mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.32.0 revision 6ff6de7d1b87
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 20 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4400700 = | 282 (1.110) | 4 (0.020) | 4/428 | NT | 1.5% | coding (28/1281 nt) | hflX | GTPase, stimulated by 50S subunit binding, Mn(2+) homeostasis regulator |
| ? | NC_000913 | 4401207 = | 256 (1.040) | coding (535/1281 nt) | hflX | GTPase, stimulated by 50S subunit binding, Mn(2+) homeostasis regulator | |||||
| * | ? | NC_000913 | = 4297293 | 344 (1.360) | 4 (0.020) | 4/424 | NT | 1.3% | coding (2075/2148 nt) | fdhF | formate dehydrogenase‑H, selenopolypeptide subunit |
| ? | NC_000913 | = 4297566 | 282 (1.160) | coding (1802/2148 nt) | fdhF | formate dehydrogenase‑H, selenopolypeptide subunit | |||||
| * | ? | NC_000913 | = 4245106 | 294 (1.160) | 4 (0.020) | 4/420 | NT | 1.4% | noncoding (16/126 nt) | REP315 (repetitive extragenic palindromic) element, contains 3 REP sequences | REP315 (repetitive extragenic palindromic) element, contains 3 REP sequences |
| ? | NC_000913 | = 4245112 | 287 (1.190) | noncoding (22/126 nt) | REP315 (repetitive extragenic palindromic) element, contains 3 REP sequences | REP315 (repetitive extragenic palindromic) element, contains 3 REP sequences | |||||
| * | ? | NC_000913 | = 3856270 | 322 (1.270) | 5 (0.020) | 5/424 | NT | 1.6% | coding (37/348 nt) | yidH | DUF202 family inner membrane protein |
| ? | NC_000913 | = 3856279 | 323 (1.330) | coding (28/348 nt) | yidH | DUF202 family inner membrane protein | |||||
| * | ? | NC_000913 | 3822563 = | 313 (1.240) | 4 (0.020) | 3/426 | NT | 1.2% | coding (165/2109 nt) | spoT | bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase |
| ? | NC_000913 | 3823237 = | 344 (1.400) | coding (839/2109 nt) | spoT | bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase | |||||
| * | ? | NC_000913 | 3763859 = | 41 (0.160) | 4 (0.020) | 3/418 | NT | 3.5% | coding (1678/4134 nt) | rhsA | Rhs protein with putative toxin 55 domain, putative polysaccharide synthesis/export protein, putative neighboring cell growth inhibitor |
| ? | NC_000913 | 3763999 = | 184 (0.770) | coding (1818/4134 nt) | rhsA | Rhs protein with putative toxin 55 domain, putative polysaccharide synthesis/export protein, putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | 3620997 = | 166 (0.660) | 4 (0.020) | 3/418 | NT | 3.9% | coding (1807/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain, putative neighboring cell growth inhibitor |
| ? | NC_000913 | 3763870 = | 41 (0.170) | coding (1689/4134 nt) | rhsA | Rhs protein with putative toxin 55 domain, putative polysaccharide synthesis/export protein, putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | 3620868 = | 47 (0.190) | 4 (0.020) | 3/418 | NT | 3.4% | coding (1678/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain, putative neighboring cell growth inhibitor |
| ? | NC_000913 | 3763999 = | 184 (0.770) | coding (1818/4134 nt) | rhsA | Rhs protein with putative toxin 55 domain, putative polysaccharide synthesis/export protein, putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | 3620868 = | 47 (0.190) | 4 (0.020) | 3/418 | NT | 3.7% | coding (1678/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain, putative neighboring cell growth inhibitor |
| ? | NC_000913 | 3621008 = | 166 (0.690) | coding (1818/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain, putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | 3417234 = | 296 (1.170) | 5 (0.020) | 3/428 | NT | 1.8% | coding (2204/3105 nt) | acrF | multidrug efflux system protein |
| ? | NC_000913 | 3417587 = | 270 (1.100) | coding (2557/3105 nt) | acrF | multidrug efflux system protein | |||||