| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,567,818 | T→A | 8.2% | I336F (ATT→TTT) | yddW ← | liprotein, glycosyl hydrolase homolog |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,567,818 | 0 | T | A | 8.2% | 252.6 / 2.3 | 74 | I336F (ATT→TTT) | yddW | liprotein, glycosyl hydrolase homolog |
| Reads supporting (aligned to +/- strand): ref base T (20/47); new base A (5/2); total (25/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.98e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGCCGCTAATTTCGGGCACAGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTAACTGCTGAGTATTGTTGCGCCGCCAGTCTGCTTTTGACGCAAATGCGCCTC > NC_000913/1567587‑1568054 | tGCCGCTAATTTCGGGCACAGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGGTTTACTAAATACGCCCCCCCTTTTTCCCACACGCCCTAAACCGCGGCACTCCC‑TGAGAACGGCCC‑GTAAATTTTGGGGGCAATGTAATcc > 2:20107/1‑239 (MQ=255) cacaGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTcc < 2:869298/238‑1 (MQ=255) acaGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCAc < 2:805012/239‑1 (MQ=255) cGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGa < 2:542213/239‑1 (MQ=255) aTCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGGCCTGGG‑CGGTTTTACGACAACCGCCCCCCACTTTTCTACCACATCCTAAAGAGCGGCCCCCCC‑CGAGAACGGCGC‑GTAACTTTTGGGTGGAAAGGTATCCACCAACCCTTGTTTCCCCCCTCGACGGgggt > 1:421924/1‑239 (MQ=255) tggggcggctTTTGCAGATCCTGTCCGCCGCTGTTAATCATCCAGTCTGGCTCTAACTTTGAAGGTTCCCCCACTGTATAGAAGGCGGTAACGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACTATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCGTGTTCCACCCATCGACGGgtgt < 1:84544/231‑1 (MQ=255) gctTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGGCCCCGTCCGGTTTAA‑GAAATACGCCCCCCACTTTTTCAACACGTCATAACAAGCGGCCCCCCT‑GGGGCACCGCCACGACAATTTGGGG‑GAAAAGTAATTAAGCAATCCCTGTTTCACCCCTCGCCgcggggatacggag > 1:878543/1‑226 (MQ=255) ttttCAGTTCCCGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTGTGAAGGTTCACCCACTTTATAGAAGGCGATTCCGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGAt < 2:183166/239‑1 (MQ=255) ttttCAGTACCGGGTCGCCGCCGTTAATCACCCAGTCTGGCTCTATCTTTGAAGGTTCACCCACTTTATAGAGGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGAt < 1:1179744/239‑1 (MQ=255) cgccgcCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGTTTTACGACAACCGCCCCCCATTTTTCCAACCCATCCTAACGCGCGGCGCTCCGCTGGGAAC‑GCCC‑GGAAATTTTGGGAGCAAAGGAAATCACCAATCCTTGTTTCTCCCCTCGACGGGGGGCCGCCTAGGATTCGGTATAGCCTgg > 1:190039/1‑237 (MQ=255) cgTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCt < 2:930000/239‑1 (MQ=255) ttAATCATCCAGTCTGGCTCTATCGTTGAAGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCg < 2:255505/239‑1 (MQ=255) atcCAGTCTGGCTCTATCTTTGAAGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACg < 2:862969/194‑1 (MQ=255) gAAGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGa < 2:1136760/239‑1 (MQ=255) aGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGAt < 2:878543/238‑1 (MQ=255) aGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGAt < 2:1047734/238‑1 (MQ=255) ttCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGGTTTACGACATCCGCCCACCATTTTTCCCACACGGCATAACGCGCGGCACTCCC‑GGGGAACGGCCA‑GCAAATTTTGGGGGGAATGTCATTCAACAATCCTTGTTTCCCCCACCGGCGGGGGGTAGCGTGAGGTTCGTCCGAGGCTGCCGCCCCTCCGCGATCGGGACCGGGCGGAtgggtggattggt > 1:1047734/1‑227 (MQ=255) tttATAGAAGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAg < 2:867818/213‑1 (MQ=255) tttATAGAAGGCGATACCGATATACAGGCGGGGCCTGGT‑CGGTTTTAACACATCCCCCCCCCCCTTTTTCAAAACCTCCTAAAACGCGGCCCTCCC‑TGCGGACAGCCA‑GTAAATTTGGGGGGGAAAGTAATCCAGCAAACCCTTTTTCCCCCACCACCCGGGGTCCGCGCAGGATTTGTCATAGGCTTCCCCCCCCCGCGTATCGGAACCGAGCGGAGCgtgcgtactgttctgcccc > 1:371957/1‑222 (MQ=255) ttATAGAAGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTTGCCAACCAGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCGCCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCacac < 2:729629/239‑1 (MQ=255) aaGGCGATCCCGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGc < 1:20107/239‑1 (MQ=255) aaGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCTTAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCTGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGc < 2:697489/239‑1 (MQ=255) aGGCGAGACCTATATACGGGCGGGTCCTGGG‑CGGTTTAACGACAGCCGCCCACCATTGTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGc < 1:882054/238‑1 (MQ=255) tCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTGGCCAACACGTCATAACGCGCGGCACGCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTcc < 1:1029155/238‑1 (MQ=255) gT‑CGGTTTAACGACATCCGCCCACCATTTTGACAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGTCTGCCGCGCCTCGGGTATCGGAACCGAGCGGAACGTGTGATTGGTTACGCAACATGCCCGCCGGGCTAACACCAACTTCGACTCCCGGCtt > 1:964703/1‑239 (MQ=255) cGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTa < 2:190039/238‑1 (MQ=255) cGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTa < 2:1044698/238‑1 (MQ=255) cGGTTCAACGACATCCGCCCACCATTTTTCCAACACGTCATACCGCGCGGCACGCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTa < 1:317329/238‑1 (MQ=255) cGGTGTAACGTCATCCGCCTCCCATTTTGTCAACACGTCGTAACGCGCGGCACCCCC‑GTATAACGGCCT‑GTAAATGTGGTGAGCAATGGAATACAGCAATCCTTGTTCCGCTCAACGACGGGTGCCAGCGTAGGATTCGTCATAGGCTGCCGCGCCCCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCGTGCCTGGCTAACACCAAATTCGACTCCCGGCTTa < 1:63688/238‑1 (MQ=255) ggTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCGCCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAAt < 1:166952/239‑1 (MQ=255) ggTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAAt < 2:821592/239‑1 (MQ=255) ggTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAAt < 2:457833/239‑1 (MQ=255) ggTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGAAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCAGGCTTAAt < 1:1060638/239‑1 (MQ=255) ggTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGAGGGTCACGCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAAGCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAAt < 2:710392/239‑1 (MQ=255) ggTTAAACCACATCCGCCCACCAGTTTGCCAACAGCTCATAACGCGCGGCGCCCCG‑GAAGAACGGCCA‑GTAAATTTGGGGAGGAAAGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGGCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTTTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAAt < 1:673601/239‑1 (MQ=255) gTTTAACGAAATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAAt < 1:528144/238‑1 (MQ=255) tttAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGtgtg > 2:445215/1‑182 (MQ=255) tttAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGtgtg < 1:445215/182‑1 (MQ=255) tttAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGGCTCGGAACCGAGCGGATCGTGTGATAGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGCCTTAAt > 2:673601/1‑237 (MQ=255) gACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTaa < 2:12587/239‑1 (MQ=255) cATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATg < 2:1035307/239‑1 (MQ=255) aTCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATgg < 2:762215/239‑1 (MQ=255) aTCCGCCCAACATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATgg < 2:1117521/239‑1 (MQ=255) tCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCg < 2:203875/146‑1 (MQ=255) tCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCg > 1:203875/1‑146 (MQ=255) tCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACCCGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGgt > 1:964533/1‑239 (MQ=255) tCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGgt > 2:329657/1‑239 (MQ=255) tCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGgt > 1:29755/1‑239 (MQ=255) tCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGgt > 2:851778/1‑239 (MQ=255) accaTTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAGCGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGAt < 1:422552/239‑1 (MQ=255) accaTTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGAt < 2:421924/239‑1 (MQ=255) caTTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATAc < 1:329657/239‑1 (MQ=255) ttttGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCt < 2:597633/239‑1 (MQ=255) acacGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAAAGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGa > 1:557916/1‑154 (MQ=255) acacGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAAAGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGa < 2:557916/154‑1 (MQ=255) cATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGATCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCTGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTAActg < 2:1112431/238‑1 (MQ=255) cATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTAActg < 2:1115216/238‑1 (MQ=255) aTACCGCGCCGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTAGCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTAActgct < 2:513677/239‑1 (MQ=255) aTAACGCGCGGCACGCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATTTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGTACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTAActgct < 2:964703/239‑1 (MQ=255) cgcgGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTACCTGCTGAGTAt > 2:156644/1‑239 (MQ=255) gcgGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGCTACCTTTGACATTAACTTCTGAGTAtt > 1:19967/1‑239 (MQ=255) cgggagaACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTAACTGCTGAGTATTGTTGcgccg < 2:621152/236‑1 (MQ=255) gagaACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTAACTGCTGAGTATTGTTGCGCCGCCa > 2:607058/1‑239 (MQ=255) gagaACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTAACTGCTGAGTATTGTTGCGCCGCCa > 2:32804/1‑239 (MQ=255) cGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTAACTGCTGAGTATTGTTGCGCCGCCAGTCt > 2:253175/1‑238 (MQ=255) cGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTAACTGCTGAGTATTGTTGCGCCGCCAGTCt > 1:626240/1‑238 (MQ=255) gCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATgg > 2:857715/1‑186 (MQ=255) gCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATgg < 1:857715/186‑1 (MQ=255) aTTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTAACTGCTGAGTATTGTTGCGCCGCCAGTCTGCTTTTGACGc < 2:591536/239‑1 (MQ=255) gAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTAACTGCTGAGTATTGTTGCGCCGCCAGTCTGCTTTTGACGCAAATgc > 2:355732/1‑238 (MQ=255) gCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTAACTGCTGAGTATTGTTGCGCCGCCAGTCTGCTTTTGACGCAAATgcgc > 2:822042/1‑238 (MQ=255) aaTGTAATCCATCCATCCTTGTCCCGCCTAGCAGCGGGTGTAAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTAACTGCTGAGTATTGTTGCGCCGCCAGTCTGCTTTTGACGCAAATGCGCCTc < 1:754124/239‑1 (MQ=255) aaTGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTAACTGCTGAGTATTGTTGCGCCGCCAGTCTGCTTTTGACGCAAATGCGCCt > 1:1082097/1‑238 (MQ=255) aaTGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTAACTGCTGAGTATTGTTGCGCCGCCAGTCTGCTTTTGACGCAAATGCGCCTc < 2:29755/239‑1 (MQ=255) | TGCCGCTAATTTCGGGCACAGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGT‑CGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCACTCCG‑TGAGAACGGCCA‑GTAAATTTGGGGAGCAATGTAATCCAGCAATCCTTGTTCCACCCATCGACGGGTGTCAGCGTAGGATTCGTCATAGGCTGCCGCGCCTCGGGTATCGGAACCGAGCGGATCGTGTGATCGGTTACGCCACACGCCTGCCGGGCTAACACCAAATTCGACTCCCGGCTTAATGCTTTTAATGGTGTGCGATACCTTTGCAATTAACTGCTGAGTATTGTTGCGCCGCCAGTCTGCTTTTGACGCAAATGCGCCTC > NC_000913/1567587‑1568054 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |