAAAAAAAATGACGTTGTCCTTAGCAGGGCAAAGTATAAAAAAAAAGCAATGAAAAAGTGTACAGAGATTg                                                                                                                                                                                                                                                 >  2:13286/1‑237 (MQ=255)
   aGCTCAGTTTATTTTGAAAAACATTGCCATTCCCTGCTCTGTCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAATTGTTAATTACATATTCACGGTGGCAAAAAATAAAAAACCACAATTTTAGTGGTATTTTGTGGCGGTAAATTTTTCAAAACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCt                                                                                                                                                                                                                                            <  2:609553/239‑1 (MQ=255)
   aGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCt                                                                                                                                                                                                                                            <  1:13286/239‑1 (MQ=255)
          tgtATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTTGATTTTTTCCAGCAAAAACAAAAAATTGAAATTTCCAGATTGGGGGAAGTAATAAAGAACAAGCAAGGAAAAAATTGACAAAGAATTTTGCTAACattt                                                                                                                                                                                                                                     >  1:1045251/1‑238 (MQ=255)
          tgtATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTTGAATTTTTAAAAAAAAAACAAAAAATGTGATTTGCCAGAGATGAGAGAGGTAAAATACATAAGAAGATAATAAGCTGTCAGAGATTCTTGCTAACttt                                                                                                                                                                                                                                      >  2:1124421/1‑238 (MQ=255)
                tcccAAAACTTCGCTATTCCCGGCTTTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATTTCCGCGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTATTTTGGGGGGGTGAATTTTCCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCACCAGGCAGTGAAAAAGTTGACAGAGATTGTCGCTAACTTTACCGCCa                                                                                                                                                                                                                              <  1:909580/236‑1 (MQ=255)
                  acAAAACATTGCCATTCCCTGCTCTGGCGAAATATTAATTCTTATTTTCTCTTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGGGGCGGTGAATTTTTCCAGACAAATACAAAAACGGGATTTGCCATGATGAGCGAAAGTAATAACCAACAGGCAGTGAATAAGTTGAAAGAGATTGTCGCTACTTTTACCGCCATg                                                                                                                                                                                                                            <  1:391680/238‑1 (MQ=255)
                    aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCACACAAAAAATAAAAATTGAGTTTTGCTTATTAGCGTAAATAATAAAAAATACGAAGAGAATAAATTAGAACAGAGTGTCGCTCACCTTATACCCATGAt                                                                                                                                                                                                                          >  1:854016/1‑239 (MQ=255)
                      aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAAGACAAAACAAAAAATACAGTTGCCATCATGGGCGGAAGGAATAAGACACAAGCAGTGACAAAGTTGACAAAGATTATTGATAACTTTtcctcccttcttt                                                                                                                                                                                                                        >  2:915883/1‑232 (MQ=255)
                           tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATACAAAAAATGTAGGTGCCATGATTAGCGAAAGTAATAAAAAACAGGGAGGGAATAAGTTTACAGAGAGTGTGGCTAAATTTACCCCCATGATTTCTAc                                                                                                                                                                                                                   >  1:1101461/1‑238 (MQ=255)
                              taTTCCCTTGTTTGCCGAAATATTCATTCTTATTTTCGCTTTGATTCACGAAATGTTAATTACATATTCACGGTGGCAAAAAATAAAAAACCAAATTTTTAGTGGTAGTTTGGGGCGGTGAATTTTCCCAAACAAATAAAAAAACTGGAGTCGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGa                                                                                                                                                                                                               <  1:847011/238‑1 (MQ=255)
                               aTTCCCTTCTCGGGCGAAATATTCATTCTTATTTTCGCTTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGGGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGaa                                                                                                                                                                                                              <  1:829109/239‑1 (MQ=255)
                                   cctgctgtgacgtatttgtcagtcTTATTTACACGTGGATTCACAAACTTTTAATTTGATATTGACGGTGGAAAAAAAAATAAAACCCCATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTCCAAGCAAAAACCAAAAACTGGTTTGGCCAGGTTAAGCAAAACTAAAAGGCAAAAGGCCGTGAAAAAGTTAAAATTGATGTTCGGTACCTTTTCCGCCATGATTTCTACCCGAATGcc                                                                                                                                                                                                          <  2:768641/221‑1 (MQ=255)
                                        aaaaagcaaaTATTCATTCTAATTTCGGCGTTAATTCCAAACTTGTTAATTACAATTTGAGGGTGGAAAAAAATAAAAAACAAAATTTTAAGTGGTAGTTGGTGGGGGTGAATTTTTCAAAAAAAAAAAAAAAACGGGAGTGGCCATGAGGAGCGAAAGTAATAAGCAACAGGTAGTGAATAAGTTGACGGAGATTGTCGTTACCTTTACCGCCATGATTTCTACCCGAATGCCtgatg                                                                                                                                                                                                     <  2:339379/231‑1 (MQ=255)
                                                  tataCATTCTTATTTTCGCGTTAATTCACGACCTGTTAATTACATATTCACGGTGGAAAAAAATATAAAACCCCATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTACCAGAAAAATACAAAAACTGGAGTTGCAATGAGGAGCGAAAGTAATAAGCAACAGGCAGTGAAAAAGTTGACAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                                                           <  1:166732/239‑1 (MQ=255)
                                                  aattcactcTTATTTTCGGTTTGATACACAAAGTGTTAATTACATATGCACGGTGGAAAAAAATAAAAAACAAAATTTTGAGGGGTAGTTTGTGGGGTAGAATTTTTCCAGAAAAAAAAAAAAACTGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACGGGCAATAAATAAGTTGACAGATATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                                                           <  2:125645/238‑1 (MQ=255)
                                                         tcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCCGACAAAAACAAAAACAAGAGATGGCCTGATGAGCGGAAATAAAAAGAAAAAAGCAGTGAAAAAGATGACACAGAATTTAGCACAATTTATCCCCCTGATTTCTACCCGAATGTCtcatggagggggggatttgtt                                                                                                                                                                                     >  1:339379/1‑222 (MQ=255)
                                                          cTTATTTTCGTGTTTATTCACGAACTGTAAATTAAATATTCACGGTGAGAAAAAAAATAAAACCAAATTTTGAGGGGGAGTTTGTGGCGGTGAATTTTTCAAGAAAAAAACAAAAACTGGTGTTGCCATGATGAGCGAAATTAATAAGCAACAGGGAGTGAATAAGTTGAAAGAGATTGTCGATAACTTAACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaa                                                                                                                                                                                   <  1:608541/239‑1 (MQ=255)
                                                          cTTATTTACGGATTGATCCATGATCTGTTAATTAAATATTAAGGGTGAAAAAAAATAAAAAACCACATTTTAAGTGGAATTTAGTGGCGGTGAATTTTACCAGAAAAAAAAAAAACCGGGATTTGCAATGATGAGCGAAAGTAATAACCAACAGGTAGTTAAAAAGTGGAAAGAGATTGTCGTTACTTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaa                                                                                                                                                                                   <  2:529126/239‑1 (MQ=255)
                                                          cTTATTTACGCTTTAATTCACGAATTGTTAATTACATATGCACGGTGGCAAAAAATAAAAAACCACATTTTTAGGGGTAGTTTGTGGCGGTAAATTTTCCCAGACAAATACAAAAACTGGAGTTGCCATAATGAGCGAAAGTAAAAAGCAACAGGCAGTGAATAATTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaa                                                                                                                                                                                   <  1:148751/239‑1 (MQ=255)
                                                           ttATTTTCGTGTTAATCCACAAACTGTTAATTACATTTTCACGGTGGCAAAAAATAAAAAACAACATTTATAGGGGTGGTTTGTGGCGGTAAATTTTCCAAAAAAAATACAAAAACGGGAGTTCCAATAAGGATCAAAATAAATAAGCAACAGGCATTAAATAAGTGGAAAGAGATTGTCGTTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaa                                                                                                                                                                                  <  2:161297/239‑1 (MQ=255)
                                                            tATTTTCGCGTTGATTCACGAACTTTTAATTACATATCCCCGGGGGAAAAAAATAAAAACCCACATTTTTAGTGGTAGTTTGTGGCGGTAAATTTTTCAAGACAAATACAAAAACTGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                                                                 <  1:42500/239‑1 (MQ=255)
                                                            tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTTATACAAAAACAAAAACTTGAGTTGCCATTGTGTGGGTAACGAAAAAAAAAAAAGCACAGAAAAAATTTGAAAAGATTTTGCATAACTTTTACGCCCATATTTCTACCCGAATGCCTCGTGAAGCGGTGGGTAAACTaaa                                                                                                                                                                                  >  2:702996/1‑238 (MQ=255)
                                                            tATTTTCGCGTTGATTCAAGAACTGTTAATTACATATTCACGGTGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCAAGACAAATACAAAAACGGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                                                                 <  1:154220/239‑1 (MQ=255)
                                                             aagaagtgtataacggaaataagtGTTAATTAGATATTCACGGGGGAAAAAAATAAAAAACCAAATTTTTAGGGGTATTTTGTGGGGGTGAATTTATCAAGAAAAATAAAAAAACTGGAGTTGCCAGGATGAGGAAAATTAATAAACAACAGGAAGTGAATAAGTGGACAGAGATTGGCGCTAATTTAACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                                                                 <  2:120312/216‑1 (MQ=255)
                                                                                     gTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAAACAAAAACAAAAAAAGGAGTTTGCATTGTGGGGGAAAGGAAAAAAAAAAAAGGAAGGAAAAAATTGACAGAGATTTTCGCTAACCTTAACCCCAAGATTTTTTACCGAATGACTGGAGACGGGGGGGGTAAAAAAAAAAAACTTAAAGAACCCGaaaaggcc                                                                                                                                                         >  2:25389/1‑234 (MQ=255)
                                                                                         attaattatTCAGGGGGAAAAAAAATATAAAACAACATTTATAGTGGTAGTTTGTGGGGGTAAATTTTACCAGACAAATACAAAAACGGAAGTTGCCATGATGAGGAAAAGTAATAAGCAACAGGCAGTTAATAAGTTGACTGAGATGGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGa                                                                                                                                                    <  1:344051/233‑1 (MQ=255)
                                                                                          ttAAATATCCACGTTGCAAAAAATAATAAAACCACTGTATTAGTGGTAGTTTGTGTCGGTGAATTATGCCAGAAAAATACAAAAACGGGAGTTTCAAGGATGAGCAAAATTAATAAGCAACAGGAAGGTAATAGGTTGACAGAGATTGTCGATATTTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGAt                                                                                                                                                   <  2:322415/239‑1 (MQ=255)
                                                                                            aCATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAAACAAAATAAAAAAATGGAGTTGCCATGGTGTGGGGAAAGAATAAACAAAAAGAAAGGGAAAAGGTTACAAAAAATTGCGCTAAATTTTACGCCCAGATTTTTTCCCGAAAGCCTGATTGCGTGGGGGGTAAAATAAAAAAGCTAAAAGaatgtcttttttacaacact                                                                                                                                                   >  1:120312/1‑219 (MQ=255)
                                                                                               tgttcggggTGGCAAAAAATAAAAAACCAAATTGTTAGTGGTAGTTTGTGGGGGTGAATTTTCCCAAAAAAAAACAAAAACTGGTGTTGCCAGAATGAGGAAAATTAAAAAGCAACGGGCAGTGAATAGGTGGACAGAGATTGTCGTTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                                                              <  2:1045251/232‑1 (MQ=255)
                                                                                               tatTCAGGGTGGAAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGGGGCGGTAATTTTTTCCAGACAATTAAAAAAACAGGAGTGGCCATGAGGAGGAAAAGTAAAAAGAAACAGGCGGGGAAGAAATGTAAATAGGTGGCCGGAAGCTTCACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                                                              <  1:109395/239‑1 (MQ=255)
                                                                                                atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAAACAAAAAAAAAAAATTGAGTTTCCATGATGAGCGGAAAGAATAAACAAAAAGCAGTGAAAAAGATTACAGAGATTGTCGCTACATTTACCCCCATGATTTCTACCCGAAAGCCTGATGACGTGGTGGAGAAACTAAAAAAACTAAAAGAAGCCGGAACATCGTCGATggggga                                                                                                                                             >  1:958632/1‑237 (MQ=255)
                                                                                                atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAAATTGAGTTGCCATGATGAGCGCAAGTAATAAACAACAAGCAGGGGAAAAAATGACAGAGAGTTTCGCTAAATTTACCGCCATGATTTTTACCCGAATACCTGATGAAGGGGGGGGTAAACTAAAAAAACTAAAGGATGCCGAAAACACGTCGGTGGGGaa                                                                                                                                             >  1:1101168/1‑239 (MQ=255)
                                                                                                atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCTGACAAATAAAAAAAATGGGGGTGTCATTGAGGGCGGAAGGTAAAAACAAAAAGAAAAGAATAAATTTATAGAGAACGTCGCTAACTTTACACCCCAGATTTTTTACCCAAATGCTGAGGCAGGGGTGGGTAAAATAAAAAAAATTAAAGATATCCAAAAGTCGTCGAtatggga                                                                                                                                             >  2:726296/1‑233 (MQ=255)
                                                                                                atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAAACAAAAACAAAAAATGGAGTTGGCATGGTGAGCGAAAGTAATAAACAAAAAGCAGAGAAAAAAATGATAGAGATTGGCTGTAAATTTACCACCACGATTTTTACCCGAAGACCAGATGACGCGGGGGATAAACAAAAAAAAACAAAAAATTCCGACAcgtcgtacaggggggg                                                                                                                                             >  2:966271/1‑229 (MQ=255)
                                                                                                    aCGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTGGTGGCGGTGAATTTTCCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt                                                                                                                                         <  1:757226/239‑1 (MQ=255)
                                                                                                    aCGGTGGAAAAAAATAAAAACCCAAATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCAAAAAAAATAAAAAAACTGGAGTTGCCATGATGAGCAAAAGTAATAAGAAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt                                                                                                                                         <  1:470818/239‑1 (MQ=255)
                                                                                                      ggtgaaaaaaaaTAAAAAACCACATTTTTAGTGGTAGTTGGGGGCGGTGAATTTTCCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                                                                                       <  1:25389/233‑1 (MQ=255)
                                                                                                       ggggCAAAAAATATAAAACCATATTTTTGGGGGTAGGTTGGGGCGGTGAATTTTTCCAGACAAATACAAAAACGGGAGTTGCCATGAGGAGGGAAAGTAATACGCAAAGGGTAGTGAATAGGTTGACAGAGATTGTCGTTACCTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                                                                                       <  1:164518/236‑1 (MQ=255)
                                                                                                        tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAAACAAAAAAAAAAAATTGAGGTTGCCTTGGTGGGGGAAATAAAAAAAAAACAGCAAAGAATAAGGTGAACAAGATTTTCCCTTAATTTAACACCAATATTTTTAACCCGATGCCCTGTTACGGTGTGGGAAAAACAAAAAAAGTCAAAGAAACCCAAAACGCCGGCGTGGGGGAAATTAttt                                                                                                                                     >  2:285026/1‑237 (MQ=255)
                                                                                                        tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGCGAATTTTTTTAGACAAAAAAAAAAACTGGAGGTGTCATGGTGGGGGAAAGTAATAAGCAAAAAGAAAAGAAAAAATTGACAGAGATTGTCGCGAAATTTTCAACCACAATTTTTTCACGAATACCTGGTGTCGGGGGGGGTACACTCAAAAAACTAAAAAATGCCGAAAcgtcgctgagtgggtaaaaaaatc                                                                                                                                      >  2:382661/1‑220 (MQ=255)
                                                                                                              aaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCAGGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCAAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATa                                                                                                                               <  1:1124421/239‑1 (MQ=255)
                                                                                                               tgaataagaaaaaacaTTTTTAGTGGGAGTTTGTGGGGGTAAATTTTCCCAAAAAAATACAAAAACTGGAGTTGCCAGGATGAGCAAAAGTAAAAAGCAACGGGCAGTGAATAAGTTGACAGAGATTGTCGCTACCTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATa                                                                                                                               <  2:814272/226‑1 (MQ=255)
                                                                                                                aaTATAAAACCACATTTTTGGTGGTAGTTGGGGGGGGTGAATTTTTCAAAAAAAATACAAAAACTGGAGTTGCCATGAGGAGCAAAAGTAATAAGCAACAGGCAGGGAATAAGTTGAAAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                                                                             <  1:915883/239‑1 (MQ=255)
                                                                                                                       aaaCCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAAACAAAAAAAAAAAAATGAGGTGGCATGATGGGGGAAAGGAATAAAAAACAAGCAAAAAAAAAAATGAAAGAGAATGTCGCCAACTTTACACCCATGATTTCTACCCCAAAAACTGATGACGGGGGGGATAAACTAAAAAAGTCAAACAGAGCCGCAACATCGTCGGTGGGGGAAATTATATTCCCCACGAAGTTc                                                                                                                       >  2:350200/1‑239 (MQ=255)
                                                                                                                             caTTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATACAAAAACTTGAGGTTTCATGGTGCGACATAATAAAATACAAAAGACATTGAATGAGGTGTAAGAATTTCTAGCTTAAATTACCGCCCTCAGTTTTACCACCACGACTGATGACGTGGTGGATATACTCACACACCTTAATGCGGCCACAACATCGCTCGAGGGGGAAATTATAATCAATACCATGTTCTacaaa                                                                                                                 >  2:12608/1‑238 (MQ=255)
                                                                                                                             caTTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAATTGAGGTGGCATGAAGAGCGAAAGGAATAAACAAAAAGCAAAGAATAAATTGACAAAGGATTTCGCTAAATTTTCCGCCATGATTTTTACACGAAAGACCGATGACGGGGTGGGTAAAATAAAAAAACTAAAACAAAGCGAAACGGCGGCGCTGGGGGAAAATATCTAACATAcaaaggtcggaaaa                                                                                                                 >  2:842129/1‑226 (MQ=255)
                                                                                                                                       ggTAGTTTGGGGGGGGAAATTTTTCAAAAAAAAACAAAAACTGGGATTTGCAATGATGAGGAAAAGTAAAAAGAAACAGAAAGTGAATAGGTTAAAAGAGATTGCCGTTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCaaaa                                                                                                         <  2:83476/237‑1 (MQ=255)
                                                                                                                                           gtgtgggggggTAAATTTTGCAAAAAAAAAACAAAAAGTGAAGTTGCCAGGGTGAGCGAAAGTAATAAGCAAGAGGAAGTAAATAAGTGGAAGGAAATTGTCGTTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                                                    <  2:353338/229‑1 (MQ=255)
                                                                                                                                                              ttcccAGACAAATAAAAAAACTGGAGTTGCCATGGTGAGCGAAATTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg                                                                                  <  1:538631/236‑1 (MQ=255)
                                                                                                                                                                        aaTAGAAAAACAGAAGTTGCAATGAGGAGCGAAATTAATAAGCAACAGGAAGTGAATAAGTAGACAGAGATTGTCGATAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGa                                                                        <  1:884732/239‑1 (MQ=255)
                                                                                                                                                                           aCAAAAACGGGATTTGCCATGATGAGCGAAATTAATAACCACCAGGAAGTAAATAATTTGACAGAGATTGTCTCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGacac                                                                     <  1:1054575/239‑1 (MQ=255)
                                                                                                                                                                                aaaCTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCggg                                                                 >  2:55895/1‑239 (MQ=255)
                                                                                                                                                                                aaaCTGGAGTGGCGATGATGAGCGAAAGTAATAAGCAAAAGGCAGTGAAAAAGTGAACAGAGATTGACGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCggg                                                                 <  2:401234/239‑1 (MQ=255)
                                                                                                                                                                                 aaCTGGAGTTGCCATGATGAGCGAAAGTAATAACCAACAGACAGTGAATAAGTTGACAGGTATTGTCTCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                                                                <  1:915853/239‑1 (MQ=255)
                                                                                                                                                                                 aaCTGGAGTTGCCATGATGAGCGAAAATAATAAGCAACAGGCAGGGAATAAGTTGACAGAGATTGTCCCTACCTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                                                                <  1:382661/239‑1 (MQ=255)
                                                                                                                                                                                     aggtagattgacatggatgaGGAAAAGAAAAAAGCAACAGGCATGAAATAATATGACGTAGTTTGCGTCTGTCTTAACCGCCATGATTTCTACCCGAATGCCTGATGACGGGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                                                                <  2:403372/224‑1 (MQ=255)
                                                                                                                                                                                                    gatgaGCGAAAGTAATAAGCAACAGGCAGTGAATACGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAACCTAAAACAGCTAAAGGATGCCGAAACGTCGTCGCTGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACTTGAATCGTCCTGCCTGTCAGGACACCGGAGAGATTATGTTCTTCg                                                 >  2:643429/1‑239 (MQ=255)
                                                                                                                                                                                                          cGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAg                                           >  2:736753/1‑239 (MQ=255)
                                                                                                                                                                                                                          ccAGGCAGTGAATAAGTTGACAGAGAGTGTCGCTATCTTTACCGACATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTcc                            <  1:458224/238‑1 (MQ=255)
                                                                                                                                                                                                                           cacgCAGTCAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGCGGCGGATAAACTAAAACAGCTAAAGGGTGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATCGGATGTTCGACAACACGCAAAAAGCGATTGACCTGAATCACCCTGCCTGTCAGGACACAGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGATTacc                           >  2:738786/4‑239 (MQ=255)
                                                                                                                                                                                                                           cAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACACCATGCAACAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGtt                                                      >  1:475701/1‑212 (MQ=255)
                                                                                                                                                                                                                           cAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTccc                           >  1:651527/1‑239 (MQ=255)
                                                                                                                                                                                                                           cAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGCTCCCGCTTccc                           >  1:340625/1‑239 (MQ=255)
                                                                                                                                                                                                                            aGGTAGTAAATAAGTAGACAGATCTGGTCGATAACTATACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACATCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGTCCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCa                          <  2:1201146/239‑1 (MQ=255)
                                                                                                                                                                                                                            aGGCAGTGAATAAGTTGAAAGGGATGGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCa                          <  1:871326/239‑1 (MQ=255)
                                                                                                                                                                                                                                      tAATTTGAAAGATATTTTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCg                <  1:726296/239‑1 (MQ=255)
                                                                                                                                                                                                                                      aaaGTGGAAAGAGTTGGTCGTTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCg                <  1:12608/238‑1 (MQ=255)
                                                                                                                                                                                                                                                  gaTTGTCGCTAACTTTACCGCTATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGGCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCGAGCTGCAAAg      <  2:117852/237‑1 (MQ=255)
                                                                                                                                                                                                                                                   aTTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCGAGCTGCAAAGCAt   >  2:645820/1‑239 (MQ=255)
                                                                                                                                                                                                                                                   aTTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCGAGCTGCAAAGCAt   >  2:870816/1‑239 (MQ=255)
                                                                                                                                                                                                                                                    ttGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCGAGCTGCAAAGCAt   >  1:964123/1‑238 (MQ=255)
                                                                                                                                                                                                                                                    ttGTCGATACCTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCGAGCTGCAAAGCATa  <  1:285026/239‑1 (MQ=255)
                                                                                                                                                                                                                                                    ttGGCGCAAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCGAGCTGCAAAGCATa  <  1:966271/239‑1 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                               
ATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCGAGCTGCAAAGCATA  >  NC_000913/3206276‑3206748

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: